RNA–Protein interactions for RNA: ENST00000395792.6

AFP-202, Transcript of alpha fetoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFP, Length 2,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-202ENST00000395792 DNAJC5BQ9UF47 199 aa9.63□□□□□ -0.87
AFP-202ENST00000395792 TPRNQ4KMQ1 711 aa9.63□□□□□ -0.87
AFP-202ENST00000395792 TARBP1Q13395 1621 aaKnown RBP9.63□□□□□ -0.87
AFP-202ENST00000395792 EIF5BO60841 1220 aaKnown RBP9.61□□□□□ -0.87
AFP-202ENST00000395792 IFT140Q96RY7 1462 aa9.61□□□□□ -0.87
AFP-202ENST00000395792 CARMIL1Q5VZK9 1371 aa9.61□□□□□ -0.87
AFP-202ENST00000395792 KLHL34Q8N239 644 aa9.59□□□□□ -0.87
AFP-202ENST00000395792 CLIP1P30622 1438 aa9.59□□□□□ -0.87
AFP-202ENST00000395792 RAD54L2Q9Y4B4 1467 aa9.59□□□□□ -0.87
AFP-202ENST00000395792 TRIM26Q12899 539 aaPredicted RBP9.58□□□□□ -0.88
AFP-202ENST00000395792 GAPVD1Q14C86 1478 aa9.58□□□□□ -0.88
AFP-202ENST00000395792 THOC2Q8NI27 1593 aaKnown RBP9.57□□□□□ -0.88
AFP-202ENST00000395792 ERCC6Q03468 1493 aa9.57□□□□□ -0.88
AFP-202ENST00000395792 PODXL2Q9NZ53 605 aa9.56□□□□□ -0.88
AFP-202ENST00000395792 VPS8Q8N3P4 1428 aa9.55□□□□□ -0.88
AFP-202ENST00000395792 PBRM1Q86U86 1689 aa9.55□□□□□ -0.88
AFP-202ENST00000395792 CTTNBP2Q8WZ74 1663 aa9.54□□□□□ -0.88
AFP-202ENST00000395792 EFCAB5A4FU69 1503 aa9.53□□□□□ -0.88
AFP-202ENST00000395792 GRIN2BQ13224 1484 aa9.53□□□□□ -0.88
AFP-202ENST00000395792 GTF3C3Q9Y5Q9 886 aa9.53□□□□□ -0.88
AFP-202ENST00000395792 SLC4A1APQ9BWU0 796 aaKnown RBP9.51□□□□□ -0.89
AFP-202ENST00000395792 FHAD1B1AJZ9 1412 aa9.51□□□□□ -0.89
AFP-202ENST00000395792 ADAMTS12P58397 1594 aa9.5□□□□□ -0.89
AFP-202ENST00000395792 MAP3K1Q13233 1512 aa9.49□□□□□ -0.89
AFP-202ENST00000395792 ARAP1Q96P48 1450 aa9.48□□□□□ -0.89
AFP-202ENST00000395792 TDRD9Q8NDG6 1382 aaKnown RBP9.48□□□□□ -0.89
AFP-202ENST00000395792 ARHGAP35Q9NRY4 1499 aa9.48□□□□□ -0.89
AFP-202ENST00000395792 PLCB2Q00722 1185 aa9.47□□□□□ -0.89
AFP-202ENST00000395792 MAGI1Q96QZ7 1491 aaPredicted RBP9.47□□□□□ -0.89
AFP-202ENST00000395792 AQRO60306 1485 aaKnown RBP eCLIP9.46□□□□□ -0.94e-18■■■■■ 34.5
AFP-202ENST00000395792 EIF4G3O43432 1585 aaKnown RBP9.45□□□□□ -0.9
AFP-202ENST00000395792 SENP3Q9H4L4 574 aaPredicted RBP9.45□□□□□ -0.9
AFP-202ENST00000395792 PCGF6Q9BYE7 350 aa9.45□□□□□ -0.9
AFP-202ENST00000395792 SAMD9Q5K651 1589 aa9.44□□□□□ -0.9
AFP-202ENST00000395792 ADRA2BP18089 450 aa9.44□□□□□ -0.9
AFP-202ENST00000395792 FMN1Q68DA7 1419 aa9.41□□□□□ -0.9
AFP-202ENST00000395792 ZNF608Q9ULD9 1512 aaPredicted RBP9.4□□□□□ -0.9
AFP-202ENST00000395792 HAP1P54257 671 aaPredicted RBP9.4□□□□□ -0.9
AFP-202ENST00000395792 SYNJ2O15056 1496 aa9.4□□□□□ -0.9
AFP-202ENST00000395792 FYCO1Q9BQS8 1478 aa9.4□□□□□ -0.9
AFP-202ENST00000395792 IQGAP2Q13576 1575 aa9.4□□□□□ -0.9
AFP-202ENST00000395792 UGGT2Q9NYU1 1516 aa9.4□□□□□ -0.9
AFP-202ENST00000395792 SNAPC4Q5SXM2 1469 aa9.39□□□□□ -0.91
AFP-202ENST00000395792 KIAA0586Q9BVV6 1533 aa9.39□□□□□ -0.91
AFP-202ENST00000395792 CASKIN1Q8WXD9 1431 aa9.38□□□□□ -0.91
AFP-202ENST00000395792 GRIN2AQ12879 1464 aa9.38□□□□□ -0.91
AFP-202ENST00000395792 NPM2Q86SE8 214 aaKnown RBP9.38□□□□□ -0.91
AFP-202ENST00000395792 CFAP43Q8NDM7 1665 aa9.38□□□□□ -0.91
AFP-202ENST00000395792 TIAM1Q13009 1591 aa9.36□□□□□ -0.91
AFP-202ENST00000395792 ZEB1P37275 1124 aaPredicted RBP9.34□□□□□ -0.91
AFP-202ENST00000395792 NUP160Q12769 1436 aa9.34□□□□□ -0.91
AFP-202ENST00000395792 HRCP23327 699 aa9.33□□□□□ -0.92
AFP-202ENST00000395792 PCF11O94913 1555 aaKnown RBP9.33□□□□□ -0.92
AFP-202ENST00000395792 CCDC18Q5T9S5 1454 aa9.32□□□□□ -0.92
AFP-202ENST00000395792 FHOD3Q2V2M9 1422 aa9.31□□□□□ -0.92
AFP-202ENST00000395792 LRRC9Q6ZRR7 1453 aa9.31□□□□□ -0.92
AFP-202ENST00000395792 HECW1Q76N89 1606 aa9.3□□□□□ -0.92
AFP-202ENST00000395792 CHMP7Q8WUX9 453 aaPredicted RBP9.3□□□□□ -0.92
AFP-202ENST00000395792 RRBP1Q9P2E9 1410 aaKnown RBP9.3□□□□□ -0.92
AFP-202ENST00000395792 KIAA0556O60303 1618 aa9.3□□□□□ -0.92
AFP-202ENST00000395792 CEP170Q5SW79 1584 aa9.3□□□□□ -0.92
AFP-202ENST00000395792 FBXO3Q9UK99 471 aa9.28□□□□□ -0.92
AFP-202ENST00000395792 CARMIL2Q6F5E8 1435 aa9.28□□□□□ -0.92
AFP-202ENST00000395792 TMEM132AQ24JP5 1023 aa9.28□□□□□ -0.92
AFP-202ENST00000395792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.28□□□□□ -0.92
AFP-202ENST00000395792 DISP1Q96F81 1524 aa9.27□□□□□ -0.93
AFP-202ENST00000395792 EHBP1L1Q8N3D4 1523 aa9.26□□□□□ -0.93
AFP-202ENST00000395792 C14orf37Q86TY3 774 aa9.25□□□□□ -0.93
AFP-202ENST00000395792 PPARGC1BQ86YN6 1023 aaKnown RBP9.24□□□□□ -0.93
AFP-202ENST00000395792 CHD1O14646 1710 aa9.24□□□□□ -0.93
AFP-202ENST00000395792 SUPT6HQ7KZ85 1726 aaKnown RBP9.24□□□□□ -0.93
AFP-202ENST00000395792 SHROOM2Q13796 1616 aa9.23□□□□□ -0.93
AFP-202ENST00000395792 RAPGEF6Q8TEU7 1601 aa9.23□□□□□ -0.93
AFP-202ENST00000395792 KANK4Q5T7N3 995 aaPredicted RBP9.23□□□□□ -0.93
AFP-202ENST00000395792 LRRIQ1Q96JM4 1722 aa9.23□□□□□ -0.93
AFP-202ENST00000395792 CCNB3Q8WWL7 1395 aa9.23□□□□□ -0.93
AFP-202ENST00000395792 P3H3Q8IVL6 736 aa9.22□□□□□ -0.93
AFP-202ENST00000395792 EPRSP07814 1512 aaKnown RBP9.21□□□□□ -0.93
AFP-202ENST00000395792 JPH4Q96JJ6 628 aa9.21□□□□□ -0.93
AFP-202ENST00000395792 ARHGEF11O15085 1522 aa9.2□□□□□ -0.94
AFP-202ENST00000395792 VSIG10Q8N0Z9 540 aa9.2□□□□□ -0.94
AFP-202ENST00000395792 MTUS2Q5JR59 1369 aa9.2□□□□□ -0.94
AFP-202ENST00000395792 PPP6R1Q9UPN7 881 aa9.2□□□□□ -0.94
AFP-202ENST00000395792 PLEKHG5O94827 1062 aa9.19□□□□□ -0.94
AFP-202ENST00000395792 CDK11AQ9UQ88 783 aaPredicted RBP9.18□□□□□ -0.94
AFP-202ENST00000395792 ABCA8O94911 1581 aa9.18□□□□□ -0.94
AFP-202ENST00000395792 CLSPNQ9HAW4 1339 aa9.18□□□□□ -0.94
AFP-202ENST00000395792 CLASP1Q7Z460 1538 aa9.17□□□□□ -0.94
AFP-202ENST00000395792 ACIN1Q9UKV3 1341 aaKnown RBP9.17□□□□□ -0.94
AFP-202ENST00000395792 FBLN2P98095 1184 aa9.16□□□□□ -0.94
AFP-202ENST00000395792 MIA2Q96PC5 1412 aa9.16□□□□□ -0.94
AFP-202ENST00000395792 ADCY10Q96PN6 1610 aa9.16□□□□□ -0.94
AFP-202ENST00000395792 NUP153P49790 1475 aaKnown RBP9.16□□□□□ -0.94
AFP-202ENST00000395792 NCOA2Q15596 1464 aa9.16□□□□□ -0.94
AFP-202ENST00000395792 MYOM3Q5VTT5 1437 aa9.15□□□□□ -0.94
AFP-202ENST00000395792 PHLDB1Q86UU1 1377 aa9.15□□□□□ -0.94
AFP-202ENST00000395792 ATP1B4Q9UN42 357 aaPredicted RBP9.15□□□□□ -0.94
AFP-202ENST00000395792 TCOF1Q13428 1488 aaKnown RBP9.15□□□□□ -0.95
AFP-202ENST00000395792 FGD6Q6ZV73 1430 aa9.14□□□□□ -0.95
AFP-202ENST00000395792 PRG4Q92954 1404 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms