Protein–RNA interactions for Protein: P47171

HIR3, Histone transcription regulator 3, yeastyeast

Predictions only

Length 1,648 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HIR3P47171 YML009W-BYML009W-B 477 nt36.46■■■■□ 3.43
HIR3P47171 NOP1YDL014W 984 nt35.24■■■■□ 3.23
HIR3P47171 NSR1YGR159C 1245 nt34.84■■■■□ 3.17
HIR3P47171 YKL036CYKL036C 393 nt33.68■■■□□ 2.98
HIR3P47171 YJL027CYJL027C 417 nt31.65■■■□□ 2.66
HIR3P47171 SCS3YGL126W 1143 nt31.38■■■□□ 2.61
HIR3P47171 Q0297Q0297 156 nt31.31■■■□□ 2.6
HIR3P47171 SRX1YKL086W 384 nt31.06■■■□□ 2.56
HIR3P47171 MDJ1YFL016C 1536 nt30.69■■■□□ 2.5
HIR3P47171 YCR051WYCR051W 669 nt29.67■■■□□ 2.34
HIR3P47171 YOL085CYOL085C 342 nt29.08■■■□□ 2.25
HIR3P47171 PKP1YIL042C 1185 nt28.89■■■□□ 2.22
HIR3P47171 SCJ1YMR214W 1134 nt28.46■■■□□ 2.15
HIR3P47171 RPP1BYDL130W 321 nt28.12■■■□□ 2.09
HIR3P47171 ATS1YAL020C 1002 nt28.06■■■□□ 2.08
HIR3P47171 TRN1tP(UGG)A 72 nt27.67■■■□□ 2.02
HIR3P47171 SUF9tP(UGG)F 72 nt27.67■■■□□ 2.02
HIR3P47171 SUF8tP(UGG)H 72 nt27.67■■■□□ 2.02
HIR3P47171 tP(UGG)LtP(UGG)L 72 nt27.67■■■□□ 2.02
HIR3P47171 SUF7tP(UGG)M 72 nt27.67■■■□□ 2.02
HIR3P47171 tP(UGG)N1tP(UGG)N1 72 nt27.67■■■□□ 2.02
HIR3P47171 tP(UGG)N2tP(UGG)N2 72 nt27.67■■■□□ 2.02
HIR3P47171 tP(UGG)O1tP(UGG)O1 72 nt27.67■■■□□ 2.02
HIR3P47171 SUF11tP(UGG)O2 72 nt27.67■■■□□ 2.02
HIR3P47171 CCC1YLR220W 969 nt27.42■■□□□ 1.98
HIR3P47171 DBP2YNL112W 1641 nt27.38■■□□□ 1.97
HIR3P47171 PET122YER153C 765 nt27.05■■□□□ 1.92
HIR3P47171 SCR1SCR1 522 nt26.72■■□□□ 1.87
HIR3P47171 tP(UGG)O3tP(UGG)O3 72 nt26.4■■□□□ 1.82
HIR3P47171 RTC3YHR087W 336 nt26.28■■□□□ 1.8
HIR3P47171 RRN5YLR141W 1092 nt26.14■■□□□ 1.78
HIR3P47171 RSB1YOR049C 1065 nt26.06■■□□□ 1.76
HIR3P47171 PST2YDR032C 597 nt25.77■■□□□ 1.72
HIR3P47171 RVS167YDR388W 1449 nt25.71■■□□□ 1.71
HIR3P47171 YER088W-BYER088W-B 147 nt25.68■■□□□ 1.7
HIR3P47171 YBR190WYBR190W 312 nt25.44■■□□□ 1.66
HIR3P47171 YKL097CYKL097C 411 nt25.42■■□□□ 1.66
HIR3P47171 YDJ1YNL064C 1230 nt25.32■■□□□ 1.64
HIR3P47171 SHR5YOL110W 714 nt25.12■■□□□ 1.61
HIR3P47171 GAR1YHR089C 618 nt24.87■■□□□ 1.57
HIR3P47171 SHU1YHL006C 453 nt24.76■■□□□ 1.55
HIR3P47171 DEP1YAL013W 1218 nt24.4■■□□□ 1.5
HIR3P47171 YOR139CYOR139C 393 nt24.37■■□□□ 1.49
HIR3P47171 YAL037C-BYAL037C-B 975 nt24.24■■□□□ 1.47
HIR3P47171 URN1YPR152C 1398 nt23.98■■□□□ 1.43
HIR3P47171 TIR1YER011W 765 nt23.92■■□□□ 1.42
HIR3P47171 NPL3YDR432W 1245 nt23.82■■□□□ 1.4
HIR3P47171 YNL208WYNL208W 600 nt23.72■■□□□ 1.39
HIR3P47171 SRB2YHR041C 633 nt23.66■■□□□ 1.38
HIR3P47171 MNP1YGL068W 585 nt23.62■■□□□ 1.37
HIR3P47171 RPN10YHR200W 807 nt23.56■■□□□ 1.36
HIR3P47171 SSA1YAL005C 1929 nt23.54■■□□□ 1.36
HIR3P47171 OPI9YLR338W 858 nt23.23■■□□□ 1.31
HIR3P47171 HOM6YJR139C 1080 nt23.22■■□□□ 1.31
HIR3P47171 WWM1YFL010C 636 nt23.22■■□□□ 1.31
HIR3P47171 YOL037CYOL037C 354 nt23.2■■□□□ 1.3
HIR3P47171 YGR021WYGR021W 873 nt23.11■■□□□ 1.29
HIR3P47171 tM(CAU)CtM(CAU)C 72 nt23.08■■□□□ 1.29
HIR3P47171 IMT4tM(CAU)E 72 nt23.08■■□□□ 1.29
HIR3P47171 IMT3tM(CAU)J3 72 nt23.08■■□□□ 1.29
HIR3P47171 IMT1tM(CAU)O1 72 nt23.08■■□□□ 1.29
HIR3P47171 IMT2tM(CAU)P 72 nt23.08■■□□□ 1.29
HIR3P47171 SAH1YER043C 1350 nt23.06■■□□□ 1.28
HIR3P47171 YJR120WYJR120W 351 nt22.99■■□□□ 1.27
HIR3P47171 RKM5YLR137W 1104 nt22.86■■□□□ 1.25
HIR3P47171 YJR018WYJR018W 363 nt22.8■■□□□ 1.24
HIR3P47171 MOT3YMR070W 1473 nt22.77■■□□□ 1.24
HIR3P47171 PUS2YGL063W 1113 nt22.7■■□□□ 1.22
HIR3P47171 YFL021C-AYFL021C-A 855 nt22.59■■□□□ 1.21
HIR3P47171 SSA3YBL075C 1950 nt22.55■■□□□ 1.2
HIR3P47171 PUT4YOR348C 1884 nt22.54■■□□□ 1.2
HIR3P47171 ARE1YCR048W 1833 nt22.52■■□□□ 1.2
HIR3P47171 YLR281CYLR281C 468 nt22.51■■□□□ 1.19
HIR3P47171 PUN1YLR414C 792 nt22.51■■□□□ 1.19
HIR3P47171 RPP2BYDR382W 333 nt22.48■■□□□ 1.19
HIR3P47171 BSC6YOL137W 1494 nt22.47■■□□□ 1.19
HIR3P47171 YHR049C-AYHR049C-A 297 nt22.43■■□□□ 1.18
HIR3P47171 WHI5YOR083W 888 nt22.37■■□□□ 1.17
HIR3P47171 BDH2YAL061W 1254 nt22.29■■□□□ 1.16
HIR3P47171 FMP45YDL222C 930 nt22.28■■□□□ 1.16
HIR3P47171 YLR236CYLR236C 324 nt22.28■■□□□ 1.16
HIR3P47171 YPR011CYPR011C 981 nt22.19■■□□□ 1.14
HIR3P47171 PTC2YER089C 1395 nt22.18■■□□□ 1.14
HIR3P47171 DSK2YMR276W 1122 nt22.03■■□□□ 1.12
HIR3P47171 POA1YBR022W 534 nt21.98■■□□□ 1.11
HIR3P47171 YBL100CYBL100C 315 nt21.91■■□□□ 1.1
HIR3P47171 BUD23YCR047C 828 nt21.91■■□□□ 1.1
HIR3P47171 LSM3YLR438C-A 270 nt21.88■■□□□ 1.09
HIR3P47171 YCH1YGR203W 447 nt21.88■■□□□ 1.09
HIR3P47171 MRPL8YJL063C 717 nt21.87■■□□□ 1.09
HIR3P47171 FIS1YIL065C 468 nt21.85■■□□□ 1.09
HIR3P47171 UBX6YJL048C 1191 nt21.84■■□□□ 1.09
HIR3P47171 LPX1YOR084W 1164 nt21.78■■□□□ 1.08
HIR3P47171 FPR4YLR449W 1179 nt21.77■■□□□ 1.07
HIR3P47171 SPP1YPL138C 1062 nt21.75■■□□□ 1.07
HIR3P47171 YLR154C-GYLR154C-G 150 nt21.74■■□□□ 1.07
HIR3P47171 NAB2YGL122C 1578 nt21.67■■□□□ 1.06
HIR3P47171 YEL076C-AYEL076C-A 651 nt21.65■■□□□ 1.06
HIR3P47171 YEL076CYEL076C 651 nt21.65■■□□□ 1.06
HIR3P47171 PHO4YFR034C 939 nt21.65■■□□□ 1.06
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms