Protein–RNA interactions for Protein: P17883

SKI3, Superkiller protein 3, yeastyeast

Known RBP Predictions only

Length 1,432 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKI3P17883 YML009W-BYML009W-B 477 nt34.55■■■■□ 3.12
SKI3P17883 NOP1YDL014W 984 nt33.66■■■□□ 2.98
SKI3P17883 NSR1YGR159C 1245 nt33.29■■■□□ 2.92
SKI3P17883 YKL036CYKL036C 393 nt32.04■■■□□ 2.72
SKI3P17883 YJL027CYJL027C 417 nt30.09■■■□□ 2.41
SKI3P17883 Q0297Q0297 156 nt29.86■■■□□ 2.37
SKI3P17883 SCS3YGL126W 1143 nt29.75■■■□□ 2.35
SKI3P17883 SRX1YKL086W 384 nt29.54■■■□□ 2.32
SKI3P17883 MDJ1YFL016C 1536 nt29.04■■■□□ 2.24
SKI3P17883 YCR051WYCR051W 669 nt28.15■■■□□ 2.1
SKI3P17883 YOL085CYOL085C 342 nt27.73■■■□□ 2.03
SKI3P17883 PKP1YIL042C 1185 nt27.35■■□□□ 1.97
SKI3P17883 SCJ1YMR214W 1134 nt27.21■■□□□ 1.95
SKI3P17883 RPP1BYDL130W 321 nt26.81■■□□□ 1.88
SKI3P17883 ATS1YAL020C 1002 nt26.73■■□□□ 1.87
SKI3P17883 TRN1tP(UGG)A 72 nt26.29■■□□□ 1.8
SKI3P17883 SUF9tP(UGG)F 72 nt26.29■■□□□ 1.8
SKI3P17883 SUF8tP(UGG)H 72 nt26.29■■□□□ 1.8
SKI3P17883 tP(UGG)LtP(UGG)L 72 nt26.29■■□□□ 1.8
SKI3P17883 SUF7tP(UGG)M 72 nt26.29■■□□□ 1.8
SKI3P17883 tP(UGG)N1tP(UGG)N1 72 nt26.29■■□□□ 1.8
SKI3P17883 tP(UGG)N2tP(UGG)N2 72 nt26.29■■□□□ 1.8
SKI3P17883 tP(UGG)O1tP(UGG)O1 72 nt26.29■■□□□ 1.8
SKI3P17883 SUF11tP(UGG)O2 72 nt26.29■■□□□ 1.8
SKI3P17883 DBP2YNL112W 1641 nt26■■□□□ 1.75
SKI3P17883 CCC1YLR220W 969 nt26■■□□□ 1.75
SKI3P17883 PET122YER153C 765 nt25.65■■□□□ 1.7
SKI3P17883 SCR1SCR1 522 nt25.43■■□□□ 1.66
SKI3P17883 tP(UGG)O3tP(UGG)O3 72 nt25.11■■□□□ 1.61
SKI3P17883 RTC3YHR087W 336 nt24.93■■□□□ 1.58
SKI3P17883 RRN5YLR141W 1092 nt24.89■■□□□ 1.58
SKI3P17883 RSB1YOR049C 1065 nt24.7■■□□□ 1.55
SKI3P17883 PST2YDR032C 597 nt24.6■■□□□ 1.53
SKI3P17883 RVS167YDR388W 1449 nt24.46■■□□□ 1.51
SKI3P17883 YER088W-BYER088W-B 147 nt24.44■■□□□ 1.5
SKI3P17883 YBR190WYBR190W 312 nt24.28■■□□□ 1.48
SKI3P17883 YDJ1YNL064C 1230 nt24.18■■□□□ 1.46
SKI3P17883 YKL097CYKL097C 411 nt24.14■■□□□ 1.45
SKI3P17883 SHR5YOL110W 714 nt23.9■■□□□ 1.42
SKI3P17883 GAR1YHR089C 618 nt23.62■■□□□ 1.37
SKI3P17883 SHU1YHL006C 453 nt23.5■■□□□ 1.35
SKI3P17883 YOR139CYOR139C 393 nt23.11■■□□□ 1.29
SKI3P17883 DEP1YAL013W 1218 nt23.06■■□□□ 1.28
SKI3P17883 YAL037C-BYAL037C-B 975 nt22.91■■□□□ 1.26
SKI3P17883 TIR1YER011W 765 nt22.76■■□□□ 1.23
SKI3P17883 URN1YPR152C 1398 nt22.73■■□□□ 1.23
SKI3P17883 YNL208WYNL208W 600 nt22.62■■□□□ 1.21
SKI3P17883 NPL3YDR432W 1245 nt22.61■■□□□ 1.21
SKI3P17883 RPN10YHR200W 807 nt22.45■■□□□ 1.18
SKI3P17883 SSA1YAL005C 1929 nt22.37■■□□□ 1.17
SKI3P17883 SRB2YHR041C 633 nt22.36■■□□□ 1.17
SKI3P17883 MNP1YGL068W 585 nt22.28■■□□□ 1.16
SKI3P17883 OPI9YLR338W 858 nt22.14■■□□□ 1.13
SKI3P17883 HOM6YJR139C 1080 nt22.07■■□□□ 1.12
SKI3P17883 YOL037CYOL037C 354 nt22.05■■□□□ 1.12
SKI3P17883 tM(CAU)CtM(CAU)C 72 nt22.02■■□□□ 1.12
SKI3P17883 IMT4tM(CAU)E 72 nt22.02■■□□□ 1.12
SKI3P17883 IMT3tM(CAU)J3 72 nt22.02■■□□□ 1.12
SKI3P17883 IMT1tM(CAU)O1 72 nt22.02■■□□□ 1.12
SKI3P17883 IMT2tM(CAU)P 72 nt22.02■■□□□ 1.12
SKI3P17883 WWM1YFL010C 636 nt22■■□□□ 1.11
SKI3P17883 YGR021WYGR021W 873 nt22■■□□□ 1.11
SKI3P17883 SAH1YER043C 1350 nt21.87■■□□□ 1.09
SKI3P17883 YJR120WYJR120W 351 nt21.76■■□□□ 1.07
SKI3P17883 RKM5YLR137W 1104 nt21.74■■□□□ 1.07
SKI3P17883 YJR018WYJR018W 363 nt21.68■■□□□ 1.06
SKI3P17883 MOT3YMR070W 1473 nt21.62■■□□□ 1.05
SKI3P17883 PUS2YGL063W 1113 nt21.56■■□□□ 1.04
SKI3P17883 PUT4YOR348C 1884 nt21.53■■□□□ 1.04
SKI3P17883 YFL021C-AYFL021C-A 855 nt21.51■■□□□ 1.03
SKI3P17883 PUN1YLR414C 792 nt21.47■■□□□ 1.03
SKI3P17883 SSA3YBL075C 1950 nt21.47■■□□□ 1.03
SKI3P17883 YLR281CYLR281C 468 nt21.45■■□□□ 1.02
SKI3P17883 RPP2BYDR382W 333 nt21.41■■□□□ 1.02
SKI3P17883 ARE1YCR048W 1833 nt21.4■■□□□ 1.02
SKI3P17883 BSC6YOL137W 1494 nt21.35■■□□□ 1.01
SKI3P17883 WHI5YOR083W 888 nt21.27■■□□□ 1
SKI3P17883 BDH2YAL061W 1254 nt21.21■□□□□ 0.99
SKI3P17883 YHR049C-AYHR049C-A 297 nt21.19■□□□□ 0.98
SKI3P17883 PTC2YER089C 1395 nt21.11■□□□□ 0.97
SKI3P17883 FMP45YDL222C 930 nt21.1■□□□□ 0.97
SKI3P17883 YPR011CYPR011C 981 nt21.06■□□□□ 0.96
SKI3P17883 YLR236CYLR236C 324 nt21.04■□□□□ 0.96
SKI3P17883 LSM3YLR438C-A 270 nt20.96■□□□□ 0.95
SKI3P17883 DSK2YMR276W 1122 nt20.93■□□□□ 0.94
SKI3P17883 POA1YBR022W 534 nt20.93■□□□□ 0.94
SKI3P17883 MRPL8YJL063C 717 nt20.92■□□□□ 0.94
SKI3P17883 YCH1YGR203W 447 nt20.83■□□□□ 0.93
SKI3P17883 YBL100CYBL100C 315 nt20.79■□□□□ 0.92
SKI3P17883 UBX6YJL048C 1191 nt20.73■□□□□ 0.91
SKI3P17883 BUD23YCR047C 828 nt20.71■□□□□ 0.91
SKI3P17883 FIS1YIL065C 468 nt20.69■□□□□ 0.9
SKI3P17883 INM2YDR287W 879 nt20.65■□□□□ 0.9
SKI3P17883 NAB2YGL122C 1578 nt20.64■□□□□ 0.9
SKI3P17883 IMP2'YIL154C 1041 nt20.64■□□□□ 0.89
SKI3P17883 YLR154C-GYLR154C-G 150 nt20.63■□□□□ 0.89
SKI3P17883 FPR4YLR449W 1179 nt20.62■□□□□ 0.89
SKI3P17883 DAL1YIR027C 1383 nt20.59■□□□□ 0.89
SKI3P17883 YEL076C-AYEL076C-A 651 nt20.58■□□□□ 0.88
SKI3P17883 YEL076CYEL076C 651 nt20.58■□□□□ 0.88
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms