RNA–Protein interactions for RNA: ENST00000395792.6

AFP-202, Transcript of alpha fetoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFP, Length 2,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-202ENST00000395792 NISCHQ9Y2I1 1504 aa13.73□□□□□ -0.21
AFP-202ENST00000395792 CCDC180Q9P1Z9 1646 aa12.06□□□□□ -0.48
AFP-202ENST00000395792 SLC24A1O60721 1099 aa11.75□□□□□ -0.53
AFP-202ENST00000395792 CHIC1Q5VXU3 224 aa11.75□□□□□ -0.53
AFP-202ENST00000395792 AEBP2Q6ZN18 517 aaPredicted RBP11.6□□□□□ -0.55
AFP-202ENST00000395792 ZCCHC6Q5VYS8 1495 aaKnown RBP11.55□□□□□ -0.56
AFP-202ENST00000395792 DCAF1Q9Y4B6 1507 aa11.48□□□□□ -0.57
AFP-202ENST00000395792 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
AFP-202ENST00000395792 NACADO15069 1562 aa11.19□□□□□ -0.62
AFP-202ENST00000395792 ABCC9O60706 1549 aa11.09□□□□□ -0.63
AFP-202ENST00000395792 DCAF8L2P0C7V8 631 aa11.08□□□□□ -0.64
AFP-202ENST00000395792 RB1CC1Q8TDY2 1594 aa11.05□□□□□ -0.64
AFP-202ENST00000395792 SHROOM4Q9ULL8 1493 aa10.98□□□□□ -0.65
AFP-202ENST00000395792 SCRIBQ14160 1630 aa10.89□□□□□ -0.67
AFP-202ENST00000395792 EHMT2Q96KQ7 1210 aa10.8□□□□□ -0.68
AFP-202ENST00000395792 UNC13AQ9UPW8 1703 aa10.76□□□□□ -0.69
AFP-202ENST00000395792 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
AFP-202ENST00000395792 SUPT5HO00267 1087 aaKnown RBP10.63□□□□□ -0.71
AFP-202ENST00000395792 BAZ1AQ9NRL2 1556 aaPredicted RBP10.63□□□□□ -0.71
AFP-202ENST00000395792 BICRAQ9NZM4 1560 aa10.63□□□□□ -0.71
AFP-202ENST00000395792 RSF1Q96T23 1441 aaPredicted RBP10.62□□□□□ -0.71
AFP-202ENST00000395792 PHF23Q9BUL5 403 aaPredicted RBP10.6□□□□□ -0.71
AFP-202ENST00000395792 SMARCA4P51532 1647 aa10.54□□□□□ -0.72
AFP-202ENST00000395792 CECR2Q9BXF3 1484 aa10.54□□□□□ -0.72
AFP-202ENST00000395792 MROH2BQ7Z745 1585 aa10.53□□□□□ -0.72
AFP-202ENST00000395792 PLPPR3Q6T4P5 718 aa10.51□□□□□ -0.73
AFP-202ENST00000395792 NCBP3Q53F19 620 aaKnown RBP10.51□□□□□ -0.73
AFP-202ENST00000395792 RTN4Q9NQC3 1192 aaKnown RBP10.49□□□□□ -0.73
AFP-202ENST00000395792 PEG3Q9GZU2 1588 aa10.49□□□□□ -0.73
AFP-202ENST00000395792 TTBK1Q5TCY1 1321 aaPredicted RBP10.45□□□□□ -0.74
AFP-202ENST00000395792 WIZO95785 1651 aa10.45□□□□□ -0.74
AFP-202ENST00000395792 TOP2AP11388 1531 aaKnown RBP10.44□□□□□ -0.74
AFP-202ENST00000395792 MYT1Q01538 1121 aa10.42□□□□□ -0.74
AFP-202ENST00000395792 PABPN1Q86U42 306 aaKnown RBP eCLIP10.41□□□□□ -0.74
AFP-202ENST00000395792 SMARCA2P51531 1590 aa10.4□□□□□ -0.74
AFP-202ENST00000395792 ATAD2BQ9ULI0 1458 aa10.33□□□□□ -0.76
AFP-202ENST00000395792 AMER1Q5JTC6 1135 aaPredicted RBP10.32□□□□□ -0.76
AFP-202ENST00000395792 EIF4G1Q04637 1599 aaKnown RBP10.31□□□□□ -0.76
AFP-202ENST00000395792 HMGXB3Q12766 1538 aa10.3□□□□□ -0.76
AFP-202ENST00000395792 PELP1Q8IZL8 1130 aaKnown RBP10.3□□□□□ -0.76
AFP-202ENST00000395792 NCAPD3P42695 1498 aa10.28□□□□□ -0.76
AFP-202ENST00000395792 BAZ1BQ9UIG0 1483 aaKnown RBP10.27□□□□□ -0.77
AFP-202ENST00000395792 CCDC88BA6NC98 1476 aa10.26□□□□□ -0.77
AFP-202ENST00000395792 APLP2Q06481 763 aa10.23□□□□□ -0.77
AFP-202ENST00000395792 ERICH6Q7L0X2 663 aa10.17□□□□□ -0.78
AFP-202ENST00000395792 PRKCSHP14314 528 aaPredicted RBP10.13□□□□□ -0.79
AFP-202ENST00000395792 CC2D2AQ9P2K1 1620 aa10.13□□□□□ -0.79
AFP-202ENST00000395792 ARXQ96QS3 562 aa10.12□□□□□ -0.79
AFP-202ENST00000395792 KCNA4P22459 653 aa10.1□□□□□ -0.79
AFP-202ENST00000395792 TRIM41Q8WV44 630 aa10.1□□□□□ -0.79
AFP-202ENST00000395792 PRDM2Q13029 1718 aa10.09□□□□□ -0.79
AFP-202ENST00000395792 CFTRP13569 1480 aa10.05□□□□□ -0.8
AFP-202ENST00000395792 CSRNP3Q8WYN3 585 aa10.04□□□□□ -0.8
AFP-202ENST00000395792 EEA1Q15075 1411 aa10.03□□□□□ -0.8
AFP-202ENST00000395792 WRNQ14191 1432 aaPredicted RBP eCLIP10.01□□□□□ -0.81
AFP-202ENST00000395792 BIVM-ERCC5R4GMW8 1640 aa9.99□□□□□ -0.81
AFP-202ENST00000395792 ABCC8Q09428 1581 aa9.98□□□□□ -0.81
AFP-202ENST00000395792 CADPSQ9ULU8 1353 aa9.98□□□□□ -0.81
AFP-202ENST00000395792 TOP2BQ02880 1626 aa9.97□□□□□ -0.81
AFP-202ENST00000395792 LAMC3Q9Y6N6 1575 aa9.95□□□□□ -0.82
AFP-202ENST00000395792 SYNJ1O43426 1573 aa9.93□□□□□ -0.82
AFP-202ENST00000395792 TIMELESSQ9UNS1 1208 aa9.92□□□□□ -0.82
AFP-202ENST00000395792 RANGAP1P46060 587 aaPredicted RBP9.88□□□□□ -0.83
AFP-202ENST00000395792 CUX1P39880 1505 aa9.86□□□□□ -0.83
AFP-202ENST00000395792 FANCD2Q9BXW9 1451 aa9.85□□□□□ -0.83
AFP-202ENST00000395792 KIF21BO75037 1637 aa9.84□□□□□ -0.83
AFP-202ENST00000395792 PDS5BQ9NTI5 1447 aa9.84□□□□□ -0.83
AFP-202ENST00000395792 DNMBPQ6XZF7 1577 aa9.83□□□□□ -0.84
AFP-202ENST00000395792 SOGA1O94964 1423 aa9.82□□□□□ -0.84
AFP-202ENST00000395792 CEP164Q9UPV0 1460 aa9.81□□□□□ -0.84
AFP-202ENST00000395792 LOC105371045A0A1W2PR82 267 aa9.8□□□□□ -0.84
AFP-202ENST00000395792 GOLGA3Q08378 1498 aa9.8□□□□□ -0.84
AFP-202ENST00000395792 TAOK2Q9UL54 1235 aa9.8□□□□□ -0.84
AFP-202ENST00000395792 HOMEZQ8IX15 550 aa9.79□□□□□ -0.84
AFP-202ENST00000395792 TNIKQ9UKE5 1360 aa9.79□□□□□ -0.84
AFP-202ENST00000395792 TULP1O00294 542 aaPredicted RBP9.79□□□□□ -0.84
AFP-202ENST00000395792 ERICH3Q5RHP9 1530 aa9.79□□□□□ -0.84
AFP-202ENST00000395792 KIF27Q86VH2 1401 aa9.79□□□□□ -0.84
AFP-202ENST00000395792 FAM9AQ8IZU1 332 aaPredicted RBP9.77□□□□□ -0.85
AFP-202ENST00000395792 TOPBP1Q92547 1522 aa9.75□□□□□ -0.85
AFP-202ENST00000395792 RUSC2Q8N2Y8 1516 aa9.75□□□□□ -0.85
AFP-202ENST00000395792 NESP48681 1621 aa9.74□□□□□ -0.85
AFP-202ENST00000395792 FGD5Q6ZNL6 1462 aa9.74□□□□□ -0.85
AFP-202ENST00000395792 PRXQ9BXM0 1461 aa9.73□□□□□ -0.85
AFP-202ENST00000395792 ABCA10Q8WWZ4 1543 aa9.73□□□□□ -0.85
AFP-202ENST00000395792 KIF21AQ7Z4S6 1674 aa9.72□□□□□ -0.85
AFP-202ENST00000395792 WDR97A6NE52 1622 aa9.71□□□□□ -0.85
AFP-202ENST00000395792 BCANQ96GW7 911 aa9.7□□□□□ -0.86
AFP-202ENST00000395792 URB2Q14146 1524 aaKnown RBP9.7□□□□□ -0.86
AFP-202ENST00000395792 POLA1P09884 1462 aaPredicted RBP9.69□□□□□ -0.86
AFP-202ENST00000395792 MRC2Q9UBG0 1479 aa9.69□□□□□ -0.86
AFP-202ENST00000395792 POTEDQ86YR6 584 aa9.68□□□□□ -0.86
AFP-202ENST00000395792 CUL7Q14999 1698 aa9.68□□□□□ -0.86
AFP-202ENST00000395792 CUX2O14529 1486 aa9.68□□□□□ -0.86
AFP-202ENST00000395792 CEP162Q5TB80 1403 aa9.67□□□□□ -0.86
AFP-202ENST00000395792 WDR62O43379 1518 aa9.65□□□□□ -0.86
AFP-202ENST00000395792 IGF1RP08069 1367 aa9.64□□□□□ -0.87
AFP-202ENST00000395792 RAPGEF2Q9Y4G8 1499 aa9.64□□□□□ -0.87
AFP-202ENST00000395792 UBTFP17480 764 aaKnown RBP9.64□□□□□ -0.87
AFP-202ENST00000395792 ABCA5Q8WWZ7 1642 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms