Protein–RNA interactions for Protein: Q03388

VPS72, Vacuolar protein sorting-associated protein 72, yeastyeast

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS72Q03388 YML009W-BYML009W-B 477 nt22.55■■□□□ 1.2
VPS72Q03388 NOP1YDL014W 984 nt22.1■■□□□ 1.13
VPS72Q03388 NSR1YGR159C 1245 nt22.02■■□□□ 1.12
VPS72Q03388 YKL036CYKL036C 393 nt20.87■□□□□ 0.93
VPS72Q03388 Q0297Q0297 156 nt19.56■□□□□ 0.72
VPS72Q03388 YJL027CYJL027C 417 nt19.54■□□□□ 0.72
VPS72Q03388 SRX1YKL086W 384 nt19.36■□□□□ 0.69
VPS72Q03388 SCS3YGL126W 1143 nt19.25■□□□□ 0.67
VPS72Q03388 MDJ1YFL016C 1536 nt19.1■□□□□ 0.65
VPS72Q03388 YCR051WYCR051W 669 nt18.34■□□□□ 0.53
VPS72Q03388 YOL085CYOL085C 342 nt18.06■□□□□ 0.48
VPS72Q03388 PKP1YIL042C 1185 nt17.7■□□□□ 0.42
VPS72Q03388 SCJ1YMR214W 1134 nt17.68■□□□□ 0.42
VPS72Q03388 RPP1BYDL130W 321 nt17.53■□□□□ 0.4
VPS72Q03388 ATS1YAL020C 1002 nt17.33■□□□□ 0.36
VPS72Q03388 TRN1tP(UGG)A 72 nt17.25■□□□□ 0.35
VPS72Q03388 SUF9tP(UGG)F 72 nt17.25■□□□□ 0.35
VPS72Q03388 SUF8tP(UGG)H 72 nt17.25■□□□□ 0.35
VPS72Q03388 tP(UGG)LtP(UGG)L 72 nt17.25■□□□□ 0.35
VPS72Q03388 SUF7tP(UGG)M 72 nt17.25■□□□□ 0.35
VPS72Q03388 tP(UGG)N1tP(UGG)N1 72 nt17.25■□□□□ 0.35
VPS72Q03388 tP(UGG)N2tP(UGG)N2 72 nt17.25■□□□□ 0.35
VPS72Q03388 tP(UGG)O1tP(UGG)O1 72 nt17.25■□□□□ 0.35
VPS72Q03388 SUF11tP(UGG)O2 72 nt17.25■□□□□ 0.35
VPS72Q03388 DBP2YNL112W 1641 nt17.14■□□□□ 0.33
VPS72Q03388 CCC1YLR220W 969 nt16.98■□□□□ 0.31
VPS72Q03388 PET122YER153C 765 nt16.7■□□□□ 0.26
VPS72Q03388 SCR1SCR1 522 nt16.61■□□□□ 0.25
VPS72Q03388 SSA3YBL075C 1950 nt16.56■□□□□ 0.24
VPS72Q03388 tP(UGG)O3tP(UGG)O3 72 nt16.44■□□□□ 0.22
VPS72Q03388 RRN5YLR141W 1092 nt16.24■□□□□ 0.19
VPS72Q03388 YBR190WYBR190W 312 nt16.17■□□□□ 0.18
VPS72Q03388 RVS167YDR388W 1449 nt16.15■□□□□ 0.18
VPS72Q03388 RSB1YOR049C 1065 nt16.03■□□□□ 0.16
VPS72Q03388 RTC3YHR087W 336 nt16.01■□□□□ 0.15
VPS72Q03388 PST2YDR032C 597 nt15.99■□□□□ 0.15
VPS72Q03388 YER088W-BYER088W-B 147 nt15.94■□□□□ 0.14
VPS72Q03388 YDJ1YNL064C 1230 nt15.93■□□□□ 0.14
VPS72Q03388 Q0182Q0182 405 nt15.78■□□□□ 0.12
VPS72Q03388 SHR5YOL110W 714 nt15.74■□□□□ 0.11
VPS72Q03388 YKL097CYKL097C 411 nt15.58■□□□□ 0.08
VPS72Q03388 GAR1YHR089C 618 nt15.43■□□□□ 0.06
VPS72Q03388 SHU1YHL006C 453 nt15.22■□□□□ 0.03
VPS72Q03388 DEP1YAL013W 1218 nt15.08■□□□□ 0
VPS72Q03388 URN1YPR152C 1398 nt14.98□□□□□ -0.01
VPS72Q03388 YNL208WYNL208W 600 nt14.94□□□□□ -0.02
VPS72Q03388 TIR1YER011W 765 nt14.93□□□□□ -0.02
VPS72Q03388 YOR139CYOR139C 393 nt14.91□□□□□ -0.02
VPS72Q03388 PUT4YOR348C 1884 nt14.89□□□□□ -0.03
VPS72Q03388 RPN10YHR200W 807 nt14.87□□□□□ -0.03
VPS72Q03388 YAL037C-BYAL037C-B 975 nt14.79□□□□□ -0.04
VPS72Q03388 MOT3YMR070W 1473 nt14.72□□□□□ -0.05
VPS72Q03388 OPI9YLR338W 858 nt14.7□□□□□ -0.06
VPS72Q03388 SSA1YAL005C 1929 nt14.66□□□□□ -0.06
VPS72Q03388 NPL3YDR432W 1245 nt14.63□□□□□ -0.07
VPS72Q03388 ARE1YCR048W 1833 nt14.54□□□□□ -0.08
VPS72Q03388 SRB2YHR041C 633 nt14.53□□□□□ -0.08
VPS72Q03388 SAH1YER043C 1350 nt14.48□□□□□ -0.09
VPS72Q03388 YGR021WYGR021W 873 nt14.42□□□□□ -0.1
VPS72Q03388 HOM6YJR139C 1080 nt14.42□□□□□ -0.1
VPS72Q03388 MNP1YGL068W 585 nt14.4□□□□□ -0.1
VPS72Q03388 YOL037CYOL037C 354 nt14.37□□□□□ -0.11
VPS72Q03388 POA1YBR022W 534 nt14.37□□□□□ -0.11
VPS72Q03388 WWM1YFL010C 636 nt14.35□□□□□ -0.11
VPS72Q03388 YJR018WYJR018W 363 nt14.33□□□□□ -0.12
VPS72Q03388 SSA4YER103W 1929 nt14.33□□□□□ -0.12
VPS72Q03388 YHR049C-AYHR049C-A 297 nt14.31□□□□□ -0.12
VPS72Q03388 YJR120WYJR120W 351 nt14.29□□□□□ -0.12
VPS72Q03388 tM(CAU)CtM(CAU)C 72 nt14.28□□□□□ -0.12
VPS72Q03388 IMT4tM(CAU)E 72 nt14.28□□□□□ -0.12
VPS72Q03388 IMT3tM(CAU)J3 72 nt14.28□□□□□ -0.12
VPS72Q03388 IMT1tM(CAU)O1 72 nt14.28□□□□□ -0.12
VPS72Q03388 IMT2tM(CAU)P 72 nt14.28□□□□□ -0.12
VPS72Q03388 PUN1YLR414C 792 nt14.27□□□□□ -0.13
VPS72Q03388 SPT5YML010W 3192 nt14.22□□□□□ -0.13
VPS72Q03388 RKM5YLR137W 1104 nt14.19□□□□□ -0.14
VPS72Q03388 RPP2BYDR382W 333 nt14.14□□□□□ -0.15
VPS72Q03388 YFL021C-AYFL021C-A 855 nt14.14□□□□□ -0.15
VPS72Q03388 BSC6YOL137W 1494 nt14.11□□□□□ -0.15
VPS72Q03388 BDH2YAL061W 1254 nt13.99□□□□□ -0.17
VPS72Q03388 YLR281CYLR281C 468 nt13.98□□□□□ -0.17
VPS72Q03388 PTC2YER089C 1395 nt13.97□□□□□ -0.17
VPS72Q03388 PUS2YGL063W 1113 nt13.97□□□□□ -0.17
VPS72Q03388 BUD23YCR047C 828 nt13.93□□□□□ -0.18
VPS72Q03388 PAC11YDR488C 1602 nt13.92□□□□□ -0.18
VPS72Q03388 BDF1YLR399C 2061 nt13.89□□□□□ -0.19
VPS72Q03388 LSM3YLR438C-A 270 nt13.89□□□□□ -0.19
VPS72Q03388 WHI5YOR083W 888 nt13.84□□□□□ -0.19
VPS72Q03388 NAB2YGL122C 1578 nt13.8□□□□□ -0.2
VPS72Q03388 FPS1YLL043W 2010 nt13.78□□□□□ -0.2
VPS72Q03388 INM2YDR287W 879 nt13.76□□□□□ -0.21
VPS72Q03388 YBL100CYBL100C 315 nt13.71□□□□□ -0.21
VPS72Q03388 FIS1YIL065C 468 nt13.67□□□□□ -0.22
VPS72Q03388 DAL1YIR027C 1383 nt13.67□□□□□ -0.22
VPS72Q03388 TAT1YBR069C 1860 nt13.64□□□□□ -0.23
VPS72Q03388 YPR011CYPR011C 981 nt13.63□□□□□ -0.23
VPS72Q03388 FMP45YDL222C 930 nt13.62□□□□□ -0.23
VPS72Q03388 DSK2YMR276W 1122 nt13.62□□□□□ -0.23
VPS72Q03388 YLR236CYLR236C 324 nt13.6□□□□□ -0.23
VPS72Q03388 NVJ2YPR091C 2313 nt13.6□□□□□ -0.23
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms