RNA–Protein interactions for RNA: ENST00000617190.4

LRRC41-207, Transcript of leucine rich repeat containing 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC41, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-207ENST00000617190 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.91□□□□□ -0.342e-6■■■■■ 117.5
LRRC41-207ENST00000617190 SF3B4Q15427 424 aaKnown RBP eCLIP11.22□□□□□ -0.612e-14■■■■■ 73.1
LRRC41-207ENST00000617190 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.3□□□□□ -0.447e-8■■■■■ 50.2
LRRC41-207ENST00000617190 SF3B1O75533 1304 aaKnown RBP eCLIP11.59□□□□□ -0.551e-7■■■■■ 44.4
LRRC41-207ENST00000617190 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.62□□□□□ -0.392e-6■■■■■ 42.2
LRRC41-207ENST00000617190 PCBP2Q15366 365 aaKnown RBP eCLIP11.26□□□□□ -0.614e-11■■■■■ 42
LRRC41-207ENST00000617190 FTOQ9C0B1 505 aaKnown RBP eCLIP13.42□□□□□ -0.265e-8■■■■■ 37.8
LRRC41-207ENST00000617190 FMR1Q06787 632 aaKnown RBP eCLIP12.94□□□□□ -0.345e-10■■■■■ 37
LRRC41-207ENST00000617190 GTF2F1P35269 517 aaKnown RBP eCLIP13.51□□□□□ -0.254e-7■■■■■ 36.8
LRRC41-207ENST00000617190 AQRO60306 1485 aaKnown RBP eCLIP14.84□□□□□ -0.031e-7■■■■■ 32.5
LRRC41-207ENST00000617190 HNRNPUQ00839 825 aaKnown RBP eCLIP16.2■□□□□ 0.182e-9■■■■■ 29.3
LRRC41-207ENST00000617190 PCBP1Q15365 356 aaKnown RBP eCLIP11.38□□□□□ -0.592e-7■■■■■ 29.2
LRRC41-207ENST00000617190 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.81□□□□□ -0.683e-10■■■■□ 26.6
LRRC41-207ENST00000617190 NONOQ15233 471 aaKnown RBP eCLIP12.87□□□□□ -0.355e-7■■■■□ 26.3
LRRC41-207ENST00000617190 TIA1P31483 386 aaKnown RBP eCLIP11.09□□□□□ -0.639e-12■■■■□ 25.4
LRRC41-207ENST00000617190 METAP2P50579 478 aaKnown RBP eCLIP13.38□□□□□ -0.271e-6■■■■□ 25.4
LRRC41-207ENST00000617190 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.27□□□□□ -0.616e-7■■■■□ 25.1
LRRC41-207ENST00000617190 WDR43Q15061 677 aaKnown RBP eCLIP15.37■□□□□ 0.055e-7■■■■□ 23.4
LRRC41-207ENST00000617190 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.58□□□□□ -0.568e-7■■■■□ 22.2
LRRC41-207ENST00000617190 TIAL1Q01085 375 aaKnown RBP eCLIP10.99□□□□□ -0.651e-8■■■■□ 22.2
LRRC41-207ENST00000617190 LSM11P83369 360 aaKnown RBP eCLIP10.85□□□□□ -0.674e-6■■■■□ 22.2
LRRC41-207ENST00000617190 PRPF4O43172 522 aaKnown RBP eCLIP11.89□□□□□ -0.511e-7■■■■□ 22.1
LRRC41-207ENST00000617190 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.11□□□□□ -0.474e-8■■■■□ 21.9
LRRC41-207ENST00000617190 FKBP4Q02790 459 aaKnown RBP eCLIP13.7□□□□□ -0.222e-7■■■■□ 21.6
LRRC41-207ENST00000617190 RBM15Q96T37 977 aaKnown RBP eCLIP12.33□□□□□ -0.445e-8■■■■□ 21.5
LRRC41-207ENST00000617190 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.425e-6■■■■□ 21.3
LRRC41-207ENST00000617190 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.72□□□□□ -0.532e-6■■■■□ 20.9
LRRC41-207ENST00000617190 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.54□□□□□ -0.561e-7■■■■□ 20.9
LRRC41-207ENST00000617190 PTBP1P26599 531 aaKnown RBP eCLIP10.58□□□□□ -0.721e-26■■■■□ 20.7
LRRC41-207ENST00000617190 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■■■□ 20.5
LRRC41-207ENST00000617190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.69□□□□□ -0.062e-10■■■■□ 20.1
LRRC41-207ENST00000617190 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.84□□□□□ -0.833e-9■■■■□ 20.1
LRRC41-207ENST00000617190 PABPC4Q13310 644 aaKnown RBP eCLIP12.75□□□□□ -0.375e-8■■■■□ 19.8
LRRC41-207ENST00000617190 AARSP49588 968 aaKnown RBP eCLIP12.41□□□□□ -0.421e-6■■■■□ 19.6
LRRC41-207ENST00000617190 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.05□□□□□ -0.642e-6■■■■□ 19.5
LRRC41-207ENST00000617190 RPS3P23396 243 aaKnown RBP eCLIP11.08□□□□□ -0.649e-7■■■■□ 19.5
LRRC41-207ENST00000617190 EWSR1Q01844 656 aaKnown RBP eCLIP10.11□□□□□ -0.792e-7■■■□□ 17.7
LRRC41-207ENST00000617190 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.9□□□□□ -0.52e-6■■■□□ 17.1
LRRC41-207ENST00000617190 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.14□□□□□ -0.312e-6■■■□□ 17
LRRC41-207ENST00000617190 SF3A3Q12874 501 aaKnown RBP eCLIP13.11□□□□□ -0.315e-8■■■□□ 17
LRRC41-207ENST00000617190 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.56□□□□□ -0.41e-6■■■□□ 16.6
LRRC41-207ENST00000617190 DDX42Q86XP3 938 aaKnown RBP eCLIP12.65□□□□□ -0.383e-6■■■□□ 16.1
LRRC41-207ENST00000617190 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.9□□□□□ -0.51e-6■■■□□ 15.9
LRRC41-207ENST00000617190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.44□□□□□ -0.424e-8■■■□□ 15.6
LRRC41-207ENST00000617190 DDX3XO00571 662 aaKnown RBP eCLIP12.35□□□□□ -0.433e-8■■■□□ 15.4
LRRC41-207ENST00000617190 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.44□□□□□ -0.261e-6■■■□□ 14.8
LRRC41-207ENST00000617190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.64□□□□□ -0.236e-7■■■□□ 14.8
LRRC41-207ENST00000617190 DDX6P26196 483 aaKnown RBP eCLIP10.95□□□□□ -0.662e-6■■■□□ 14.7
LRRC41-207ENST00000617190 PPIGQ13427 754 aaKnown RBP eCLIP11.17□□□□□ -0.623e-8■■□□□ 14.5
LRRC41-207ENST00000617190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.86□□□□□ -0.351e-6■■□□□ 14.2
LRRC41-207ENST00000617190 QKIQ96PU8 341 aaKnown RBP eCLIP11.69□□□□□ -0.544e-7■■□□□ 14.1
LRRC41-207ENST00000617190 RBM22Q9NW64 420 aaKnown RBP eCLIP11.8□□□□□ -0.522e-6■■□□□ 13.7
LRRC41-207ENST00000617190 G3BP1Q13283 466 aaKnown RBP eCLIP13.92□□□□□ -0.186e-7■■□□□ 13.5
LRRC41-207ENST00000617190 YBX3P16989 372 aaKnown RBP eCLIP11.79□□□□□ -0.523e-8■■□□□ 13.2
LRRC41-207ENST00000617190 FUSP35637 526 aaKnown RBP eCLIP8.09□□□□□ -1.113e-7■■□□□ 13.1
LRRC41-207ENST00000617190 EFTUD2Q15029 972 aaKnown RBP eCLIP12.09□□□□□ -0.471e-7■■□□□ 12.9
LRRC41-207ENST00000617190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.095e-8■■□□□ 12.8
LRRC41-207ENST00000617190 NCBP2P52298 156 aaKnown RBP eCLIP11.11□□□□□ -0.632e-6■■□□□ 12.6
LRRC41-207ENST00000617190 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.52□□□□□ -0.411e-6■□□□□ 10.5
LRRC41-207ENST00000617190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.22□□□□□ -0.454e-21■□□□□ 10.3
LRRC41-207ENST00000617190 MATR3P43243 847 aaKnown RBP eCLIP13.29□□□□□ -0.284e-7■□□□□ 10.2
LRRC41-207ENST00000617190 WRNQ14191 1432 aaPredicted RBP eCLIP16.16■□□□□ 0.185e-7■□□□□ 10
LRRC41-207ENST00000617190 SAFB2Q14151 953 aaKnown RBP eCLIP14.99□□□□□ -0.017e-7■□□□□ 9.1
LRRC41-207ENST00000617190 HNRNPMP52272 730 aaKnown RBP eCLIP15.09■□□□□ 0.012e-6■□□□□ 8.9
LRRC41-207ENST00000617190 U2AF2P26368 475 aaKnown RBP eCLIP13.62□□□□□ -0.238e-11■□□□□ 8.6
LRRC41-207ENST00000617190 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.97□□□□□ -0.657e-11■□□□□ 8.5
LRRC41-207ENST00000617190 SRSF1Q07955 248 aaKnown RBP eCLIP9.14□□□□□ -0.954e-7■□□□□ 8.4
LRRC41-207ENST00000617190 HNRNPLP14866 589 aaKnown RBP eCLIP11.84□□□□□ -0.513e-8■□□□□ 8.4
Retrieved 68 of 68 RNA–protein pairs in 8.8 ms