Protein–RNA interactions for Protein: A0A0C4DH29

IGHV1-3, Immunoglobulin heavy variable 1-3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-3A0A0C4DH29 LINC01003-201ENST00000564834 1764 ntBASIC20.39■□□□□ 0.86
IGHV1-3A0A0C4DH29 AC018358.1-201ENST00000631079 1402 ntBASIC20.39■□□□□ 0.85
IGHV1-3A0A0C4DH29 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IGHV1-3A0A0C4DH29 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IGHV1-3A0A0C4DH29 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGHV1-3A0A0C4DH29 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IGHV1-3A0A0C4DH29 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGHV1-3A0A0C4DH29 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IGHV1-3A0A0C4DH29 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGHV1-3A0A0C4DH29 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
IGHV1-3A0A0C4DH29 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGHV1-3A0A0C4DH29 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGHV1-3A0A0C4DH29 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.37■□□□□ 0.85
IGHV1-3A0A0C4DH29 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
IGHV1-3A0A0C4DH29 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IGHV1-3A0A0C4DH29 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
IGHV1-3A0A0C4DH29 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGHV1-3A0A0C4DH29 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.36■□□□□ 0.85
IGHV1-3A0A0C4DH29 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.36■□□□□ 0.85
IGHV1-3A0A0C4DH29 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IGHV1-3A0A0C4DH29 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
IGHV1-3A0A0C4DH29 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
IGHV1-3A0A0C4DH29 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.35■□□□□ 0.85
IGHV1-3A0A0C4DH29 CR559946.2-201ENST00000623684 991 ntBASIC20.35■□□□□ 0.85
IGHV1-3A0A0C4DH29 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGHV1-3A0A0C4DH29 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGHV1-3A0A0C4DH29 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IGHV1-3A0A0C4DH29 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGHV1-3A0A0C4DH29 MIR3648-2-201ENST00000581792 180 ntBASIC20.34■□□□□ 0.85
IGHV1-3A0A0C4DH29 MIR3648-1-201ENST00000615959 180 ntBASIC20.34■□□□□ 0.85
IGHV1-3A0A0C4DH29 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.34■□□□□ 0.85
IGHV1-3A0A0C4DH29 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IGHV1-3A0A0C4DH29 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IGHV1-3A0A0C4DH29 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
IGHV1-3A0A0C4DH29 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
IGHV1-3A0A0C4DH29 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IGHV1-3A0A0C4DH29 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
IGHV1-3A0A0C4DH29 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
IGHV1-3A0A0C4DH29 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
IGHV1-3A0A0C4DH29 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.31■□□□□ 0.84
IGHV1-3A0A0C4DH29 AC008813.1-201ENST00000536597 885 ntBASIC20.31■□□□□ 0.84
IGHV1-3A0A0C4DH29 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
IGHV1-3A0A0C4DH29 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
IGHV1-3A0A0C4DH29 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
IGHV1-3A0A0C4DH29 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
IGHV1-3A0A0C4DH29 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IGHV1-3A0A0C4DH29 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
IGHV1-3A0A0C4DH29 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
IGHV1-3A0A0C4DH29 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IGHV1-3A0A0C4DH29 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
IGHV1-3A0A0C4DH29 AC016575.1-201ENST00000607026 382 ntBASIC20.29■□□□□ 0.84
IGHV1-3A0A0C4DH29 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.29■□□□□ 0.84
IGHV1-3A0A0C4DH29 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IGHV1-3A0A0C4DH29 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGHV1-3A0A0C4DH29 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGHV1-3A0A0C4DH29 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGHV1-3A0A0C4DH29 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGHV1-3A0A0C4DH29 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IGHV1-3A0A0C4DH29 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGHV1-3A0A0C4DH29 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGHV1-3A0A0C4DH29 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IGHV1-3A0A0C4DH29 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
IGHV1-3A0A0C4DH29 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGHV1-3A0A0C4DH29 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.26■□□□□ 0.83
IGHV1-3A0A0C4DH29 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.26■□□□□ 0.83
IGHV1-3A0A0C4DH29 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGHV1-3A0A0C4DH29 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGHV1-3A0A0C4DH29 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IGHV1-3A0A0C4DH29 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IGHV1-3A0A0C4DH29 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IGHV1-3A0A0C4DH29 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.23■□□□□ 0.83
IGHV1-3A0A0C4DH29 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
IGHV1-3A0A0C4DH29 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
IGHV1-3A0A0C4DH29 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.22■□□□□ 0.83
IGHV1-3A0A0C4DH29 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IGHV1-3A0A0C4DH29 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.22■□□□□ 0.83
IGHV1-3A0A0C4DH29 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IGHV1-3A0A0C4DH29 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IGHV1-3A0A0C4DH29 HLA-V-202ENST00000446817 847 ntBASIC20.22■□□□□ 0.83
IGHV1-3A0A0C4DH29 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.22■□□□□ 0.83
IGHV1-3A0A0C4DH29 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
IGHV1-3A0A0C4DH29 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
IGHV1-3A0A0C4DH29 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.21■□□□□ 0.83
IGHV1-3A0A0C4DH29 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IGHV1-3A0A0C4DH29 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IGHV1-3A0A0C4DH29 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
IGHV1-3A0A0C4DH29 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.2■□□□□ 0.82
IGHV1-3A0A0C4DH29 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
IGHV1-3A0A0C4DH29 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.2■□□□□ 0.82
IGHV1-3A0A0C4DH29 AC148477.6-201ENST00000623746 465 ntBASIC20.2■□□□□ 0.82
IGHV1-3A0A0C4DH29 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
IGHV1-3A0A0C4DH29 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
IGHV1-3A0A0C4DH29 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IGHV1-3A0A0C4DH29 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IGHV1-3A0A0C4DH29 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IGHV1-3A0A0C4DH29 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.19■□□□□ 0.82
IGHV1-3A0A0C4DH29 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
IGHV1-3A0A0C4DH29 MIR219A2-201ENST00000608502 1504 ntBASIC20.18■□□□□ 0.82
IGHV1-3A0A0C4DH29 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.18■□□□□ 0.82
IGHV1-3A0A0C4DH29 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms