Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
TRBV12-3P01733 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV12-3P01733 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV12-3P01733 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV12-3P01733 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV12-3P01733 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV12-3P01733 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRBV12-3P01733 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV12-3P01733 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV12-3P01733 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV12-3P01733 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRBV12-3P01733 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRBV12-3P01733 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV12-3P01733 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRBV12-3P01733 HLA-V-202ENST00000446817 847 ntBASIC19.49■□□□□ 0.71
TRBV12-3P01733 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV12-3P01733 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.48■□□□□ 0.71
TRBV12-3P01733 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV12-3P01733 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV12-3P01733 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV12-3P01733 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRBV12-3P01733 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRBV12-3P01733 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV12-3P01733 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV12-3P01733 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV12-3P01733 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV12-3P01733 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV12-3P01733 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV12-3P01733 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV12-3P01733 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRBV12-3P01733 MIR639-201ENST00000384974 98 ntBASIC19.45■□□□□ 0.7
TRBV12-3P01733 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV12-3P01733 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV12-3P01733 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV12-3P01733 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV12-3P01733 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
TRBV12-3P01733 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV12-3P01733 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV12-3P01733 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRBV12-3P01733 AC018358.1-201ENST00000631079 1402 ntBASIC19.43■□□□□ 0.7
TRBV12-3P01733 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRBV12-3P01733 LINC01003-201ENST00000564834 1764 ntBASIC19.43■□□□□ 0.7
TRBV12-3P01733 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV12-3P01733 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV12-3P01733 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV12-3P01733 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRBV12-3P01733 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.42■□□□□ 0.7
TRBV12-3P01733 AC008813.1-201ENST00000536597 885 ntBASIC19.42■□□□□ 0.7
TRBV12-3P01733 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV12-3P01733 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV12-3P01733 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV12-3P01733 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV12-3P01733 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.41■□□□□ 0.7
TRBV12-3P01733 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRBV12-3P01733 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRBV12-3P01733 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV12-3P01733 BX255925.1-201ENST00000566954 1854 ntBASIC19.39■□□□□ 0.7
TRBV12-3P01733 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRBV12-3P01733 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TRBV12-3P01733 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV12-3P01733 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV12-3P01733 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV12-3P01733 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV12-3P01733 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV12-3P01733 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRBV12-3P01733 MIR219A2-201ENST00000608502 1504 ntBASIC19.37■□□□□ 0.69
TRBV12-3P01733 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRBV12-3P01733 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV12-3P01733 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV12-3P01733 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV12-3P01733 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV12-3P01733 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.36■□□□□ 0.69
TRBV12-3P01733 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV12-3P01733 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.35■□□□□ 0.69
TRBV12-3P01733 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRBV12-3P01733 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV12-3P01733 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TRBV12-3P01733 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV12-3P01733 AC148477.6-201ENST00000623746 465 ntBASIC19.35■□□□□ 0.69
TRBV12-3P01733 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV12-3P01733 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV12-3P01733 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV12-3P01733 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV12-3P01733 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV12-3P01733 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV12-3P01733 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV12-3P01733 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV12-3P01733 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV12-3P01733 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV12-3P01733 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV12-3P01733 MIR4449-201ENST00000578365 66 ntBASIC19.33■□□□□ 0.68
TRBV12-3P01733 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
TRBV12-3P01733 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRBV12-3P01733 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV12-3P01733 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV12-3P01733 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
TRBV12-3P01733 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRBV12-3P01733 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV12-3P01733 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV12-3P01733 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms