RNA–Protein interactions for RNA: ENST00000537526.6

USP22-206, Transcript of ubiquitin specific peptidase 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP22, Length 4,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-206ENST00000537526 ZC3H11AO75152 810 aaKnown RBP eCLIP13.88□□□□□ -0.196e-33■■■■■ 133.5
USP22-206ENST00000537526 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.62□□□□□ -0.396e-20■■■■■ 30.4
USP22-206ENST00000537526 DDX3XO00571 662 aaKnown RBP eCLIP13.73□□□□□ -0.213e-18■■■□□ 18.2
USP22-206ENST00000537526 UPF1Q92900 1129 aaKnown RBP eCLIP13□□□□□ -0.332e-14■■■■■ 56.6
USP22-206ENST00000537526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.74□□□□□ -0.051e-12■□□□□ 9.1
USP22-206ENST00000537526 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.4□□□□□ -0.424e-12■■■■■ 55.7
USP22-206ENST00000537526 HNRNPLP14866 589 aaKnown RBP eCLIP13.24□□□□□ -0.297e-12■■■■■ 39.8
USP22-206ENST00000537526 RPS3P23396 243 aaKnown RBP eCLIP12.72□□□□□ -0.371e-11■■■■□ 25.3
USP22-206ENST00000537526 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.15■□□□□ 0.022e-11■□□□□ 8.7
USP22-206ENST00000537526 PRPF4O43172 522 aaKnown RBP eCLIP13.49□□□□□ -0.252e-10■■■■□ 25
USP22-206ENST00000537526 AGGF1Q8N302 714 aaeCLIP14□□□□□ -0.173e-10■□□□□ 9.2
USP22-206ENST00000537526 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.73□□□□□ -0.215e-10■■■□□ 14.8
USP22-206ENST00000537526 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.47□□□□□ -0.419e-10■■■■□ 22.5
USP22-206ENST00000537526 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.28□□□□□ -0.122e-9■■■■■ 44.1
USP22-206ENST00000537526 FUBP3Q96I24 572 aaKnown RBP eCLIP13.07□□□□□ -0.322e-9■■■□□ 18.7
USP22-206ENST00000537526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.48■□□□□ 0.392e-9■□□□□ 9.8
USP22-206ENST00000537526 ILF3Q12906 894 aaKnown RBP eCLIP12.78□□□□□ -0.363e-9■■■□□ 16
USP22-206ENST00000537526 CSTF2P33240 577 aaKnown RBP eCLIP12.84□□□□□ -0.358e-9■■□□□ 13.9
USP22-206ENST00000537526 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.13■□□□□ 0.011e-8■□□□□ 9.3
USP22-206ENST00000537526 PCBP2Q15366 365 aaKnown RBP eCLIP12.74□□□□□ -0.371e-8■■■■■ 49.2
USP22-206ENST00000537526 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.88□□□□□ -0.352e-8■■□□□ 11.8
USP22-206ENST00000537526 QKIQ96PU8 341 aaKnown RBP eCLIP13.31□□□□□ -0.283e-8■■■■□ 19.6
USP22-206ENST00000537526 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.194e-8■■■■■ 31.3
USP22-206ENST00000537526 PCBP1Q15365 356 aaKnown RBP eCLIP13.45□□□□□ -0.265e-8■■■■□ 26.3
USP22-206ENST00000537526 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.31□□□□□ -0.285e-8■□□□□ 8.5
USP22-206ENST00000537526 DDX6P26196 483 aaKnown RBP eCLIP12.8□□□□□ -0.368e-8■■■□□ 16.3
USP22-206ENST00000537526 TARDBPQ13148 414 aaKnown RBP eCLIP12.86□□□□□ -0.351e-7■■■□□ 16.2
USP22-206ENST00000537526 TIA1P31483 386 aaKnown RBP eCLIP12.73□□□□□ -0.371e-7■■■□□ 17
USP22-206ENST00000537526 KHSRPQ92945 711 aaKnown RBP eCLIP12.54□□□□□ -0.41e-7■■■□□ 15.1
USP22-206ENST00000537526 PUM1Q14671 1186 aaKnown RBP eCLIP12.63□□□□□ -0.392e-7■■■□□ 17
USP22-206ENST00000537526 PTBP1P26599 531 aaKnown RBP eCLIP12.39□□□□□ -0.432e-7■■■■□ 22.6
USP22-206ENST00000537526 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.22□□□□□ -0.133e-7■■□□□ 13.8
USP22-206ENST00000537526 G3BP1Q13283 466 aaKnown RBP eCLIP15.99■□□□□ 0.154e-7■■■■□ 24.8
USP22-206ENST00000537526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.44□□□□□ -0.14e-7■■□□□ 11.9
USP22-206ENST00000537526 AKAP1Q92667 903 aaKnown RBP eCLIP12.66□□□□□ -0.384e-7■■■■□ 23.7
USP22-206ENST00000537526 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.63□□□□□ -0.234e-7■■□□□ 11.7
USP22-206ENST00000537526 HNRNPMP52272 730 aaKnown RBP eCLIP16.65■□□□□ 0.264e-7■■■□□ 19.1
USP22-206ENST00000537526 YBX3P16989 372 aaKnown RBP eCLIP13.43□□□□□ -0.266e-7■□□□□ 9.5
USP22-206ENST00000537526 GTF2F1P35269 517 aaKnown RBP eCLIP15.08■□□□□ 06e-7■■■■■ 34.6
USP22-206ENST00000537526 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.05■□□□□ 07e-7■■■■■ 116.7
USP22-206ENST00000537526 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.27□□□□□ -0.778e-7■■■■□ 23.1
USP22-206ENST00000537526 PPIGQ13427 754 aaKnown RBP eCLIP12.72□□□□□ -0.371e-6■□□□□ 8.9
USP22-206ENST00000537526 ZNF622Q969S3 477 aaKnown RBP eCLIP14.67□□□□□ -0.061e-6■■□□□ 12.3
USP22-206ENST00000537526 SF3B4Q15427 424 aaKnown RBP eCLIP12.2□□□□□ -0.461e-6■■■□□ 17.7
USP22-206ENST00000537526 FMR1Q06787 632 aaKnown RBP eCLIP14.19□□□□□ -0.141e-6■■■□□ 16.1
USP22-206ENST00000537526 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.68□□□□□ -0.221e-6■■□□□ 11.8
USP22-206ENST00000537526 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.03□□□□□ -0.481e-6■■■□□ 17.7
USP22-206ENST00000537526 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.27■□□□□ 0.22e-6■■□□□ 13.9
USP22-206ENST00000537526 HNRNPKP61978 463 aaKnown RBP eCLIP12.32□□□□□ -0.442e-6■■■□□ 18.3
USP22-206ENST00000537526 HNRNPCP07910 306 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■□□□□ 10.2
USP22-206ENST00000537526 RBM22Q9NW64 420 aaKnown RBP eCLIP13.48□□□□□ -0.252e-6■□□□□ 11.1
USP22-206ENST00000537526 EFTUD2Q15029 972 aaKnown RBP eCLIP13.87□□□□□ -0.192e-6■■■■■ 33.5
USP22-206ENST00000537526 PABPC4Q13310 644 aaKnown RBP eCLIP14.35□□□□□ -0.112e-6■■■□□ 16
USP22-206ENST00000537526 GRSF1Q12849 480 aaKnown RBP eCLIP12.62□□□□□ -0.392e-6■■□□□ 12.4
USP22-206ENST00000537526 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.25□□□□□ -0.293e-6■■■■□ 24.9
USP22-206ENST00000537526 NKRFO15226 690 aaKnown RBP eCLIP13.52□□□□□ -0.253e-6■■□□□ 12.1
USP22-206ENST00000537526 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.93□□□□□ -0.023e-6■■■■■ 44.1
USP22-206ENST00000537526 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.96□□□□□ -0.184e-6■■□□□ 14.1
USP22-206ENST00000537526 MATR3P43243 847 aaKnown RBP eCLIP14.93□□□□□ -0.024e-6■■□□□ 13.8
USP22-206ENST00000537526 SUB1P53999 127 aaKnown RBP eCLIP11.77□□□□□ -0.534e-6■■■■■ 28.5
USP22-206ENST00000537526 GPKOWQ92917 476 aaPredicted RBP eCLIP14.49□□□□□ -0.094e-6■□□□□ 10.4
USP22-206ENST00000537526 SF3B1O75533 1304 aaKnown RBP eCLIP13.2□□□□□ -0.35e-6■■■■■ 67.5
USP22-206ENST00000537526 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.47□□□□□ -0.255e-6■■■■■ 29.2
Retrieved 63 of 63 RNA–protein pairs in 13.8 ms