RNA–Protein interactions for RNA: YDR064W

RPS13, Transcript of Protein component of the small (40S) ribosomal subunit, yeastyeast

Gene RPS13, Length 456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPS13YDR064W MTC1P47018 478 aaKnown RBP9.67□□□□□ -0.86
RPS13YDR064W DRS1P32892 752 aaKnown RBP9.07□□□□□ -0.96
RPS13YDR064W FAP1P53971 965 aa8.69□□□□□ -1.02
RPS13YDR064W PRY3P47033 881 aa8.19□□□□□ -1.1
RPS13YDR064W PRI1P10363 409 aa8.14□□□□□ -1.11
RPS13YDR064W AAD16Q02895 342 aa8.07□□□□□ -1.12
RPS13YDR064W ISW2Q08773 1120 aa7.96□□□□□ -1.14
RPS13YDR064W RPG1P38249 964 aaKnown RBP7.94□□□□□ -1.14
RPS13YDR064W DIP2Q12220 943 aaPredicted RBP7.93□□□□□ -1.14
RPS13YDR064W YCK3P39962 524 aa7.81□□□□□ -1.16
RPS13YDR064W TSR3Q12094 313 aaKnown RBP7.75□□□□□ -1.17
RPS13YDR064W AVT3P36062 692 aa7.67□□□□□ -1.18
RPS13YDR064W RSE1Q04693 1361 aaKnown RBP7.64□□□□□ -1.19
RPS13YDR064W HAA1Q12753 694 aaKnown RBP7.6□□□□□ -1.19
RPS13YDR064W BFR2Q06631 534 aaKnown RBP7.54□□□□□ -1.2
RPS13YDR064W RPL17AP05740 184 aaKnown RBP7.44□□□□□ -1.22
RPS13YDR064W RPL17BP46990 184 aaKnown RBP7.44□□□□□ -1.22
RPS13YDR064W REB1P21538 810 aa7.37□□□□□ -1.23
RPS13YDR064W MRPL32P25348 183 aa7.35□□□□□ -1.23
RPS13YDR064W SPT21P35209 758 aa7.13□□□□□ -1.27
RPS13YDR064W CDC27P38042 758 aa7.09□□□□□ -1.27
RPS13YDR064W YKR023WP36119 530 aaKnown RBP7.06□□□□□ -1.28
RPS13YDR064W YGL015CP33199 130 aa7.02□□□□□ -1.29
RPS13YDR064W DCD1P06773 312 aa6.94□□□□□ -1.3
RPS13YDR064W HOP09932 586 aa6.93□□□□□ -1.3
RPS13YDR064W TFC8Q12308 588 aa6.89□□□□□ -1.31
RPS13YDR064W RIM101P33400 625 aa6.85□□□□□ -1.31
RPS13YDR064W MAP2P38174 421 aaKnown RBP6.84□□□□□ -1.31
RPS13YDR064W UBP10P53874 792 aaPredicted RBP6.78□□□□□ -1.32
RPS13YDR064W SCY1P53009 804 aa6.7□□□□□ -1.34
RPS13YDR064W OXP1P28273 1286 aa6.67□□□□□ -1.34
RPS13YDR064W BCH2P36122 765 aa6.67□□□□□ -1.34
RPS13YDR064W TFA1P36100 482 aa6.62□□□□□ -1.35
RPS13YDR064W SLX5P32828 619 aaKnown RBP6.56□□□□□ -1.36
RPS13YDR064W RQC2Q12532 1038 aaKnown RBP6.54□□□□□ -1.36
RPS13YDR064W PTP3P40048 928 aa6.52□□□□□ -1.37
RPS13YDR064W EPS1P40557 701 aa6.5□□□□□ -1.37
RPS13YDR064W YIL055CP40523 627 aaKnown RBP6.49□□□□□ -1.37
RPS13YDR064W YAH1Q12184 172 aaKnown RBP6.48□□□□□ -1.37
RPS13YDR064W BDF1P35817 686 aa6.47□□□□□ -1.37
RPS13YDR064W TIF4632P39936 914 aaKnown RBP6.47□□□□□ -1.37
RPS13YDR064W BUD31P25337 157 aaPredicted RBP6.46□□□□□ -1.38
RPS13YDR064W TGL3P40308 642 aa6.45□□□□□ -1.38
RPS13YDR064W RSM7P47150 247 aa6.42□□□□□ -1.38
RPS13YDR064W AI2P03876 854 aa6.38□□□□□ -1.39
RPS13YDR064W YLR271WQ06152 274 aa6.36□□□□□ -1.39
RPS13YDR064W BBC1P47068 1157 aa6.32□□□□□ -1.4
RPS13YDR064W SSP1P38871 571 aa6.24□□□□□ -1.41
RPS13YDR064W PSD2P53037 1138 aaKnown RBP6.24□□□□□ -1.41
RPS13YDR064W UBP9P39967 754 aa6.21□□□□□ -1.42
RPS13YDR064W MST1P07236 462 aa6.19□□□□□ -1.42
RPS13YDR064W YOR238WQ08634 303 aa6.18□□□□□ -1.42
RPS13YDR064W MRM1P25270 412 aa6.17□□□□□ -1.42
RPS13YDR064W NSR1P27476 414 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
RPS13YDR064W CST9Q06032 482 aa6.16□□□□□ -1.42
RPS13YDR064W YBL029C-AQ3E756 94 aa6.16□□□□□ -1.42
RPS13YDR064W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
RPS13YDR064W SIS1P25294 352 aaKnown RBP6.14□□□□□ -1.43
RPS13YDR064W YAP5P40574 245 aa6.14□□□□□ -1.43
RPS13YDR064W INO80P53115 1489 aa6.14□□□□□ -1.43
RPS13YDR064W PIB1Q06651 286 aa6.12□□□□□ -1.43
RPS13YDR064W WSC3Q12215 556 aa6.08□□□□□ -1.44
RPS13YDR064W MON2P48563 1636 aaPredicted RBP6.07□□□□□ -1.44
RPS13YDR064W MGA2P40578 1113 aa6.07□□□□□ -1.44
RPS13YDR064W VNX1P42839 908 aa6.06□□□□□ -1.44
RPS13YDR064W RCR1P38212 213 aa6.03□□□□□ -1.44
RPS13YDR064W VPS29P38759 282 aa6.02□□□□□ -1.45
RPS13YDR064W TAF7Q05021 590 aa6.02□□□□□ -1.45
RPS13YDR064W GTT3P39996 337 aa6.01□□□□□ -1.45
RPS13YDR064W YFR006WP43590 535 aa6□□□□□ -1.45
RPS13YDR064W SPP1Q03012 353 aa5.99□□□□□ -1.45
RPS13YDR064W RTG3P38165 486 aa5.98□□□□□ -1.45
RPS13YDR064W STS1P38637 319 aa5.98□□□□□ -1.45
RPS13YDR064W DBP1P24784 617 aaKnown RBP5.97□□□□□ -1.45
RPS13YDR064W YMR1P47147 688 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
RPS13YDR064W TIF11P38912 153 aaKnown RBP5.94□□□□□ -1.46
RPS13YDR064W VMA1P17255 1071 aaKnown RBP5.89□□□□□ -1.47
RPS13YDR064W SET4P42948 560 aa5.89□□□□□ -1.47
RPS13YDR064W YOL036WQ08206 761 aa5.89□□□□□ -1.47
RPS13YDR064W ULI1P43604 169 aa5.88□□□□□ -1.47
RPS13YDR064W FKH1P40466 484 aa5.87□□□□□ -1.47
RPS13YDR064W IOC2Q12072 812 aa5.87□□□□□ -1.47
RPS13YDR064W AIR2Q12476 344 aaKnown RBP5.87□□□□□ -1.47
RPS13YDR064W LDB19Q12502 818 aa5.87□□□□□ -1.47
RPS13YDR064W DNA2P38859 1522 aa5.84□□□□□ -1.48
RPS13YDR064W MSB4Q12317 492 aa5.83□□□□□ -1.48
RPS13YDR064W TRP5P00931 707 aaKnown RBP5.82□□□□□ -1.48
RPS13YDR064W RAM2P29703 316 aa5.82□□□□□ -1.48
RPS13YDR064W SAM3Q08986 587 aa5.82□□□□□ -1.48
RPS13YDR064W RTG1P32607 177 aa5.77□□□□□ -1.49
RPS13YDR064W EAP1P36041 632 aaKnown RBP5.77□□□□□ -1.49
RPS13YDR064W EDS1P38073 919 aa5.75□□□□□ -1.49
RPS13YDR064W GYP5Q12344 894 aa5.75□□□□□ -1.49
RPS13YDR064W DCW1P36091 449 aa5.74□□□□□ -1.49
RPS13YDR064W YJL171CP46992 396 aa5.74□□□□□ -1.49
RPS13YDR064W MAK11P20484 414 aaKnown RBP5.73□□□□□ -1.49
RPS13YDR064W MIF2P35201 549 aa5.73□□□□□ -1.49
RPS13YDR064W YNL035CP53962 389 aaKnown RBP5.71□□□□□ -1.5
RPS13YDR064W URN1Q06525 465 aaKnown RBP5.7□□□□□ -1.5
RPS13YDR064W NCR1Q12200 1170 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms