Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRAV19A0A0A6YYK7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRAV19A0A0A6YYK7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRAV19A0A0A6YYK7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRAV19A0A0A6YYK7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 AC092296.2-201ENST00000589470 999 ntBASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 ABCB10P3-201ENST00000561950 2166 ntBASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.24■■□□□ 1.79
TRAV19A0A0A6YYK7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRAV19A0A0A6YYK7 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.23■■□□□ 1.79
TRAV19A0A0A6YYK7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TRAV19A0A0A6YYK7 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.23■■□□□ 1.79
TRAV19A0A0A6YYK7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.23■■□□□ 1.79
TRAV19A0A0A6YYK7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRAV19A0A0A6YYK7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.22■■□□□ 1.79
TRAV19A0A0A6YYK7 NTF6A-201ENST00000591175 560 ntBASIC26.22■■□□□ 1.79
TRAV19A0A0A6YYK7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRAV19A0A0A6YYK7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
TRAV19A0A0A6YYK7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
TRAV19A0A0A6YYK7 ABCB10P1-201ENST00000614297 2181 ntBASIC26.2■■□□□ 1.79
TRAV19A0A0A6YYK7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.2■■□□□ 1.78
TRAV19A0A0A6YYK7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRAV19A0A0A6YYK7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRAV19A0A0A6YYK7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.2■■□□□ 1.78
TRAV19A0A0A6YYK7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.2■■□□□ 1.78
TRAV19A0A0A6YYK7 ECEL1P2-201ENST00000461596 1295 ntBASIC26.19■■□□□ 1.78
TRAV19A0A0A6YYK7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRAV19A0A0A6YYK7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
TRAV19A0A0A6YYK7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRAV19A0A0A6YYK7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRAV19A0A0A6YYK7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.18■■□□□ 1.78
TRAV19A0A0A6YYK7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.17■■□□□ 1.78
TRAV19A0A0A6YYK7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.16■■□□□ 1.78
TRAV19A0A0A6YYK7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRAV19A0A0A6YYK7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.16■■□□□ 1.78
TRAV19A0A0A6YYK7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.16■■□□□ 1.78
TRAV19A0A0A6YYK7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRAV19A0A0A6YYK7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.15■■□□□ 1.78
TRAV19A0A0A6YYK7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TRAV19A0A0A6YYK7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 AP002414.2-202ENST00000590929 1450 ntBASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRAV19A0A0A6YYK7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TRAV19A0A0A6YYK7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.13■■□□□ 1.77
TRAV19A0A0A6YYK7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRAV19A0A0A6YYK7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRAV19A0A0A6YYK7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.13■■□□□ 1.77
TRAV19A0A0A6YYK7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.13■■□□□ 1.77
TRAV19A0A0A6YYK7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRAV19A0A0A6YYK7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRAV19A0A0A6YYK7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRAV19A0A0A6YYK7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.11■■□□□ 1.77
TRAV19A0A0A6YYK7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.11■■□□□ 1.77
TRAV19A0A0A6YYK7 AL157400.5-201ENST00000507624 621 ntBASIC26.11■■□□□ 1.77
TRAV19A0A0A6YYK7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRAV19A0A0A6YYK7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRAV19A0A0A6YYK7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.1■■□□□ 1.77
TRAV19A0A0A6YYK7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.1■■□□□ 1.77
TRAV19A0A0A6YYK7 AC012354.3-201ENST00000623734 483 ntBASIC26.1■■□□□ 1.77
TRAV19A0A0A6YYK7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TRAV19A0A0A6YYK7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRAV19A0A0A6YYK7 AL359258.2-201ENST00000564063 1566 ntBASIC26.09■■□□□ 1.77
TRAV19A0A0A6YYK7 U85056.1-201ENST00000616429 682 ntBASIC26.09■■□□□ 1.77
TRAV19A0A0A6YYK7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.09■■□□□ 1.77
TRAV19A0A0A6YYK7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.09■■□□□ 1.77
TRAV19A0A0A6YYK7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
TRAV19A0A0A6YYK7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
TRAV19A0A0A6YYK7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.07■■□□□ 1.76
TRAV19A0A0A6YYK7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TRAV19A0A0A6YYK7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TRAV19A0A0A6YYK7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TRAV19A0A0A6YYK7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRAV19A0A0A6YYK7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
TRAV19A0A0A6YYK7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
TRAV19A0A0A6YYK7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRAV19A0A0A6YYK7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.04■■□□□ 1.76
TRAV19A0A0A6YYK7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRAV19A0A0A6YYK7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TRAV19A0A0A6YYK7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
TRAV19A0A0A6YYK7 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.04■■□□□ 1.76
TRAV19A0A0A6YYK7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRAV19A0A0A6YYK7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
TRAV19A0A0A6YYK7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TRAV19A0A0A6YYK7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 239.6 ms