Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RNF5Q99942 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF5Q99942 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF5Q99942 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF5Q99942 DUX4L11-201ENST00000611504 1267 ntBASIC20.17■□□□□ 0.82
RNF5Q99942 DUX4L12-201ENST00000614593 1267 ntBASIC20.17■□□□□ 0.82
RNF5Q99942 DUX4L14-201ENST00000621227 1267 ntBASIC20.17■□□□□ 0.82
RNF5Q99942 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF5Q99942 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF5Q99942 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF5Q99942 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.16■□□□□ 0.82
RNF5Q99942 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF5Q99942 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RNF5Q99942 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF5Q99942 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF5Q99942 ABHD17AP4-201ENST00000411545 909 ntBASIC20.15■□□□□ 0.82
RNF5Q99942 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RNF5Q99942 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF5Q99942 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF5Q99942 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF5Q99942 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF5Q99942 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF5Q99942 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF5Q99942 AC008813.1-201ENST00000536597 885 ntBASIC20.13■□□□□ 0.81
RNF5Q99942 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF5Q99942 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF5Q99942 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF5Q99942 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF5Q99942 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF5Q99942 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF5Q99942 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF5Q99942 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF5Q99942 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF5Q99942 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF5Q99942 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF5Q99942 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF5Q99942 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF5Q99942 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RNF5Q99942 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF5Q99942 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RNF5Q99942 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF5Q99942 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF5Q99942 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF5Q99942 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RNF5Q99942 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF5Q99942 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF5Q99942 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF5Q99942 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF5Q99942 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RNF5Q99942 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF5Q99942 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF5Q99942 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.08■□□□□ 0.8
RNF5Q99942 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RNF5Q99942 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF5Q99942 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF5Q99942 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF5Q99942 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF5Q99942 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF5Q99942 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF5Q99942 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RNF5Q99942 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF5Q99942 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF5Q99942 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF5Q99942 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF5Q99942 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF5Q99942 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF5Q99942 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF5Q99942 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF5Q99942 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF5Q99942 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF5Q99942 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF5Q99942 AL121749.1-202ENST00000609313 2153 ntBASIC20.03■□□□□ 0.8
RNF5Q99942 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF5Q99942 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF5Q99942 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF5Q99942 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RNF5Q99942 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RNF5Q99942 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF5Q99942 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF5Q99942 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF5Q99942 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF5Q99942 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
RNF5Q99942 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF5Q99942 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF5Q99942 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF5Q99942 AC148477.6-201ENST00000623746 465 ntBASIC20.01■□□□□ 0.79
RNF5Q99942 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20■□□□□ 0.79
RNF5Q99942 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20■□□□□ 0.79
RNF5Q99942 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF5Q99942 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RNF5Q99942 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF5Q99942 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20■□□□□ 0.79
RNF5Q99942 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF5Q99942 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF5Q99942 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF5Q99942 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RNF5Q99942 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF5Q99942 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF5Q99942 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF5Q99942 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms