RNA–Protein interactions for RNA: ENST00000395792.6

AFP-202, Transcript of alpha fetoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFP, Length 2,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-202ENST00000395792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.59□□□□□ -1.031e-323■□□□□ 8.6
AFP-202ENST00000395792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.81□□□□□ -1.161e-323■■□□□ 12.1
AFP-202ENST00000395792 ZC3H11AO75152 810 aaKnown RBP eCLIP6.66□□□□□ -1.341e-323■□□□□ 8.5
AFP-202ENST00000395792 QKIQ96PU8 341 aaKnown RBP eCLIP6.33□□□□□ -1.41e-323■□□□□ 8.4
AFP-202ENST00000395792 PCBP2Q15366 365 aaKnown RBP eCLIP6.16□□□□□ -1.421e-323■■■■■ 36.6
AFP-202ENST00000395792 LARP4Q71RC2 724 aaKnown RBP eCLIP6.01□□□□□ -1.451e-323■□□□□ 9.9
AFP-202ENST00000395792 AKAP1Q92667 903 aaKnown RBP eCLIP5.48□□□□□ -1.531e-323■□□□□ 9.5
AFP-202ENST00000395792 EIF3DO15371 548 aaKnown RBP eCLIP6.78□□□□□ -1.321e-84■□□□□ 8.8
AFP-202ENST00000395792 DDX3XO00571 662 aaKnown RBP eCLIP6.57□□□□□ -1.364e-80■□□□□ 10.1
AFP-202ENST00000395792 SND1Q7KZF4 910 aaKnown RBP eCLIP7.49□□□□□ -1.217e-75■■■■□ 25.3
AFP-202ENST00000395792 PTBP1P26599 531 aaKnown RBP eCLIP5.96□□□□□ -1.462e-74■■■■■ 35.3
AFP-202ENST00000395792 DKC1O60832 514 aaKnown RBP eCLIP6.82□□□□□ -1.328e-73■□□□□ 10
AFP-202ENST00000395792 RPS3P23396 243 aaKnown RBP eCLIP6.11□□□□□ -1.431e-65■■□□□ 12.4
AFP-202ENST00000395792 DDX6P26196 483 aaKnown RBP eCLIP6.25□□□□□ -1.418e-62■■■□□ 15.8
AFP-202ENST00000395792 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.84□□□□□ -1.484e-55■□□□□ 9.8
AFP-202ENST00000395792 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.84□□□□□ -1.327e-50■□□□□ 9.8
AFP-202ENST00000395792 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.15□□□□□ -1.422e-49■□□□□ 9
AFP-202ENST00000395792 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.7□□□□□ -1.341e-47■■■■□ 26.7
AFP-202ENST00000395792 G3BP1Q13283 466 aaKnown RBP eCLIP7.5□□□□□ -1.213e-45■□□□□ 9.4
AFP-202ENST00000395792 NOLC1Q14978 699 aaKnown RBP eCLIP6.79□□□□□ -1.322e-43■■□□□ 13.6
AFP-202ENST00000395792 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.26□□□□□ -1.416e-43■□□□□ 11
AFP-202ENST00000395792 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.04□□□□□ -1.441e-37■□□□□ 10
AFP-202ENST00000395792 RBM22Q9NW64 420 aaKnown RBP eCLIP6.22□□□□□ -1.413e-36■■■■■ 28
AFP-202ENST00000395792 SF3A3Q12874 501 aaKnown RBP eCLIP5.99□□□□□ -1.457e-33■■■■□ 22.5
AFP-202ENST00000395792 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.71□□□□□ -1.652e-24■■■■■ 28.4
AFP-202ENST00000395792 RBM15Q96T37 977 aaKnown RBP eCLIP6.31□□□□□ -1.41e-23■□□□□ 10.1
AFP-202ENST00000395792 NKRFO15226 690 aaKnown RBP eCLIP6.69□□□□□ -1.341e-23■□□□□ 10.1
AFP-202ENST00000395792 PCBP1Q15365 356 aaKnown RBP eCLIP6.65□□□□□ -1.342e-22■■■■□ 19.6
AFP-202ENST00000395792 RBM5P52756 815 aaKnown RBP eCLIP7□□□□□ -1.292e-22■■□□□ 11.4
AFP-202ENST00000395792 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.58□□□□□ -1.362e-18■■■■□ 20.5
AFP-202ENST00000395792 EIF3HO15372 352 aaKnown RBP eCLIP6.38□□□□□ -1.392e-18■□□□□ 10.7
AFP-202ENST00000395792 AQRO60306 1485 aaKnown RBP eCLIP9.46□□□□□ -0.94e-18■■■■■ 34.5
AFP-202ENST00000395792 KHSRPQ92945 711 aaKnown RBP eCLIP6.38□□□□□ -1.399e-17■■□□□ 12
AFP-202ENST00000395792 U2AF2P26368 475 aaKnown RBP eCLIP7.08□□□□□ -1.284e-16■■■□□ 17
AFP-202ENST00000395792 HNRNPCP07910 306 aaKnown RBP eCLIP6.73□□□□□ -1.331e-11■□□□□ 10
AFP-202ENST00000395792 U2AF1Q01081 240 aaKnown RBP eCLIP7.99□□□□□ -1.132e-11■■□□□ 13.6
AFP-202ENST00000395792 RBFOX2O43251 390 aaKnown RBP eCLIP5.09□□□□□ -1.592e-11■■■■■ 39.6
AFP-202ENST00000395792 HNRNPLP14866 589 aaKnown RBP eCLIP6.05□□□□□ -1.449e-11■■□□□ 13.2
AFP-202ENST00000395792 CSTF2P33240 577 aaKnown RBP eCLIP6.08□□□□□ -1.441e-9■■■■■ 42
AFP-202ENST00000395792 TIAL1Q01085 375 aaKnown RBP eCLIP6.06□□□□□ -1.443e-9■■■■□ 19.6
AFP-202ENST00000395792 HNRNPUQ00839 825 aaKnown RBP eCLIP8.21□□□□□ -1.11e-7■□□□□ 8.1
AFP-202ENST00000395792 TIA1P31483 386 aaKnown RBP eCLIP5.88□□□□□ -1.472e-7■■■■■ 57.8
AFP-202ENST00000395792 IGF2BP3O00425 579 aaKnown RBP eCLIP6.58□□□□□ -1.363e-7■■■□□ 16.3
AFP-202ENST00000395792 HNRNPKP61978 463 aaKnown RBP eCLIP5.82□□□□□ -1.488e-7■□□□□ 9.9
AFP-202ENST00000395792 TRA2AQ13595 282 aaKnown RBP eCLIP5.88□□□□□ -1.479e-7■■■□□ 16.7
AFP-202ENST00000395792 SF3B4Q15427 424 aaKnown RBP eCLIP5.74□□□□□ -1.499e-7■■■■■ 34.5
AFP-202ENST00000395792 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.3□□□□□ -1.082e-6■■■■□ 23.4
AFP-202ENST00000395792 HNRNPA1P09651 372 aaKnown RBP eCLIP6.21□□□□□ -1.414e-6■□□□□ 10.3
Retrieved 48 of 48 RNA–protein pairs in 9.8 ms