Protein–RNA interactions for Protein: P35187

SGS1, ATP-dependent helicase SGS1, yeastyeast

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGS1P35187 YML009W-BYML009W-B 477 nt38.75■■■■□ 3.79
SGS1P35187 NOP1YDL014W 984 nt37.57■■■■□ 3.6
SGS1P35187 NSR1YGR159C 1245 nt37.47■■■■□ 3.59
SGS1P35187 YKL036CYKL036C 393 nt35.52■■■■□ 3.28
SGS1P35187 YJL027CYJL027C 417 nt33.37■■■□□ 2.93
SGS1P35187 Q0297Q0297 156 nt33.19■■■□□ 2.9
SGS1P35187 MDJ1YFL016C 1536 nt33.06■■■□□ 2.88
SGS1P35187 SRX1YKL086W 384 nt32.95■■■□□ 2.87
SGS1P35187 SCS3YGL126W 1143 nt32.86■■■□□ 2.85
SGS1P35187 YCR051WYCR051W 669 nt31.51■■■□□ 2.64
SGS1P35187 YOL085CYOL085C 342 nt30.76■■■□□ 2.51
SGS1P35187 PKP1YIL042C 1185 nt30.5■■■□□ 2.47
SGS1P35187 RPP1BYDL130W 321 nt29.84■■■□□ 2.37
SGS1P35187 SCJ1YMR214W 1134 nt29.59■■■□□ 2.33
SGS1P35187 TRN1tP(UGG)A 72 nt29.46■■■□□ 2.31
SGS1P35187 SUF9tP(UGG)F 72 nt29.46■■■□□ 2.31
SGS1P35187 SUF8tP(UGG)H 72 nt29.46■■■□□ 2.31
SGS1P35187 tP(UGG)LtP(UGG)L 72 nt29.46■■■□□ 2.31
SGS1P35187 SUF7tP(UGG)M 72 nt29.46■■■□□ 2.31
SGS1P35187 tP(UGG)N1tP(UGG)N1 72 nt29.46■■■□□ 2.31
SGS1P35187 tP(UGG)N2tP(UGG)N2 72 nt29.46■■■□□ 2.31
SGS1P35187 tP(UGG)O1tP(UGG)O1 72 nt29.46■■■□□ 2.31
SGS1P35187 SUF11tP(UGG)O2 72 nt29.46■■■□□ 2.31
SGS1P35187 ATS1YAL020C 1002 nt29.45■■■□□ 2.31
SGS1P35187 DBP2YNL112W 1641 nt29.41■■■□□ 2.3
SGS1P35187 CCC1YLR220W 969 nt29.34■■■□□ 2.29
SGS1P35187 PET122YER153C 765 nt28.63■■■□□ 2.17
SGS1P35187 SCR1SCR1 522 nt28.29■■■□□ 2.12
SGS1P35187 tP(UGG)O3tP(UGG)O3 72 nt28.1■■■□□ 2.09
SGS1P35187 RRN5YLR141W 1092 nt27.78■■■□□ 2.04
SGS1P35187 YBR190WYBR190W 312 nt27.62■■■□□ 2.01
SGS1P35187 RVS167YDR388W 1449 nt27.62■■■□□ 2.01
SGS1P35187 RSB1YOR049C 1065 nt27.51■■□□□ 1.99
SGS1P35187 RTC3YHR087W 336 nt27.33■■□□□ 1.96
SGS1P35187 YER088W-BYER088W-B 147 nt27.24■■□□□ 1.95
SGS1P35187 PST2YDR032C 597 nt27.12■■□□□ 1.93
SGS1P35187 YDJ1YNL064C 1230 nt27■■□□□ 1.91
SGS1P35187 SHR5YOL110W 714 nt26.88■■□□□ 1.89
SGS1P35187 GAR1YHR089C 618 nt26.56■■□□□ 1.84
SGS1P35187 YKL097CYKL097C 411 nt26.52■■□□□ 1.84
SGS1P35187 DEP1YAL013W 1218 nt26.2■■□□□ 1.78
SGS1P35187 SHU1YHL006C 453 nt26.03■■□□□ 1.76
SGS1P35187 URN1YPR152C 1398 nt25.81■■□□□ 1.72
SGS1P35187 YAL037C-BYAL037C-B 975 nt25.57■■□□□ 1.68
SGS1P35187 TIR1YER011W 765 nt25.54■■□□□ 1.68
SGS1P35187 YNL208WYNL208W 600 nt25.52■■□□□ 1.68
SGS1P35187 YOR139CYOR139C 393 nt25.42■■□□□ 1.66
SGS1P35187 RPN10YHR200W 807 nt25.37■■□□□ 1.65
SGS1P35187 SSA1YAL005C 1929 nt25.17■■□□□ 1.62
SGS1P35187 SRB2YHR041C 633 nt25.14■■□□□ 1.62
SGS1P35187 OPI9YLR338W 858 nt25.12■■□□□ 1.61
SGS1P35187 SAH1YER043C 1350 nt24.98■■□□□ 1.59
SGS1P35187 NPL3YDR432W 1245 nt24.95■■□□□ 1.59
SGS1P35187 MNP1YGL068W 585 nt24.86■■□□□ 1.57
SGS1P35187 WWM1YFL010C 636 nt24.69■■□□□ 1.54
SGS1P35187 PUT4YOR348C 1884 nt24.64■■□□□ 1.54
SGS1P35187 YJR018WYJR018W 363 nt24.59■■□□□ 1.53
SGS1P35187 HOM6YJR139C 1080 nt24.59■■□□□ 1.53
SGS1P35187 YJR120WYJR120W 351 nt24.56■■□□□ 1.52
SGS1P35187 ARE1YCR048W 1833 nt24.49■■□□□ 1.51
SGS1P35187 YGR021WYGR021W 873 nt24.49■■□□□ 1.51
SGS1P35187 PUN1YLR414C 792 nt24.36■■□□□ 1.49
SGS1P35187 YOL037CYOL037C 354 nt24.36■■□□□ 1.49
SGS1P35187 YHR049C-AYHR049C-A 297 nt24.29■■□□□ 1.48
SGS1P35187 tM(CAU)CtM(CAU)C 72 nt24.26■■□□□ 1.47
SGS1P35187 IMT4tM(CAU)E 72 nt24.26■■□□□ 1.47
SGS1P35187 IMT3tM(CAU)J3 72 nt24.26■■□□□ 1.47
SGS1P35187 IMT1tM(CAU)O1 72 nt24.26■■□□□ 1.47
SGS1P35187 IMT2tM(CAU)P 72 nt24.26■■□□□ 1.47
SGS1P35187 RKM5YLR137W 1104 nt24.24■■□□□ 1.47
SGS1P35187 RPP2BYDR382W 333 nt24.19■■□□□ 1.46
SGS1P35187 PTC2YER089C 1395 nt24.09■■□□□ 1.45
SGS1P35187 YFL021C-AYFL021C-A 855 nt24.04■■□□□ 1.44
SGS1P35187 POA1YBR022W 534 nt24.04■■□□□ 1.44
SGS1P35187 SSA3YBL075C 1950 nt24.01■■□□□ 1.43
SGS1P35187 PUS2YGL063W 1113 nt23.91■■□□□ 1.42
SGS1P35187 BDH2YAL061W 1254 nt23.88■■□□□ 1.41
SGS1P35187 BUD23YCR047C 828 nt23.81■■□□□ 1.4
SGS1P35187 YLR281CYLR281C 468 nt23.77■■□□□ 1.4
SGS1P35187 MOT3YMR070W 1473 nt23.69■■□□□ 1.38
SGS1P35187 WHI5YOR083W 888 nt23.66■■□□□ 1.38
SGS1P35187 FPR4YLR449W 1179 nt23.6■■□□□ 1.37
SGS1P35187 YBL100CYBL100C 315 nt23.57■■□□□ 1.36
SGS1P35187 NAB2YGL122C 1578 nt23.53■■□□□ 1.36
SGS1P35187 LSM3YLR438C-A 270 nt23.52■■□□□ 1.36
SGS1P35187 FIS1YIL065C 468 nt23.51■■□□□ 1.35
SGS1P35187 DAL1YIR027C 1383 nt23.42■■□□□ 1.34
SGS1P35187 INM2YDR287W 879 nt23.41■■□□□ 1.34
SGS1P35187 YPR011CYPR011C 981 nt23.41■■□□□ 1.34
SGS1P35187 FMP45YDL222C 930 nt23.4■■□□□ 1.34
SGS1P35187 YLR236CYLR236C 324 nt23.39■■□□□ 1.33
SGS1P35187 BSC6YOL137W 1494 nt23.38■■□□□ 1.33
SGS1P35187 PHO4YFR034C 939 nt23.33■■□□□ 1.32
SGS1P35187 FUN26YAL022C 1554 nt23.27■■□□□ 1.32
SGS1P35187 TRM9YML014W 840 nt23.25■■□□□ 1.31
SGS1P35187 DSK2YMR276W 1122 nt23.23■■□□□ 1.31
SGS1P35187 YLR154C-GYLR154C-G 150 nt23.12■■□□□ 1.29
SGS1P35187 YCH1YGR203W 447 nt23.01■■□□□ 1.27
SGS1P35187 CCT6YDR188W 1641 nt22.98■■□□□ 1.27
SGS1P35187 LPX1YOR084W 1164 nt22.91■■□□□ 1.26
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms