Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.08■■□□□ 1.61
FBXO39Q8N4B4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
FBXO39Q8N4B4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.6
FBXO39Q8N4B4 AC100797.4-201ENST00000631653 1827 ntBASIC25.07■■□□□ 1.6
FBXO39Q8N4B4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
FBXO39Q8N4B4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
FBXO39Q8N4B4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
FBXO39Q8N4B4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
FBXO39Q8N4B4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
FBXO39Q8N4B4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.05■■□□□ 1.6
FBXO39Q8N4B4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
FBXO39Q8N4B4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
FBXO39Q8N4B4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.04■■□□□ 1.6
FBXO39Q8N4B4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.04■■□□□ 1.6
FBXO39Q8N4B4 BX255925.1-201ENST00000566954 1854 ntBASIC25.03■■□□□ 1.6
FBXO39Q8N4B4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.03■■□□□ 1.6
FBXO39Q8N4B4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
FBXO39Q8N4B4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
FBXO39Q8N4B4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
FBXO39Q8N4B4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
FBXO39Q8N4B4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
FBXO39Q8N4B4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.02■■□□□ 1.6
FBXO39Q8N4B4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
FBXO39Q8N4B4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
FBXO39Q8N4B4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
FBXO39Q8N4B4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
FBXO39Q8N4B4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
FBXO39Q8N4B4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
FBXO39Q8N4B4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.01■■□□□ 1.59
FBXO39Q8N4B4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.01■■□□□ 1.59
FBXO39Q8N4B4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
FBXO39Q8N4B4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
FBXO39Q8N4B4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
FBXO39Q8N4B4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
FBXO39Q8N4B4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25■■□□□ 1.59
FBXO39Q8N4B4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25■■□□□ 1.59
FBXO39Q8N4B4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25■■□□□ 1.59
FBXO39Q8N4B4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25■■□□□ 1.59
FBXO39Q8N4B4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
FBXO39Q8N4B4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
FBXO39Q8N4B4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
FBXO39Q8N4B4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
FBXO39Q8N4B4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
FBXO39Q8N4B4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.99■■□□□ 1.59
FBXO39Q8N4B4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
FBXO39Q8N4B4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
FBXO39Q8N4B4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
FBXO39Q8N4B4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
FBXO39Q8N4B4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.98■■□□□ 1.59
FBXO39Q8N4B4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
FBXO39Q8N4B4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
FBXO39Q8N4B4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.97■■□□□ 1.59
FBXO39Q8N4B4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.97■■□□□ 1.59
FBXO39Q8N4B4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
FBXO39Q8N4B4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
FBXO39Q8N4B4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
FBXO39Q8N4B4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
FBXO39Q8N4B4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
FBXO39Q8N4B4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.96■■□□□ 1.59
FBXO39Q8N4B4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.96■■□□□ 1.59
FBXO39Q8N4B4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
FBXO39Q8N4B4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.96■■□□□ 1.59
FBXO39Q8N4B4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.96■■□□□ 1.59
FBXO39Q8N4B4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.96■■□□□ 1.59
FBXO39Q8N4B4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
FBXO39Q8N4B4 AL121749.1-202ENST00000609313 2153 ntBASIC24.95■■□□□ 1.58
FBXO39Q8N4B4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
FBXO39Q8N4B4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
FBXO39Q8N4B4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.95■■□□□ 1.58
FBXO39Q8N4B4 AC135983.2-203ENST00000454486 1613 ntBASIC24.94■■□□□ 1.58
FBXO39Q8N4B4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.94■■□□□ 1.58
FBXO39Q8N4B4 LINC01003-201ENST00000564834 1764 ntBASIC24.94■■□□□ 1.58
FBXO39Q8N4B4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
FBXO39Q8N4B4 LINC00273-201ENST00000539813 1452 ntBASIC24.94■■□□□ 1.58
FBXO39Q8N4B4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.93■■□□□ 1.58
FBXO39Q8N4B4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.93■■□□□ 1.58
FBXO39Q8N4B4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
FBXO39Q8N4B4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.93■■□□□ 1.58
FBXO39Q8N4B4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.93■■□□□ 1.58
FBXO39Q8N4B4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.93■■□□□ 1.58
FBXO39Q8N4B4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
FBXO39Q8N4B4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
FBXO39Q8N4B4 AP002414.2-202ENST00000590929 1450 ntBASIC24.92■■□□□ 1.58
FBXO39Q8N4B4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
FBXO39Q8N4B4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
FBXO39Q8N4B4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
FBXO39Q8N4B4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
FBXO39Q8N4B4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.91■■□□□ 1.58
FBXO39Q8N4B4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
FBXO39Q8N4B4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.91■■□□□ 1.58
FBXO39Q8N4B4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
FBXO39Q8N4B4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.9■■□□□ 1.58
FBXO39Q8N4B4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.89■■□□□ 1.58
FBXO39Q8N4B4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
FBXO39Q8N4B4 RARRES2P2-201ENST00000394842 485 ntBASIC24.89■■□□□ 1.58
FBXO39Q8N4B4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.89■■□□□ 1.58
FBXO39Q8N4B4 WHAMMP2-203ENST00000563942 1603 ntBASIC24.89■■□□□ 1.57
FBXO39Q8N4B4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
FBXO39Q8N4B4 GPX1-201ENST00000419349 1106 ntBASIC24.88■■□□□ 1.57
FBXO39Q8N4B4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms