Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RCBTB1Q8NDN9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RCBTB1Q8NDN9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RCBTB1Q8NDN9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
RCBTB1Q8NDN9 AC100797.4-201ENST00000631653 1827 ntBASIC24.31■■□□□ 1.48
RCBTB1Q8NDN9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RCBTB1Q8NDN9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RCBTB1Q8NDN9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RCBTB1Q8NDN9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RCBTB1Q8NDN9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.29■■□□□ 1.48
RCBTB1Q8NDN9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RCBTB1Q8NDN9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
RCBTB1Q8NDN9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
RCBTB1Q8NDN9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RCBTB1Q8NDN9 AC012354.3-201ENST00000623734 483 ntBASIC24.28■■□□□ 1.48
RCBTB1Q8NDN9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
RCBTB1Q8NDN9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.27■■□□□ 1.48
RCBTB1Q8NDN9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RCBTB1Q8NDN9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.27■■□□□ 1.48
RCBTB1Q8NDN9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
RCBTB1Q8NDN9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.27■■□□□ 1.48
RCBTB1Q8NDN9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RCBTB1Q8NDN9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.26■■□□□ 1.47
RCBTB1Q8NDN9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.26■■□□□ 1.47
RCBTB1Q8NDN9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RCBTB1Q8NDN9 AP004833.2-201ENST00000532228 1454 ntBASIC24.26■■□□□ 1.47
RCBTB1Q8NDN9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RCBTB1Q8NDN9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
RCBTB1Q8NDN9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.25■■□□□ 1.47
RCBTB1Q8NDN9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.25■■□□□ 1.47
RCBTB1Q8NDN9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.25■■□□□ 1.47
RCBTB1Q8NDN9 AC092296.2-201ENST00000589470 999 ntBASIC24.25■■□□□ 1.47
RCBTB1Q8NDN9 U85056.1-201ENST00000616429 682 ntBASIC24.25■■□□□ 1.47
RCBTB1Q8NDN9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
RCBTB1Q8NDN9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
RCBTB1Q8NDN9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.24■■□□□ 1.47
RCBTB1Q8NDN9 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.24■■□□□ 1.47
RCBTB1Q8NDN9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RCBTB1Q8NDN9 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.24■■□□□ 1.47
RCBTB1Q8NDN9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RCBTB1Q8NDN9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RCBTB1Q8NDN9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RCBTB1Q8NDN9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RCBTB1Q8NDN9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RCBTB1Q8NDN9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RCBTB1Q8NDN9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RCBTB1Q8NDN9 ABCB10P3-201ENST00000561950 2166 ntBASIC24.22■■□□□ 1.47
RCBTB1Q8NDN9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
RCBTB1Q8NDN9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
RCBTB1Q8NDN9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.21■■□□□ 1.47
RCBTB1Q8NDN9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.21■■□□□ 1.47
RCBTB1Q8NDN9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.21■■□□□ 1.47
RCBTB1Q8NDN9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RCBTB1Q8NDN9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RCBTB1Q8NDN9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RCBTB1Q8NDN9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RCBTB1Q8NDN9 AC126177.7-201ENST00000547904 679 ntBASIC24.2■■□□□ 1.46
RCBTB1Q8NDN9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RCBTB1Q8NDN9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RCBTB1Q8NDN9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RCBTB1Q8NDN9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.18■■□□□ 1.46
RCBTB1Q8NDN9 AL033527.3-201ENST00000566366 1196 ntBASIC24.18■■□□□ 1.46
RCBTB1Q8NDN9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
RCBTB1Q8NDN9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.18■■□□□ 1.46
RCBTB1Q8NDN9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
RCBTB1Q8NDN9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.17■■□□□ 1.46
RCBTB1Q8NDN9 ECEL1P2-201ENST00000461596 1295 ntBASIC24.17■■□□□ 1.46
RCBTB1Q8NDN9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.17■■□□□ 1.46
RCBTB1Q8NDN9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RCBTB1Q8NDN9 AC018358.1-201ENST00000631079 1402 ntBASIC24.17■■□□□ 1.46
RCBTB1Q8NDN9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RCBTB1Q8NDN9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RCBTB1Q8NDN9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.16■■□□□ 1.46
RCBTB1Q8NDN9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RCBTB1Q8NDN9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RCBTB1Q8NDN9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RCBTB1Q8NDN9 AC139426.1-201ENST00000568218 2529 ntBASIC24.16■■□□□ 1.46
RCBTB1Q8NDN9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RCBTB1Q8NDN9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RCBTB1Q8NDN9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RCBTB1Q8NDN9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RCBTB1Q8NDN9 AL139393.2-201ENST00000608721 2025 ntBASIC24.14■■□□□ 1.45
RCBTB1Q8NDN9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RCBTB1Q8NDN9 AL157400.5-201ENST00000507624 621 ntBASIC24.13■■□□□ 1.45
RCBTB1Q8NDN9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RCBTB1Q8NDN9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.12■■□□□ 1.45
RCBTB1Q8NDN9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RCBTB1Q8NDN9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.12■■□□□ 1.45
RCBTB1Q8NDN9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
RCBTB1Q8NDN9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
RCBTB1Q8NDN9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RCBTB1Q8NDN9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RCBTB1Q8NDN9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.11■■□□□ 1.45
RCBTB1Q8NDN9 KRT18P60-201ENST00000312876 1297 ntBASIC24.11■■□□□ 1.45
RCBTB1Q8NDN9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.11■■□□□ 1.45
RCBTB1Q8NDN9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.11■■□□□ 1.45
RCBTB1Q8NDN9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RCBTB1Q8NDN9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RCBTB1Q8NDN9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RCBTB1Q8NDN9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms