Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF48Q96MX3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF48Q96MX3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF48Q96MX3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF48Q96MX3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF48Q96MX3 NTF6A-201ENST00000591175 560 ntBASIC20.52■□□□□ 0.88
ZNF48Q96MX3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF48Q96MX3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF48Q96MX3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF48Q96MX3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF48Q96MX3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF48Q96MX3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF48Q96MX3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF48Q96MX3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.5■□□□□ 0.87
ZNF48Q96MX3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF48Q96MX3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
ZNF48Q96MX3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF48Q96MX3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ZNF48Q96MX3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF48Q96MX3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF48Q96MX3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF48Q96MX3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF48Q96MX3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
ZNF48Q96MX3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF48Q96MX3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF48Q96MX3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.48■□□□□ 0.87
ZNF48Q96MX3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF48Q96MX3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF48Q96MX3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ZNF48Q96MX3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF48Q96MX3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF48Q96MX3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.47■□□□□ 0.87
ZNF48Q96MX3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF48Q96MX3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF48Q96MX3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
ZNF48Q96MX3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF48Q96MX3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF48Q96MX3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.46■□□□□ 0.87
ZNF48Q96MX3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF48Q96MX3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF48Q96MX3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF48Q96MX3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF48Q96MX3 AC012354.3-201ENST00000623734 483 ntBASIC20.44■□□□□ 0.86
ZNF48Q96MX3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF48Q96MX3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF48Q96MX3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF48Q96MX3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.42■□□□□ 0.86
ZNF48Q96MX3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF48Q96MX3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF48Q96MX3 AC092296.2-201ENST00000589470 999 ntBASIC20.42■□□□□ 0.86
ZNF48Q96MX3 U85056.1-201ENST00000616429 682 ntBASIC20.42■□□□□ 0.86
ZNF48Q96MX3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF48Q96MX3 AC139426.1-201ENST00000568218 2529 ntBASIC20.41■□□□□ 0.86
ZNF48Q96MX3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF48Q96MX3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.41■□□□□ 0.86
ZNF48Q96MX3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.41■□□□□ 0.86
ZNF48Q96MX3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.41■□□□□ 0.86
ZNF48Q96MX3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.41■□□□□ 0.86
ZNF48Q96MX3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF48Q96MX3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF48Q96MX3 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.4■□□□□ 0.86
ZNF48Q96MX3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF48Q96MX3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF48Q96MX3 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.4■□□□□ 0.86
ZNF48Q96MX3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
ZNF48Q96MX3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF48Q96MX3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF48Q96MX3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF48Q96MX3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.39■□□□□ 0.85
ZNF48Q96MX3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF48Q96MX3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF48Q96MX3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.37■□□□□ 0.85
ZNF48Q96MX3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF48Q96MX3 AL139393.2-201ENST00000608721 2025 ntBASIC20.37■□□□□ 0.85
ZNF48Q96MX3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF48Q96MX3 AP004833.2-201ENST00000532228 1454 ntBASIC20.37■□□□□ 0.85
ZNF48Q96MX3 AC100797.4-201ENST00000631653 1827 ntBASIC20.37■□□□□ 0.85
ZNF48Q96MX3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.36■□□□□ 0.85
ZNF48Q96MX3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF48Q96MX3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.36■□□□□ 0.85
ZNF48Q96MX3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF48Q96MX3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF48Q96MX3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ZNF48Q96MX3 AC018358.1-201ENST00000631079 1402 ntBASIC20.36■□□□□ 0.85
ZNF48Q96MX3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF48Q96MX3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.35■□□□□ 0.85
ZNF48Q96MX3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ZNF48Q96MX3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF48Q96MX3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF48Q96MX3 ECEL1P2-201ENST00000461596 1295 ntBASIC20.34■□□□□ 0.85
ZNF48Q96MX3 AL033527.3-201ENST00000566366 1196 ntBASIC20.34■□□□□ 0.85
ZNF48Q96MX3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ZNF48Q96MX3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF48Q96MX3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF48Q96MX3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF48Q96MX3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF48Q96MX3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ZNF48Q96MX3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.33■□□□□ 0.85
ZNF48Q96MX3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ZNF48Q96MX3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms