Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPEB3Q8NE35 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.01■■□□□ 1.11
CPEB3Q8NE35 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.01■■□□□ 1.11
CPEB3Q8NE35 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPEB3Q8NE35 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPEB3Q8NE35 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPEB3Q8NE35 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPEB3Q8NE35 HES6-205ENST00000409356 528 ntTSL 2 BASIC22■■□□□ 1.11
CPEB3Q8NE35 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22■■□□□ 1.11
CPEB3Q8NE35 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22■■□□□ 1.11
CPEB3Q8NE35 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22■■□□□ 1.11
CPEB3Q8NE35 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPEB3Q8NE35 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPEB3Q8NE35 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CPEB3Q8NE35 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CPEB3Q8NE35 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPEB3Q8NE35 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPEB3Q8NE35 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.99■■□□□ 1.11
CPEB3Q8NE35 MIR3648-2-201ENST00000581792 180 ntBASIC21.99■■□□□ 1.11
CPEB3Q8NE35 MIR3648-1-201ENST00000615959 180 ntBASIC21.99■■□□□ 1.11
CPEB3Q8NE35 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CPEB3Q8NE35 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CPEB3Q8NE35 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.98■■□□□ 1.11
CPEB3Q8NE35 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPEB3Q8NE35 LINC01003-201ENST00000564834 1764 ntBASIC21.97■■□□□ 1.11
CPEB3Q8NE35 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.97■■□□□ 1.11
CPEB3Q8NE35 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPEB3Q8NE35 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPEB3Q8NE35 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.96■■□□□ 1.11
CPEB3Q8NE35 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPEB3Q8NE35 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPEB3Q8NE35 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CPEB3Q8NE35 BX255925.1-201ENST00000566954 1854 ntBASIC21.96■■□□□ 1.11
CPEB3Q8NE35 AC018358.1-201ENST00000631079 1402 ntBASIC21.96■■□□□ 1.11
CPEB3Q8NE35 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CPEB3Q8NE35 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPEB3Q8NE35 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPEB3Q8NE35 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPEB3Q8NE35 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPEB3Q8NE35 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPEB3Q8NE35 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.94■■□□□ 1.1
CPEB3Q8NE35 AC016575.1-201ENST00000607026 382 ntBASIC21.94■■□□□ 1.1
CPEB3Q8NE35 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPEB3Q8NE35 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CPEB3Q8NE35 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPEB3Q8NE35 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CPEB3Q8NE35 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CPEB3Q8NE35 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPEB3Q8NE35 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPEB3Q8NE35 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CPEB3Q8NE35 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.9■■□□□ 1.1
CPEB3Q8NE35 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPEB3Q8NE35 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPEB3Q8NE35 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CPEB3Q8NE35 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CPEB3Q8NE35 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPEB3Q8NE35 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPEB3Q8NE35 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.88■■□□□ 1.09
CPEB3Q8NE35 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPEB3Q8NE35 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPEB3Q8NE35 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPEB3Q8NE35 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPEB3Q8NE35 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPEB3Q8NE35 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.87■■□□□ 1.09
CPEB3Q8NE35 AC008813.1-201ENST00000536597 885 ntBASIC21.87■■□□□ 1.09
CPEB3Q8NE35 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPEB3Q8NE35 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPEB3Q8NE35 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.86■■□□□ 1.09
CPEB3Q8NE35 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPEB3Q8NE35 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPEB3Q8NE35 HLA-V-202ENST00000446817 847 ntBASIC21.85■■□□□ 1.09
CPEB3Q8NE35 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPEB3Q8NE35 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CPEB3Q8NE35 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPEB3Q8NE35 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPEB3Q8NE35 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CPEB3Q8NE35 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.84■■□□□ 1.09
CPEB3Q8NE35 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
CPEB3Q8NE35 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CPEB3Q8NE35 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPEB3Q8NE35 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.83■■□□□ 1.09
CPEB3Q8NE35 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CPEB3Q8NE35 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.82■■□□□ 1.08
CPEB3Q8NE35 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPEB3Q8NE35 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.82■■□□□ 1.08
CPEB3Q8NE35 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.82■■□□□ 1.08
CPEB3Q8NE35 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPEB3Q8NE35 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPEB3Q8NE35 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPEB3Q8NE35 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPEB3Q8NE35 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPEB3Q8NE35 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.81■■□□□ 1.08
CPEB3Q8NE35 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPEB3Q8NE35 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CPEB3Q8NE35 MIR639-201ENST00000384974 98 ntBASIC21.8■■□□□ 1.08
CPEB3Q8NE35 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.8■■□□□ 1.08
CPEB3Q8NE35 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CPEB3Q8NE35 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPEB3Q8NE35 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPEB3Q8NE35 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms