RNA–Protein interactions for RNA: ENST00000622789.4

ARFRP1-214, Transcript of ADP ribosylation factor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFRP1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFRP1-214ENST00000622789 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.08■□□□□ 0.976e-7■■■■■ 139.2
ARFRP1-214ENST00000622789 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.47■■□□□ 1.198e-7■■■■■ 94.9
ARFRP1-214ENST00000622789 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.15■■□□□ 1.141e-11■■■■■ 94.4
ARFRP1-214ENST00000622789 SF3B1O75533 1304 aaKnown RBP eCLIP21.03■□□□□ 0.961e-10■■■■■ 74.7
ARFRP1-214ENST00000622789 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.73■■□□□ 1.235e-9■■■■■ 55.6
ARFRP1-214ENST00000622789 AARSP49588 968 aaKnown RBP eCLIP22.59■■□□□ 1.217e-9■■■■■ 43.7
ARFRP1-214ENST00000622789 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.73■□□□□ 0.754e-7■■■■■ 43.2
ARFRP1-214ENST00000622789 ZRANB2O95218 330 aaKnown RBP eCLIP23.15■■□□□ 1.35e-9■■■■■ 40.7
ARFRP1-214ENST00000622789 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.6■■□□□ 1.212e-18■■■■■ 37.4
ARFRP1-214ENST00000622789 SF3B4Q15427 424 aaKnown RBP eCLIP19.18■□□□□ 0.664e-9■■■■■ 36.9
ARFRP1-214ENST00000622789 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.16■□□□□ 0.983e-6■■■■■ 33.6
ARFRP1-214ENST00000622789 PCBP1Q15365 356 aaKnown RBP eCLIP21.05■□□□□ 0.968e-6■■■■■ 32.8
ARFRP1-214ENST00000622789 PTBP1P26599 531 aaKnown RBP eCLIP18.84■□□□□ 0.618e-7■■■■■ 32.7
ARFRP1-214ENST00000622789 LSM11P83369 360 aaKnown RBP eCLIP19.58■□□□□ 0.724e-8■■■■■ 30.2
ARFRP1-214ENST00000622789 EFTUD2Q15029 972 aaKnown RBP eCLIP21.69■■□□□ 1.062e-7■■■■■ 30.2
ARFRP1-214ENST00000622789 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.79■■□□□ 1.083e-6■■■■■ 28.9
ARFRP1-214ENST00000622789 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.71■■■□□ 2.352e-6■■■■■ 28.6
ARFRP1-214ENST00000622789 UPF1Q92900 1129 aaKnown RBP eCLIP20.98■□□□□ 0.953e-12■■■■■ 28
ARFRP1-214ENST00000622789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.26■■■□□ 2.116e-7■■■■■ 27.8
ARFRP1-214ENST00000622789 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.7■□□□□ 0.588e-10■■■■□ 25.9
ARFRP1-214ENST00000622789 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.69■■□□□ 1.228e-7■■■■□ 25.8
ARFRP1-214ENST00000622789 AATFQ9NY61 560 aaKnown RBP eCLIP23.64■■□□□ 1.371e-6■■■■□ 24.7
ARFRP1-214ENST00000622789 ZC3H11AO75152 810 aaKnown RBP eCLIP21.92■■□□□ 1.11e-7■■■■□ 24.3
ARFRP1-214ENST00000622789 DDX6P26196 483 aaKnown RBP eCLIP19.7■□□□□ 0.741e-6■■■■□ 24.2
ARFRP1-214ENST00000622789 NONOQ15233 471 aaKnown RBP eCLIP23.14■■□□□ 1.295e-7■■■■□ 23.1
ARFRP1-214ENST00000622789 EWSR1Q01844 656 aaKnown RBP eCLIP17.57■□□□□ 0.46e-8■■■■□ 22.6
ARFRP1-214ENST00000622789 PABPC4Q13310 644 aaKnown RBP eCLIP22.78■■□□□ 1.246e-8■■■■□ 22.5
ARFRP1-214ENST00000622789 RBFOX2O43251 390 aaKnown RBP eCLIP16.89■□□□□ 0.294e-7■■■■□ 22.3
ARFRP1-214ENST00000622789 AKAP1Q92667 903 aaKnown RBP eCLIP18.77■□□□□ 0.65e-8■■■■□ 20.4
ARFRP1-214ENST00000622789 GTF2F1P35269 517 aaKnown RBP eCLIP23.86■■□□□ 1.411e-7■■■■□ 19.5
ARFRP1-214ENST00000622789 FUSP35637 526 aaKnown RBP eCLIP12.98□□□□□ -0.331e-6■■■■□ 19.3
ARFRP1-214ENST00000622789 SRSF1Q07955 248 aaKnown RBP eCLIP15.44■□□□□ 0.062e-10■■■■□ 19.3
ARFRP1-214ENST00000622789 PCBP2Q15366 365 aaKnown RBP eCLIP20.25■□□□□ 0.838e-8■■■□□ 18.7
ARFRP1-214ENST00000622789 SF3A3Q12874 501 aaKnown RBP eCLIP22.08■■□□□ 1.121e-6■■■□□ 18.5
ARFRP1-214ENST00000622789 AQRO60306 1485 aaKnown RBP eCLIP29.93■■■□□ 2.387e-7■■■□□ 18.4
ARFRP1-214ENST00000622789 PRPF4O43172 522 aaKnown RBP eCLIP21.54■■□□□ 1.041e-7■■■□□ 18.2
ARFRP1-214ENST00000622789 SMNDC1O75940 238 aaKnown RBP eCLIP21.01■□□□□ 0.957e-7■■■□□ 17.9
ARFRP1-214ENST00000622789 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.31■□□□□ 0.846e-6■■■□□ 17.8
ARFRP1-214ENST00000622789 FKBP4Q02790 459 aaKnown RBP eCLIP24.4■■□□□ 1.53e-6■■■□□ 17.7
ARFRP1-214ENST00000622789 NCBP2P52298 156 aaKnown RBP eCLIP19.46■□□□□ 0.715e-7■■■□□ 17.2
ARFRP1-214ENST00000622789 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.74■■□□□ 1.075e-8■■■□□ 16.7
ARFRP1-214ENST00000622789 PABPN1Q86U42 306 aaKnown RBP eCLIP32.97■■■□□ 2.876e-7■■■□□ 16.5
ARFRP1-214ENST00000622789 FTOQ9C0B1 505 aaKnown RBP eCLIP24.38■■□□□ 1.491e-6■■■□□ 16.3
ARFRP1-214ENST00000622789 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.26■□□□□ 0.991e-6■■■□□ 16.1
ARFRP1-214ENST00000622789 RBM5P52756 815 aaKnown RBP eCLIP22.86■■□□□ 1.251e-6■■■□□ 14.9
ARFRP1-214ENST00000622789 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.55■■□□□ 1.365e-6■■■□□ 14.6
ARFRP1-214ENST00000622789 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.46■□□□□ 0.872e-7■■□□□ 14.4
ARFRP1-214ENST00000622789 LARP4Q71RC2 724 aaKnown RBP eCLIP20.59■□□□□ 0.898e-10■■□□□ 14.3
ARFRP1-214ENST00000622789 NIPBLQ6KC79 2804 aaeCLIP15.25■□□□□ 0.033e-9■■□□□ 14.3
ARFRP1-214ENST00000622789 TIA1P31483 386 aaKnown RBP eCLIP19.8■□□□□ 0.762e-13■■□□□ 14.2
ARFRP1-214ENST00000622789 PPIGQ13427 754 aaKnown RBP eCLIP19.72■□□□□ 0.758e-10■■□□□ 14
ARFRP1-214ENST00000622789 HNRNPMP52272 730 aaKnown RBP eCLIP28.63■■■□□ 2.171e-7■■□□□ 13.7
ARFRP1-214ENST00000622789 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.4■■□□□ 1.342e-9■■□□□ 13.6
ARFRP1-214ENST00000622789 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.02■■□□□ 1.129e-8■■□□□ 13.3
ARFRP1-214ENST00000622789 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.65■□□□□ 0.99e-6■■□□□ 12.8
ARFRP1-214ENST00000622789 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.36■■□□□ 1.175e-7■■□□□ 12.3
ARFRP1-214ENST00000622789 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.83■□□□□ 0.131e-8■■□□□ 12.1
ARFRP1-214ENST00000622789 SUB1P53999 127 aaKnown RBP eCLIP16.47■□□□□ 0.234e-6■■□□□ 11.9
ARFRP1-214ENST00000622789 RBM22Q9NW64 420 aaKnown RBP eCLIP20.87■□□□□ 0.934e-8■■□□□ 11.8
ARFRP1-214ENST00000622789 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.82■■□□□ 1.088e-8■■□□□ 11.8
ARFRP1-214ENST00000622789 CSTF2P33240 577 aaKnown RBP eCLIP19.38■□□□□ 0.694e-7■■□□□ 11.7
ARFRP1-214ENST00000622789 CDC40O60508 579 aaKnown RBP eCLIP18.61■□□□□ 0.576e-8■■□□□ 11.7
ARFRP1-214ENST00000622789 RBM15Q96T37 977 aaKnown RBP eCLIP21.78■■□□□ 1.086e-17■□□□□ 11.2
ARFRP1-214ENST00000622789 TROVE2P10155 538 aaKnown RBP eCLIP21.32■■□□□ 11e-9■□□□□ 10.9
ARFRP1-214ENST00000622789 NKRFO15226 690 aaKnown RBP eCLIP23.21■■□□□ 1.312e-7■□□□□ 9.9
ARFRP1-214ENST00000622789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.3■■■□□ 2.126e-10■□□□□ 8.9
ARFRP1-214ENST00000622789 NOLC1Q14978 699 aaKnown RBP eCLIP24.2■■□□□ 1.469e-6■□□□□ 8.9
ARFRP1-214ENST00000622789 HNRNPKP61978 463 aaKnown RBP eCLIP18.56■□□□□ 0.561e-7■□□□□ 8.8
ARFRP1-214ENST00000622789 YBX3P16989 372 aaKnown RBP eCLIP21.31■■□□□ 11e-7■□□□□ 8.1
ARFRP1-214ENST00000622789 ZNF622Q969S3 477 aaKnown RBP eCLIP22.84■■□□□ 1.253e-6■□□□□ 8.1
ARFRP1-214ENST00000622789 IGF2BP3O00425 579 aaKnown RBP eCLIP21.57■■□□□ 1.041e-6■□□□□ 8.1
Retrieved 71 of 71 RNA–protein pairs in 10.4 ms