Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APOBEC3DQ96AK3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APOBEC3DQ96AK3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
APOBEC3DQ96AK3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
APOBEC3DQ96AK3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
APOBEC3DQ96AK3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.79■■□□□ 1.08
APOBEC3DQ96AK3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.79■■□□□ 1.08
APOBEC3DQ96AK3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
APOBEC3DQ96AK3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APOBEC3DQ96AK3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
APOBEC3DQ96AK3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
APOBEC3DQ96AK3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APOBEC3DQ96AK3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.77■■□□□ 1.08
APOBEC3DQ96AK3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
APOBEC3DQ96AK3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.77■■□□□ 1.08
APOBEC3DQ96AK3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.77■■□□□ 1.08
APOBEC3DQ96AK3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
APOBEC3DQ96AK3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
APOBEC3DQ96AK3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
APOBEC3DQ96AK3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APOBEC3DQ96AK3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APOBEC3DQ96AK3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.76■■□□□ 1.07
APOBEC3DQ96AK3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.76■■□□□ 1.07
APOBEC3DQ96AK3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.76■■□□□ 1.07
APOBEC3DQ96AK3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
APOBEC3DQ96AK3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APOBEC3DQ96AK3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
APOBEC3DQ96AK3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APOBEC3DQ96AK3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
APOBEC3DQ96AK3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APOBEC3DQ96AK3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
APOBEC3DQ96AK3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
APOBEC3DQ96AK3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
APOBEC3DQ96AK3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.74■■□□□ 1.07
APOBEC3DQ96AK3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
APOBEC3DQ96AK3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
APOBEC3DQ96AK3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
APOBEC3DQ96AK3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APOBEC3DQ96AK3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
APOBEC3DQ96AK3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
APOBEC3DQ96AK3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
APOBEC3DQ96AK3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.73■■□□□ 1.07
APOBEC3DQ96AK3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APOBEC3DQ96AK3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APOBEC3DQ96AK3 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.72■■□□□ 1.07
APOBEC3DQ96AK3 AC008813.1-201ENST00000536597 885 ntBASIC21.72■■□□□ 1.07
APOBEC3DQ96AK3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
APOBEC3DQ96AK3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
APOBEC3DQ96AK3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APOBEC3DQ96AK3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
APOBEC3DQ96AK3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
APOBEC3DQ96AK3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APOBEC3DQ96AK3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
APOBEC3DQ96AK3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.7■■□□□ 1.06
APOBEC3DQ96AK3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
APOBEC3DQ96AK3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
APOBEC3DQ96AK3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
APOBEC3DQ96AK3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
APOBEC3DQ96AK3 MIR7108-201ENST00000614319 87 ntBASIC21.69■■□□□ 1.06
APOBEC3DQ96AK3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
APOBEC3DQ96AK3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
APOBEC3DQ96AK3 CR559946.2-201ENST00000623684 991 ntBASIC21.68■■□□□ 1.06
APOBEC3DQ96AK3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
APOBEC3DQ96AK3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.67■■□□□ 1.06
APOBEC3DQ96AK3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
APOBEC3DQ96AK3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
APOBEC3DQ96AK3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
APOBEC3DQ96AK3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
APOBEC3DQ96AK3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
APOBEC3DQ96AK3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOBEC3DQ96AK3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
APOBEC3DQ96AK3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOBEC3DQ96AK3 MIR3648-2-201ENST00000581792 180 ntBASIC21.66■■□□□ 1.06
APOBEC3DQ96AK3 MIR3648-1-201ENST00000615959 180 ntBASIC21.66■■□□□ 1.06
APOBEC3DQ96AK3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.66■■□□□ 1.06
APOBEC3DQ96AK3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOBEC3DQ96AK3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
APOBEC3DQ96AK3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
APOBEC3DQ96AK3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOBEC3DQ96AK3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
APOBEC3DQ96AK3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.65■■□□□ 1.06
APOBEC3DQ96AK3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
APOBEC3DQ96AK3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
APOBEC3DQ96AK3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
APOBEC3DQ96AK3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.65■■□□□ 1.06
APOBEC3DQ96AK3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
APOBEC3DQ96AK3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APOBEC3DQ96AK3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
APOBEC3DQ96AK3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
APOBEC3DQ96AK3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APOBEC3DQ96AK3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.63■■□□□ 1.05
APOBEC3DQ96AK3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.63■■□□□ 1.05
APOBEC3DQ96AK3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
APOBEC3DQ96AK3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
APOBEC3DQ96AK3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APOBEC3DQ96AK3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APOBEC3DQ96AK3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
APOBEC3DQ96AK3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.61■■□□□ 1.05
APOBEC3DQ96AK3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
APOBEC3DQ96AK3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms