Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.33■■□□□ 1.17
COPS3Q9UNS2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
COPS3Q9UNS2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
COPS3Q9UNS2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
COPS3Q9UNS2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COPS3Q9UNS2 AC108673.1-201ENST00000510422 1159 ntBASIC22.32■■□□□ 1.16
COPS3Q9UNS2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COPS3Q9UNS2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.32■■□□□ 1.16
COPS3Q9UNS2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.31■■□□□ 1.16
COPS3Q9UNS2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COPS3Q9UNS2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
COPS3Q9UNS2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COPS3Q9UNS2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COPS3Q9UNS2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COPS3Q9UNS2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
COPS3Q9UNS2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.3■■□□□ 1.16
COPS3Q9UNS2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
COPS3Q9UNS2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
COPS3Q9UNS2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COPS3Q9UNS2 LINC00273-201ENST00000539813 1452 ntBASIC22.29■■□□□ 1.16
COPS3Q9UNS2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COPS3Q9UNS2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
COPS3Q9UNS2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COPS3Q9UNS2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COPS3Q9UNS2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
COPS3Q9UNS2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COPS3Q9UNS2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COPS3Q9UNS2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
COPS3Q9UNS2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COPS3Q9UNS2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
COPS3Q9UNS2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COPS3Q9UNS2 DUX4L28-201ENST00000623687 678 ntBASIC22.28■■□□□ 1.16
COPS3Q9UNS2 AL449106.1-201ENST00000608517 1980 ntBASIC22.28■■□□□ 1.16
COPS3Q9UNS2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.28■■□□□ 1.16
COPS3Q9UNS2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
COPS3Q9UNS2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COPS3Q9UNS2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.26■■□□□ 1.15
COPS3Q9UNS2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COPS3Q9UNS2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COPS3Q9UNS2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
COPS3Q9UNS2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.26■■□□□ 1.15
COPS3Q9UNS2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
COPS3Q9UNS2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COPS3Q9UNS2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COPS3Q9UNS2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COPS3Q9UNS2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COPS3Q9UNS2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COPS3Q9UNS2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COPS3Q9UNS2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
COPS3Q9UNS2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COPS3Q9UNS2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.24■■□□□ 1.15
COPS3Q9UNS2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
COPS3Q9UNS2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COPS3Q9UNS2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.23■■□□□ 1.15
COPS3Q9UNS2 AC091060.1-201ENST00000623524 1766 ntBASIC22.22■■□□□ 1.15
COPS3Q9UNS2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COPS3Q9UNS2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.22■■□□□ 1.15
COPS3Q9UNS2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COPS3Q9UNS2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
COPS3Q9UNS2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.21■■□□□ 1.15
COPS3Q9UNS2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COPS3Q9UNS2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.2■■□□□ 1.14
COPS3Q9UNS2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COPS3Q9UNS2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COPS3Q9UNS2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
COPS3Q9UNS2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COPS3Q9UNS2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
COPS3Q9UNS2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.18■■□□□ 1.14
COPS3Q9UNS2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.18■■□□□ 1.14
COPS3Q9UNS2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COPS3Q9UNS2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COPS3Q9UNS2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COPS3Q9UNS2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.18■■□□□ 1.14
COPS3Q9UNS2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
COPS3Q9UNS2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
COPS3Q9UNS2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COPS3Q9UNS2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
COPS3Q9UNS2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COPS3Q9UNS2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.16■■□□□ 1.14
COPS3Q9UNS2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.16■■□□□ 1.14
COPS3Q9UNS2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.16■■□□□ 1.14
COPS3Q9UNS2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
COPS3Q9UNS2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COPS3Q9UNS2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COPS3Q9UNS2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COPS3Q9UNS2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COPS3Q9UNS2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
COPS3Q9UNS2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
COPS3Q9UNS2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.14■■□□□ 1.13
COPS3Q9UNS2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
COPS3Q9UNS2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.14■■□□□ 1.13
COPS3Q9UNS2 MIR3665-201ENST00000578708 105 ntBASIC22.13■■□□□ 1.13
COPS3Q9UNS2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.13■■□□□ 1.13
COPS3Q9UNS2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.13■■□□□ 1.13
COPS3Q9UNS2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.12■■□□□ 1.13
COPS3Q9UNS2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COPS3Q9UNS2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
COPS3Q9UNS2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COPS3Q9UNS2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COPS3Q9UNS2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms