Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 AC100797.4-201ENST00000631653 1827 ntBASIC17.79■□□□□ 0.44
TRAV10A0A0B4J240 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV10A0A0B4J240 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV10A0A0B4J240 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV10A0A0B4J240 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV10A0A0B4J240 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRAV10A0A0B4J240 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV10A0A0B4J240 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV10A0A0B4J240 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV10A0A0B4J240 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV10A0A0B4J240 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV10A0A0B4J240 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV10A0A0B4J240 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV10A0A0B4J240 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV10A0A0B4J240 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV10A0A0B4J240 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV10A0A0B4J240 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV10A0A0B4J240 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV10A0A0B4J240 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV10A0A0B4J240 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV10A0A0B4J240 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV10A0A0B4J240 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
TRAV10A0A0B4J240 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRAV10A0A0B4J240 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV10A0A0B4J240 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRAV10A0A0B4J240 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV10A0A0B4J240 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV10A0A0B4J240 AL139393.2-201ENST00000608721 2025 ntBASIC17.73■□□□□ 0.43
TRAV10A0A0B4J240 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV10A0A0B4J240 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV10A0A0B4J240 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV10A0A0B4J240 NTF6A-201ENST00000591175 560 ntBASIC17.72■□□□□ 0.43
TRAV10A0A0B4J240 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV10A0A0B4J240 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV10A0A0B4J240 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV10A0A0B4J240 ECEL1P2-201ENST00000461596 1295 ntBASIC17.71■□□□□ 0.43
TRAV10A0A0B4J240 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV10A0A0B4J240 AC092296.2-201ENST00000589470 999 ntBASIC17.71■□□□□ 0.43
TRAV10A0A0B4J240 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV10A0A0B4J240 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV10A0A0B4J240 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.71■□□□□ 0.42
TRAV10A0A0B4J240 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRAV10A0A0B4J240 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAV10A0A0B4J240 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV10A0A0B4J240 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV10A0A0B4J240 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV10A0A0B4J240 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRAV10A0A0B4J240 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV10A0A0B4J240 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV10A0A0B4J240 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV10A0A0B4J240 ABCB10P3-201ENST00000561950 2166 ntBASIC17.68■□□□□ 0.42
TRAV10A0A0B4J240 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV10A0A0B4J240 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRAV10A0A0B4J240 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV10A0A0B4J240 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV10A0A0B4J240 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV10A0A0B4J240 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRAV10A0A0B4J240 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV10A0A0B4J240 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV10A0A0B4J240 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV10A0A0B4J240 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV10A0A0B4J240 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV10A0A0B4J240 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV10A0A0B4J240 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV10A0A0B4J240 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAV10A0A0B4J240 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRAV10A0A0B4J240 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV10A0A0B4J240 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV10A0A0B4J240 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV10A0A0B4J240 AP002414.2-202ENST00000590929 1450 ntBASIC17.66■□□□□ 0.42
TRAV10A0A0B4J240 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV10A0A0B4J240 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV10A0A0B4J240 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
TRAV10A0A0B4J240 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV10A0A0B4J240 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRAV10A0A0B4J240 AC012354.3-201ENST00000623734 483 ntBASIC17.65■□□□□ 0.42
TRAV10A0A0B4J240 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV10A0A0B4J240 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRAV10A0A0B4J240 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV10A0A0B4J240 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV10A0A0B4J240 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV10A0A0B4J240 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAV10A0A0B4J240 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAV10A0A0B4J240 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRAV10A0A0B4J240 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRAV10A0A0B4J240 AL359258.2-201ENST00000564063 1566 ntBASIC17.64■□□□□ 0.41
TRAV10A0A0B4J240 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV10A0A0B4J240 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV10A0A0B4J240 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV10A0A0B4J240 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV10A0A0B4J240 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV10A0A0B4J240 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRAV10A0A0B4J240 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV10A0A0B4J240 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV10A0A0B4J240 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV10A0A0B4J240 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV10A0A0B4J240 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV10A0A0B4J240 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRAV10A0A0B4J240 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV10A0A0B4J240 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms