RNA–Protein interactions for RNA: ENST00000465814.5

ARAP1-210, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

TSL 2

Gene ARAP1, Length 5,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-210ENST00000465814 SF3B1O75533 1304 aaKnown RBP eCLIP15.15■□□□□ 0.022e-6■■■■■ 196.3
ARAP1-210ENST00000465814 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.94□□□□□ -0.022e-6■■■■■ 154.2
ARAP1-210ENST00000465814 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.94■□□□□ 0.461e-6■■■■■ 110.5
ARAP1-210ENST00000465814 AARSP49588 968 aaKnown RBP eCLIP15.87■□□□□ 0.132e-17■■■■■ 92.7
ARAP1-210ENST00000465814 TARDBPQ13148 414 aaKnown RBP eCLIP14.67□□□□□ -0.062e-9■■■■■ 47.5
ARAP1-210ENST00000465814 UPF1Q92900 1129 aaKnown RBP eCLIP14.5□□□□□ -0.092e-9■■■■■ 40.8
ARAP1-210ENST00000465814 GTF2F1P35269 517 aaKnown RBP eCLIP17.39■□□□□ 0.382e-7■■■■■ 37.9
ARAP1-210ENST00000465814 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.76□□□□□ -0.211e-10■■■■■ 36.2
ARAP1-210ENST00000465814 RBM22Q9NW64 420 aaKnown RBP eCLIP15.18■□□□□ 0.022e-8■■■■■ 35.4
ARAP1-210ENST00000465814 EIF4G2P78344 907 aaKnown RBP eCLIP19.46■□□□□ 0.712e-7■■■■■ 33.9
ARAP1-210ENST00000465814 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.25□□□□□ -0.132e-9■■■■■ 33.1
ARAP1-210ENST00000465814 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.35e-7■■■■■ 32.8
ARAP1-210ENST00000465814 AATFQ9NY61 560 aaKnown RBP eCLIP16.37■□□□□ 0.213e-6■■■■■ 31.9
ARAP1-210ENST00000465814 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.55■□□□□ 0.086e-8■■■■■ 31.6
ARAP1-210ENST00000465814 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.49■□□□□ 0.394e-7■■■■■ 29
ARAP1-210ENST00000465814 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.11■□□□□ 0.171e-6■■■■■ 28.6
ARAP1-210ENST00000465814 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.36□□□□□ -0.113e-6■■■■■ 26.9
ARAP1-210ENST00000465814 SF3B4Q15427 424 aaKnown RBP eCLIP13.82□□□□□ -0.22e-6■■■■□ 26.5
ARAP1-210ENST00000465814 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.32■□□□□ 0.041e-6■■■■□ 26.1
ARAP1-210ENST00000465814 EFTUD2Q15029 972 aaKnown RBP eCLIP15.87■□□□□ 0.135e-7■■■■□ 25.5
ARAP1-210ENST00000465814 MATR3P43243 847 aaKnown RBP eCLIP17.39■□□□□ 0.372e-6■■■■□ 23.9
ARAP1-210ENST00000465814 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.553e-14■■■■□ 23.5
ARAP1-210ENST00000465814 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.86□□□□□ -0.036e-7■■■■□ 23.3
ARAP1-210ENST00000465814 DKC1O60832 514 aaKnown RBP eCLIP16.31■□□□□ 0.21e-6■■■■□ 23.2
ARAP1-210ENST00000465814 HNRNPKP61978 463 aaKnown RBP eCLIP14.26□□□□□ -0.131e-6■■■■□ 22.7
ARAP1-210ENST00000465814 PTBP1P26599 531 aaKnown RBP eCLIP13.61□□□□□ -0.238e-10■■■■□ 22.3
ARAP1-210ENST00000465814 HNRNPLP14866 589 aaKnown RBP eCLIP14.98□□□□□ -0.012e-9■■■■□ 22
ARAP1-210ENST00000465814 SUB1P53999 127 aaKnown RBP eCLIP13.58□□□□□ -0.236e-6■■■■□ 21.9
ARAP1-210ENST00000465814 DDX3XO00571 662 aaKnown RBP eCLIP15.06■□□□□ 01e-33■■■■□ 21.7
ARAP1-210ENST00000465814 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.23□□□□□ -0.131e-7■■■■□ 21.4
ARAP1-210ENST00000465814 SF3A3Q12874 501 aaKnown RBP eCLIP16.75■□□□□ 0.272e-8■■■■□ 20.9
ARAP1-210ENST00000465814 RBFOX2O43251 390 aaKnown RBP eCLIP12.9□□□□□ -0.348e-7■■■■□ 20.5
ARAP1-210ENST00000465814 RPS3P23396 243 aaKnown RBP eCLIP14.54□□□□□ -0.083e-6■■■■□ 20.1
ARAP1-210ENST00000465814 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.48□□□□□ -0.572e-7■■■■□ 19.6
ARAP1-210ENST00000465814 CDC40O60508 579 aaKnown RBP eCLIP14.92□□□□□ -0.021e-6■■■■□ 19.5
ARAP1-210ENST00000465814 NIPBLQ6KC79 2804 aaeCLIP7.87□□□□□ -1.152e-6■■■■□ 19.3
ARAP1-210ENST00000465814 GRSF1Q12849 480 aaKnown RBP eCLIP14.78□□□□□ -0.041e-18■■■□□ 18.5
ARAP1-210ENST00000465814 HNRNPMP52272 730 aaKnown RBP eCLIP18.01■□□□□ 0.471e-9■■■□□ 17.8
ARAP1-210ENST00000465814 PPIGQ13427 754 aaKnown RBP eCLIP14.25□□□□□ -0.138e-8■■■□□ 16.8
ARAP1-210ENST00000465814 FXR2P51116 673 aaKnown RBP eCLIP15.27■□□□□ 0.031e-6■■■□□ 16.7
ARAP1-210ENST00000465814 PCBP2Q15366 365 aaKnown RBP eCLIP14.58□□□□□ -0.072e-6■■■□□ 16.7
ARAP1-210ENST00000465814 ZC3H11AO75152 810 aaKnown RBP eCLIP15.13■□□□□ 0.016e-6■■■□□ 16.5
ARAP1-210ENST00000465814 AKAP1Q92667 903 aaKnown RBP eCLIP14.56□□□□□ -0.087e-9■■■□□ 16.3
ARAP1-210ENST00000465814 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.1■□□□□ 0.333e-6■■■□□ 15.8
ARAP1-210ENST00000465814 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.6■□□□□ 0.252e-7■■■□□ 15.7
ARAP1-210ENST00000465814 SRSF1Q07955 248 aaKnown RBP eCLIP12.47□□□□□ -0.417e-8■■■□□ 15.7
ARAP1-210ENST00000465814 ZNF622Q969S3 477 aaKnown RBP eCLIP16.69■□□□□ 0.269e-7■■■□□ 15.5
ARAP1-210ENST00000465814 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.99■□□□□ 0.311e-6■■■□□ 15.3
ARAP1-210ENST00000465814 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.8■□□□□ 0.125e-8■■□□□ 14.5
ARAP1-210ENST00000465814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.66■□□□□ 0.743e-7■■□□□ 14.4
ARAP1-210ENST00000465814 SMNDC1O75940 238 aaKnown RBP eCLIP15.53■□□□□ 0.087e-6■■□□□ 14.3
ARAP1-210ENST00000465814 PCBP1Q15365 356 aaKnown RBP eCLIP14.57□□□□□ -0.082e-7■■□□□ 14.3
ARAP1-210ENST00000465814 PRPF4O43172 522 aaKnown RBP eCLIP15.72■□□□□ 0.116e-7■■□□□ 14
ARAP1-210ENST00000465814 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.61□□□□□ -0.073e-6■■□□□ 13.2
ARAP1-210ENST00000465814 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.46■□□□□ 0.076e-8■■□□□ 13.1
ARAP1-210ENST00000465814 ILF3Q12906 894 aaKnown RBP eCLIP14.51□□□□□ -0.097e-11■■□□□ 13
ARAP1-210ENST00000465814 G3BP1Q13283 466 aaKnown RBP eCLIP17.95■□□□□ 0.465e-7■■□□□ 12.7
ARAP1-210ENST00000465814 DDX42Q86XP3 938 aaKnown RBP eCLIP15.71■□□□□ 0.19e-9■■□□□ 12.4
ARAP1-210ENST00000465814 EIF3HO15372 352 aaKnown RBP eCLIP15.69■□□□□ 0.13e-6■■□□□ 12.3
ARAP1-210ENST00000465814 PABPN1Q86U42 306 aaKnown RBP eCLIP19.91■□□□□ 0.781e-6■■□□□ 12
ARAP1-210ENST00000465814 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.79■□□□□ 0.283e-6■■□□□ 11.4
ARAP1-210ENST00000465814 FMR1Q06787 632 aaKnown RBP eCLIP15.59■□□□□ 0.091e-6■■□□□ 11.4
ARAP1-210ENST00000465814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.51■□□□□ 0.075e-7■□□□□ 11.2
ARAP1-210ENST00000465814 TIA1P31483 386 aaKnown RBP eCLIP14.2□□□□□ -0.141e-5■□□□□ 11
ARAP1-210ENST00000465814 U2AF2P26368 475 aaKnown RBP eCLIP16.88■□□□□ 0.293e-6■□□□□ 10.6
ARAP1-210ENST00000465814 LSM11P83369 360 aaKnown RBP eCLIP13.29□□□□□ -0.283e-6■□□□□ 10.5
ARAP1-210ENST00000465814 RBM5P52756 815 aaKnown RBP eCLIP17.34■□□□□ 0.371e-6■□□□□ 10
ARAP1-210ENST00000465814 NKRFO15226 690 aaKnown RBP eCLIP14.82□□□□□ -0.048e-7■□□□□ 9.8
ARAP1-210ENST00000465814 GPKOWQ92917 476 aaPredicted RBP eCLIP16.22■□□□□ 0.195e-7■□□□□ 9.3
ARAP1-210ENST00000465814 TROVE2P10155 538 aaKnown RBP eCLIP16.47■□□□□ 0.231e-14■□□□□ 9.3
ARAP1-210ENST00000465814 DDX6P26196 483 aaKnown RBP eCLIP14.63□□□□□ -0.077e-7■□□□□ 9.2
ARAP1-210ENST00000465814 SLBPQ14493 270 aaKnown RBP eCLIP14.5□□□□□ -0.096e-8■□□□□ 8.7
ARAP1-210ENST00000465814 SRSF9Q13242 221 aaKnown RBP eCLIP13.22□□□□□ -0.292e-6■□□□□ 8.7
ARAP1-210ENST00000465814 SRSF7Q16629 238 aaKnown RBP eCLIP12.12□□□□□ -0.473e-6■□□□□ 8.6
ARAP1-210ENST00000465814 EIF3DO15371 548 aaKnown RBP eCLIP15.33■□□□□ 0.041e-7■□□□□ 8.6
ARAP1-210ENST00000465814 AGGF1Q8N302 714 aaeCLIP15.68■□□□□ 0.13e-6■□□□□ 8.5
ARAP1-210ENST00000465814 TRA2AQ13595 282 aaKnown RBP eCLIP12.96□□□□□ -0.341e-7■□□□□ 8.2
Retrieved 77 of 77 RNA–protein pairs in 15.2 ms