Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.64
HFM1A2PYH4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC37.82■■■■□ 3.64
HFM1A2PYH4 AC139426.1-201ENST00000568218 2529 ntBASIC37.82■■■■□ 3.64
HFM1A2PYH4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
HFM1A2PYH4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC37.81■■■■□ 3.64
HFM1A2PYH4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
HFM1A2PYH4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
HFM1A2PYH4 ABHD17AP3-201ENST00000503096 1137 ntBASIC37.81■■■■□ 3.64
HFM1A2PYH4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC37.81■■■■□ 3.64
HFM1A2PYH4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
HFM1A2PYH4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
HFM1A2PYH4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC37.79■■■■□ 3.64
HFM1A2PYH4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC37.79■■■■□ 3.64
HFM1A2PYH4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
HFM1A2PYH4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC37.79■■■■□ 3.64
HFM1A2PYH4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
HFM1A2PYH4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
HFM1A2PYH4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC37.78■■■■□ 3.64
HFM1A2PYH4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC37.78■■■■□ 3.64
HFM1A2PYH4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
HFM1A2PYH4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
HFM1A2PYH4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
HFM1A2PYH4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC37.78■■■■□ 3.64
HFM1A2PYH4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC37.77■■■■□ 3.64
HFM1A2PYH4 AC018358.1-201ENST00000631079 1402 ntBASIC37.77■■■■□ 3.64
HFM1A2PYH4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
HFM1A2PYH4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC37.76■■■■□ 3.63
HFM1A2PYH4 DRD5P2-201ENST00000421395 2012 ntBASIC37.76■■■■□ 3.63
HFM1A2PYH4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
HFM1A2PYH4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
HFM1A2PYH4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC37.75■■■■□ 3.63
HFM1A2PYH4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
HFM1A2PYH4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
HFM1A2PYH4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC37.74■■■■□ 3.63
HFM1A2PYH4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC37.74■■■■□ 3.63
HFM1A2PYH4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC37.74■■■■□ 3.63
HFM1A2PYH4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC37.74■■■■□ 3.63
HFM1A2PYH4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
HFM1A2PYH4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC37.73■■■■□ 3.63
HFM1A2PYH4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC37.73■■■■□ 3.63
HFM1A2PYH4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
HFM1A2PYH4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
HFM1A2PYH4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC37.72■■■■□ 3.63
HFM1A2PYH4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC37.72■■■■□ 3.63
HFM1A2PYH4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
HFM1A2PYH4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
HFM1A2PYH4 MED25-210ENST00000612854 801 ntTSL 5 BASIC37.71■■■■□ 3.63
HFM1A2PYH4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
HFM1A2PYH4 MED25-214ENST00000622402 642 ntTSL 5 BASIC37.71■■■■□ 3.63
HFM1A2PYH4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
HFM1A2PYH4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
HFM1A2PYH4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
HFM1A2PYH4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC37.7■■■■□ 3.63
HFM1A2PYH4 AC060814.1-201ENST00000554326 538 ntBASIC37.69■■■■□ 3.62
HFM1A2PYH4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC37.69■■■■□ 3.62
HFM1A2PYH4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC37.69■■■■□ 3.62
HFM1A2PYH4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC37.68■■■■□ 3.62
HFM1A2PYH4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC37.68■■■■□ 3.62
HFM1A2PYH4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC37.68■■■■□ 3.62
HFM1A2PYH4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC37.67■■■■□ 3.62
HFM1A2PYH4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC37.67■■■■□ 3.62
HFM1A2PYH4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
HFM1A2PYH4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC37.66■■■■□ 3.62
HFM1A2PYH4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC37.66■■■■□ 3.62
HFM1A2PYH4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC37.66■■■■□ 3.62
HFM1A2PYH4 GPX1-201ENST00000419349 1106 ntBASIC37.66■■■■□ 3.62
HFM1A2PYH4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
HFM1A2PYH4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC37.66■■■■□ 3.62
HFM1A2PYH4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
HFM1A2PYH4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC37.65■■■■□ 3.62
HFM1A2PYH4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
HFM1A2PYH4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC37.64■■■■□ 3.62
HFM1A2PYH4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC37.62■■■■□ 3.61
HFM1A2PYH4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC37.62■■■■□ 3.61
HFM1A2PYH4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC37.61■■■■□ 3.61
HFM1A2PYH4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC37.61■■■■□ 3.61
HFM1A2PYH4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC37.6■■■■□ 3.61
HFM1A2PYH4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
HFM1A2PYH4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
HFM1A2PYH4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC37.6■■■■□ 3.61
HFM1A2PYH4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
HFM1A2PYH4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC37.58■■■■□ 3.61
HFM1A2PYH4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC37.58■■■■□ 3.61
HFM1A2PYH4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC37.58■■■■□ 3.61
HFM1A2PYH4 AL157400.5-201ENST00000507624 621 ntBASIC37.56■■■■□ 3.6
HFM1A2PYH4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC37.56■■■■□ 3.6
HFM1A2PYH4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC37.56■■■■□ 3.6
HFM1A2PYH4 AC092296.2-201ENST00000589470 999 ntBASIC37.56■■■■□ 3.6
HFM1A2PYH4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC37.56■■■■□ 3.6
HFM1A2PYH4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
HFM1A2PYH4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC37.55■■■■□ 3.6
HFM1A2PYH4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC37.54■■■■□ 3.6
HFM1A2PYH4 RARRES2P2-201ENST00000394842 485 ntBASIC37.54■■■■□ 3.6
HFM1A2PYH4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
HFM1A2PYH4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC37.54■■■■□ 3.6
HFM1A2PYH4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
HFM1A2PYH4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC37.53■■■■□ 3.6
HFM1A2PYH4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC37.53■■■■□ 3.6
HFM1A2PYH4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC37.53■■■■□ 3.6
HFM1A2PYH4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms