RNA–Protein interactions for RNA: ENST00000467540.5

UFC1-203, Transcript of ubiquitin-fold modifier conjugating enzyme 1, humanhuman

TSL 5

Gene UFC1, Length 803 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFC1-203ENST00000467540 NISCHQ9Y2I1 1504 aa28.65■■■□□ 2.18
UFC1-203ENST00000467540 CCDC180Q9P1Z9 1646 aa25.59■■□□□ 1.69
UFC1-203ENST00000467540 ABCC9O60706 1549 aa25.26■■□□□ 1.63
UFC1-203ENST00000467540 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
UFC1-203ENST00000467540 NACADO15069 1562 aa24.12■■□□□ 1.45
UFC1-203ENST00000467540 MYO15BQ96JP2 1530 aa23.94■■□□□ 1.42
UFC1-203ENST00000467540 ZCCHC6Q5VYS8 1495 aaKnown RBP23.84■■□□□ 1.41
UFC1-203ENST00000467540 DCAF8L2P0C7V8 631 aa23.84■■□□□ 1.41
UFC1-203ENST00000467540 DCAF1Q9Y4B6 1507 aa23.73■■□□□ 1.39
UFC1-203ENST00000467540 UNC13AQ9UPW8 1703 aa23.68■■□□□ 1.38
UFC1-203ENST00000467540 BICRAQ9NZM4 1560 aa23.55■■□□□ 1.36
UFC1-203ENST00000467540 PABPN1Q86U42 306 aaKnown RBP eCLIP23.53■■□□□ 1.36
UFC1-203ENST00000467540 DNAJC5BQ9UF47 199 aa23.48■■□□□ 1.35
UFC1-203ENST00000467540 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
UFC1-203ENST00000467540 SHROOM4Q9ULL8 1493 aa23.25■■□□□ 1.31
UFC1-203ENST00000467540 EIF4G1Q04637 1599 aaKnown RBP22.9■■□□□ 1.26
UFC1-203ENST00000467540 CC2D2AQ9P2K1 1620 aa22.86■■□□□ 1.25
UFC1-203ENST00000467540 CECR2Q9BXF3 1484 aa22.73■■□□□ 1.23
UFC1-203ENST00000467540 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
UFC1-203ENST00000467540 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
UFC1-203ENST00000467540 ATAD2BQ9ULI0 1458 aa22.25■■□□□ 1.15
UFC1-203ENST00000467540 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
UFC1-203ENST00000467540 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
UFC1-203ENST00000467540 HMGXB3Q12766 1538 aa22.15■■□□□ 1.14
UFC1-203ENST00000467540 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
UFC1-203ENST00000467540 MROH2BQ7Z745 1585 aa22.08■■□□□ 1.13
UFC1-203ENST00000467540 BAZ1BQ9UIG0 1483 aaKnown RBP22■■□□□ 1.11
UFC1-203ENST00000467540 NESP48681 1621 aa21.81■■□□□ 1.08
UFC1-203ENST00000467540 WIZO95785 1651 aa21.81■■□□□ 1.08
UFC1-203ENST00000467540 ERCC6Q03468 1493 aa21.74■■□□□ 1.07
UFC1-203ENST00000467540 RSF1Q96T23 1441 aaPredicted RBP21.72■■□□□ 1.07
UFC1-203ENST00000467540 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
UFC1-203ENST00000467540 CUX2O14529 1486 aa21.69■■□□□ 1.06
UFC1-203ENST00000467540 THOC2Q8NI27 1593 aaKnown RBP21.58■■□□□ 1.05
UFC1-203ENST00000467540 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.04
UFC1-203ENST00000467540 CADPSQ9ULU8 1353 aa21.58■■□□□ 1.04
UFC1-203ENST00000467540 KIF21AQ7Z4S6 1674 aa21.54■■□□□ 1.04
UFC1-203ENST00000467540 PDS5BQ9NTI5 1447 aa21.53■■□□□ 1.04
UFC1-203ENST00000467540 CFTRP13569 1480 aa21.43■■□□□ 1.02
UFC1-203ENST00000467540 MRC2Q9UBG0 1479 aa21.37■■□□□ 1.01
UFC1-203ENST00000467540 WDR62O43379 1518 aa21.34■■□□□ 1.01
UFC1-203ENST00000467540 FANCD2Q9BXW9 1451 aa21.32■■□□□ 1
UFC1-203ENST00000467540 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
UFC1-203ENST00000467540 DNAJC5Q9H3Z4 198 aa21.31■■□□□ 1
UFC1-203ENST00000467540 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
UFC1-203ENST00000467540 PRDM2Q13029 1718 aa21.22■□□□□ 0.99
UFC1-203ENST00000467540 URB2Q14146 1524 aaKnown RBP21.17■□□□□ 0.98
UFC1-203ENST00000467540 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
UFC1-203ENST00000467540 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
UFC1-203ENST00000467540 ABCC8Q09428 1581 aa20.91■□□□□ 0.94
UFC1-203ENST00000467540 IFT140Q96RY7 1462 aa20.9■□□□□ 0.94
UFC1-203ENST00000467540 ZNF608Q9ULD9 1512 aaPredicted RBP20.85■□□□□ 0.93
UFC1-203ENST00000467540 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
UFC1-203ENST00000467540 TARBP1Q13395 1621 aaKnown RBP20.8■□□□□ 0.92
UFC1-203ENST00000467540 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
UFC1-203ENST00000467540 EIF4G3O43432 1585 aaKnown RBP20.75■□□□□ 0.91
UFC1-203ENST00000467540 CUX1P39880 1505 aa20.73■□□□□ 0.91
UFC1-203ENST00000467540 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
UFC1-203ENST00000467540 FGD5Q6ZNL6 1462 aa20.68■□□□□ 0.9
UFC1-203ENST00000467540 AQRO60306 1485 aaKnown RBP eCLIP20.66■□□□□ 0.9
UFC1-203ENST00000467540 OSCARQ8IYS5 282 aa20.65■□□□□ 0.9
UFC1-203ENST00000467540 SOGA1O94964 1423 aa20.63■□□□□ 0.89
UFC1-203ENST00000467540 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
UFC1-203ENST00000467540 TDRD9Q8NDG6 1382 aaKnown RBP20.56■□□□□ 0.88
UFC1-203ENST00000467540 CHD1O14646 1710 aa20.53■□□□□ 0.88
UFC1-203ENST00000467540 ABCA10Q8WWZ4 1543 aa20.49■□□□□ 0.87
UFC1-203ENST00000467540 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
UFC1-203ENST00000467540 SNAPC4Q5SXM2 1469 aa20.48■□□□□ 0.87
UFC1-203ENST00000467540 TOP2BQ02880 1626 aa20.47■□□□□ 0.87
UFC1-203ENST00000467540 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
UFC1-203ENST00000467540 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.86
UFC1-203ENST00000467540 GRIN2BQ13224 1484 aa20.45■□□□□ 0.86
UFC1-203ENST00000467540 ABCA5Q8WWZ7 1642 aa20.45■□□□□ 0.86
UFC1-203ENST00000467540 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
UFC1-203ENST00000467540 RIMBP3CA6NJZ7 1639 aa20.44■□□□□ 0.86
UFC1-203ENST00000467540 RIMBP3BA6NNM3 1639 aa20.44■□□□□ 0.86
UFC1-203ENST00000467540 RIMBP3Q9UFD9 1639 aa20.44■□□□□ 0.86
UFC1-203ENST00000467540 GAPVD1Q14C86 1478 aa20.42■□□□□ 0.86
UFC1-203ENST00000467540 ARHGEF11O15085 1522 aa20.41■□□□□ 0.86
UFC1-203ENST00000467540 PBRM1Q86U86 1689 aa20.41■□□□□ 0.86
UFC1-203ENST00000467540 TRIM41Q8WV44 630 aa20.4■□□□□ 0.86
UFC1-203ENST00000467540 SYNJ2O15056 1496 aa20.36■□□□□ 0.85
UFC1-203ENST00000467540 CLASP1Q7Z460 1538 aa20.35■□□□□ 0.85
UFC1-203ENST00000467540 FBLN2P98095 1184 aa20.34■□□□□ 0.85
UFC1-203ENST00000467540 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
UFC1-203ENST00000467540 ADAMTS12P58397 1594 aa20.26■□□□□ 0.83
UFC1-203ENST00000467540 ARAP1Q96P48 1450 aa20.25■□□□□ 0.83
UFC1-203ENST00000467540 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
UFC1-203ENST00000467540 GRIN2AQ12879 1464 aa20.21■□□□□ 0.83
UFC1-203ENST00000467540 FHAD1B1AJZ9 1412 aa20.18■□□□□ 0.82
UFC1-203ENST00000467540 NUP160Q12769 1436 aa20.17■□□□□ 0.82
UFC1-203ENST00000467540 CEP170Q5SW79 1584 aa20.14■□□□□ 0.81
UFC1-203ENST00000467540 CYB5RLQ6IPT4 315 aa20.14■□□□□ 0.81
UFC1-203ENST00000467540 SHROOM2Q13796 1616 aa20.05■□□□□ 0.8
UFC1-203ENST00000467540 ERCC6L2Q5T890 1561 aa20.04■□□□□ 0.8
UFC1-203ENST00000467540 KIF27Q86VH2 1401 aa20.02■□□□□ 0.8
UFC1-203ENST00000467540 IGF1RP08069 1367 aa20.02■□□□□ 0.8
UFC1-203ENST00000467540 RUSC2Q8N2Y8 1516 aa19.97■□□□□ 0.79
UFC1-203ENST00000467540 CUL7Q14999 1698 aa19.97■□□□□ 0.79
UFC1-203ENST00000467540 PRG4Q92954 1404 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms