RNA–Protein interactions for RNA: YDR064W

RPS13, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS13, Length 456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS13	YDR064W	SKI3	P17883	1432 aa	Known RBP	4.84	□□□□□ -1.63
RPS13	YDR064W	YMR196W	Q04336	1088 aa		4.84	□□□□□ -1.63
RPS13	YDR064W	FPR4	Q06205	392 aa	Predicted RBP	4.84	□□□□□ -1.63
RPS13	YDR064W	GIN4	Q12263	1142 aa		4.84	□□□□□ -1.63
RPS13	YDR064W	PEP1	P32319	1579 aa		4.83	□□□□□ -1.64
RPS13	YDR064W	SPT7	P35177	1332 aa		4.82	□□□□□ -1.64
RPS13	YDR064W	CDC4	P07834	779 aa		4.82	□□□□□ -1.64
RPS13	YDR064W	ASF1	P32447	279 aa		4.82	□□□□□ -1.64
RPS13	YDR064W	VPS72	Q03388	795 aa		4.82	□□□□□ -1.64
RPS13	YDR064W	MET32	Q12041	191 aa		4.82	□□□□□ -1.64
RPS13	YDR064W	TAF2	P23255	1407 aa		4.81	□□□□□ -1.64
RPS13	YDR064W	PDC1	P06169	563 aa	Known RBP	4.81	□□□□□ -1.64
RPS13	YDR064W	BRL1	P38770	471 aa		4.81	□□□□□ -1.64
RPS13	YDR064W	BRE2	P43132	505 aa		4.81	□□□□□ -1.64
RPS13	YDR064W	ATF2	P53296	535 aa		4.81	□□□□□ -1.64
RPS13	YDR064W	HED1	Q03937	162 aa		4.81	□□□□□ -1.64
RPS13	YDR064W	TYW1	Q08960	810 aa	Known RBP	4.81	□□□□□ -1.64
RPS13	YDR064W	YTA7	P40340	1379 aa		4.8	□□□□□ -1.64
RPS13	YDR064W	BNI1	P41832	1953 aa		4.8	□□□□□ -1.64
RPS13	YDR064W	HIR3	P47171	1648 aa		4.8	□□□□□ -1.64
RPS13	YDR064W	ESS1	P22696	170 aa		4.8	□□□□□ -1.64
RPS13	YDR064W	YGR130C	P53278	816 aa		4.8	□□□□□ -1.64
RPS13	YDR064W	YNR021W	P53723	404 aa	Known RBP	4.8	□□□□□ -1.64
RPS13	YDR064W	YCF1	P39109	1515 aa	Known RBP	4.79	□□□□□ -1.64
RPS13	YDR064W	LEU3	P08638	886 aa		4.79	□□□□□ -1.64
RPS13	YDR064W	TRM1	P15565	570 aa	Known RBP	4.79	□□□□□ -1.64
RPS13	YDR064W	YJU3	P28321	313 aa		4.79	□□□□□ -1.64
RPS13	YDR064W	PIL1	P53252	339 aa	Known RBP	4.79	□□□□□ -1.64
RPS13	YDR064W	HST2	P53686	357 aa		4.79	□□□□□ -1.64
RPS13	YDR064W	YDL206W	Q12424	762 aa		4.79	□□□□□ -1.64
RPS13	YDR064W	KTR1	P27810	393 aa	Known RBP	4.78	□□□□□ -1.64
RPS13	YDR064W	SWE1	P32944	819 aa		4.78	□□□□□ -1.64
RPS13	YDR064W	RRD1	P40454	393 aa	Known RBP	4.78	□□□□□ -1.64
RPS13	YDR064W	HXT10	P43581	546 aa		4.78	□□□□□ -1.64
RPS13	YDR064W	ITT1	Q04638	464 aa		4.78	□□□□□ -1.64
RPS13	YDR064W	MMP1	Q12372	583 aa		4.78	□□□□□ -1.64
RPS13	YDR064W	NMD2	P38798	1089 aa	Known RBP	4.77	□□□□□ -1.65
RPS13	YDR064W	KXD1	P53158	218 aa		4.77	□□□□□ -1.65
RPS13	YDR064W	TLG1	Q03322	224 aa		4.77	□□□□□ -1.65
RPS13	YDR064W	MYO2	P19524	1574 aa	Known RBP	4.76	□□□□□ -1.65
RPS13	YDR064W	ASH1	P34233	588 aa		4.76	□□□□□ -1.65
RPS13	YDR064W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
RPS13	YDR064W	PUS6	P53294	404 aa		4.76	□□□□□ -1.65
RPS13	YDR064W	YNL011C	P53980	444 aa		4.76	□□□□□ -1.65
RPS13	YDR064W	TPD3	P31383	635 aa		4.75	□□□□□ -1.65
RPS13	YDR064W	GLN1	P32288	370 aa	Known RBP	4.75	□□□□□ -1.65
RPS13	YDR064W	MPP10	P47083	593 aa	Known RBP	4.75	□□□□□ -1.65
RPS13	YDR064W	TBF1	Q02457	562 aa		4.75	□□□□□ -1.65
RPS13	YDR064W	NHA1	Q99271	985 aa		4.75	□□□□□ -1.65
RPS13	YDR064W	LTE1	P07866	1435 aa		4.74	□□□□□ -1.65
RPS13	YDR064W	HSC82	P15108	705 aa	Known RBP	4.74	□□□□□ -1.65
RPS13	YDR064W	SPC110	P32380	944 aa		4.74	□□□□□ -1.65
RPS13	YDR064W	RPA14	P50106	137 aa		4.74	□□□□□ -1.65
RPS13	YDR064W	SSA1	P10591	642 aa	Known RBP	4.73	□□□□□ -1.65
RPS13	YDR064W	SSA2	P10592	639 aa	Known RBP	4.73	□□□□□ -1.65
RPS13	YDR064W	GAR1	P28007	205 aa	Known RBP	4.73	□□□□□ -1.65
RPS13	YDR064W	RGA1	P39083	1007 aa		4.73	□□□□□ -1.65
RPS13	YDR064W	YSH1	Q06224	779 aa	Predicted RBP	4.73	□□□□□ -1.65
RPS13	YDR064W	YPR097W	Q06839	1073 aa		4.73	□□□□□ -1.65
RPS13	YDR064W	CDC25	P04821	1589 aa		4.73	□□□□□ -1.65
RPS13	YDR064W	MMS1	Q06211	1407 aa		4.72	□□□□□ -1.65
RPS13	YDR064W	AFT1	P22149	690 aa		4.72	□□□□□ -1.65
RPS13	YDR064W	BRN1	P38170	754 aa		4.72	□□□□□ -1.65
RPS13	YDR064W	GCR2	Q01722	534 aa		4.72	□□□□□ -1.65
RPS13	YDR064W	PKH3	Q03306	898 aa	Predicted RBP	4.72	□□□□□ -1.65
RPS13	YDR064W	ALR1	Q08269	859 aa		4.72	□□□□□ -1.65
RPS13	YDR064W	IRC20	Q06554	1556 aa		4.72	□□□□□ -1.65
RPS13	YDR064W	RPA190	P10964	1664 aa	Known RBP	4.72	□□□□□ -1.65
RPS13	YDR064W	SEC3	P33332	1336 aa	Known RBP	4.72	□□□□□ -1.65
RPS13	YDR064W	PET111	P08468	800 aa		4.71	□□□□□ -1.66
RPS13	YDR064W	MET22	P32179	357 aa		4.71	□□□□□ -1.66
RPS13	YDR064W	RSC30	P38781	883 aa		4.71	□□□□□ -1.66
RPS13	YDR064W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
RPS13	YDR064W	NNF2	P53253	936 aa		4.71	□□□□□ -1.66
RPS13	YDR064W	HST3	P53687	447 aa		4.71	□□□□□ -1.66
RPS13	YDR064W	SYH1	Q02875	849 aa	Known RBP	4.71	□□□□□ -1.66
RPS13	YDR064W	AIM7	Q12156	149 aa		4.71	□□□□□ -1.66
RPS13	YDR064W	DNF1	P32660	1571 aa		4.7	□□□□□ -1.66
RPS13	YDR064W	CDC11	P32458	415 aa		4.7	□□□□□ -1.66
RPS13	YDR064W	OSW7	P43611	510 aa		4.7	□□□□□ -1.66
RPS13	YDR064W	YJR115W	P47152	169 aa		4.7	□□□□□ -1.66
RPS13	YDR064W	ATG2	P53855	1592 aa		4.7	□□□□□ -1.66
RPS13	YDR064W	CLC1	P17891	233 aa		4.69	□□□□□ -1.66
RPS13	YDR064W	KIP2	P28743	706 aa		4.69	□□□□□ -1.66
RPS13	YDR064W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
RPS13	YDR064W	CSN12	P47130	423 aa		4.69	□□□□□ -1.66
RPS13	YDR064W	VPS4	P52917	437 aa		4.69	□□□□□ -1.66
RPS13	YDR064W	IXR1	P33417	597 aa		4.68	□□□□□ -1.66
RPS13	YDR064W	MSH4	P40965	878 aa	Predicted RBP	4.68	□□□□□ -1.66
RPS13	YDR064W	GRX3	Q03835	250 aa		4.68	□□□□□ -1.66
RPS13	YDR064W	MET5	P47169	1442 aa		4.67	□□□□□ -1.66
RPS13	YDR064W	ARG8	P18544	423 aa		4.67	□□□□□ -1.66
RPS13	YDR064W	SGS1	P35187	1447 aa		4.66	□□□□□ -1.66
RPS13	YDR064W	KIN1	P13185	1064 aa		4.66	□□□□□ -1.66
RPS13	YDR064W	HOS4	P40480	1083 aa		4.66	□□□□□ -1.66
RPS13	YDR064W	TAN1	P53072	289 aa	Predicted RBP	4.66	□□□□□ -1.66
RPS13	YDR064W	RTS3	P53289	263 aa		4.66	□□□□□ -1.66
RPS13	YDR064W	YPL062W	Q02781	134 aa		4.66	□□□□□ -1.66
RPS13	YDR064W	YDR444W	Q04093	687 aa		4.66	□□□□□ -1.66
RPS13	YDR064W	ENV9	Q08651	330 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms