RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 NPL4P33755 580 aa5.57□□□□□ -1.52
snR42snR42 IFH1P39520 1085 aa5.57□□□□□ -1.52
snR42snR42 CLA4P48562 842 aa5.57□□□□□ -1.52
snR42snR42 LAM6Q08001 693 aa5.57□□□□□ -1.52
snR42snR42 SPT16P32558 1035 aaKnown RBP5.55□□□□□ -1.52
snR42snR42 MDS3P53094 1487 aa5.54□□□□□ -1.52
snR42snR42 CDC4P07834 779 aa5.54□□□□□ -1.52
snR42snR42 TY1A-DR4O74302 440 aa5.53□□□□□ -1.52
snR42snR42 TY1A-HP0C2I4 478 aaKnown RBP5.53□□□□□ -1.52
snR42snR42 TY1A-AP0CX57 440 aa5.53□□□□□ -1.52
snR42snR42 TY1A-PR1P0CX58 440 aa5.53□□□□□ -1.52
snR42snR42 TY1A-ORP0CX59 440 aa5.53□□□□□ -1.52
snR42snR42 TY1A-PR2P0CX60 440 aa5.53□□□□□ -1.52
snR42snR42 TY1A-DR5P0CX65 440 aa5.53□□□□□ -1.52
snR42snR42 TY1A-ER2P0CX66 440 aa5.53□□□□□ -1.52
snR42snR42 TY1A-GR3P0CX67 440 aa5.53□□□□□ -1.52
snR42snR42 TY1A-LR1P0CX68 440 aa5.53□□□□□ -1.52
snR42snR42 TY1A-MR2P0CX69 440 aa5.53□□□□□ -1.52
snR42snR42 GCD11P32481 527 aaKnown RBP5.53□□□□□ -1.52
snR42snR42 TY1A-JR2P47099 440 aa5.53□□□□□ -1.52
snR42snR42 TY1A-DR1Q03856 440 aa5.53□□□□□ -1.52
snR42snR42 TY1A-ML1Q04706 440 aaKnown RBP5.53□□□□□ -1.52
snR42snR42 TY1A-BRQ12217 440 aa5.53□□□□□ -1.52
snR42snR42 TY1A-NL2Q12470 440 aa5.53□□□□□ -1.52
snR42snR42 TY1A-GR2Q12485 440 aa5.53□□□□□ -1.52
snR42snR42 SSN2P38931 1420 aa5.52□□□□□ -1.53
snR42snR42 SEC2P17065 759 aa5.51□□□□□ -1.53
snR42snR42 ORC6P38826 435 aa5.51□□□□□ -1.53
snR42snR42 REF2P42073 533 aaPredicted RBP5.51□□□□□ -1.53
snR42snR42 FRK1Q03002 865 aaPredicted RBP5.51□□□□□ -1.53
snR42snR42 TAF2P23255 1407 aa5.49□□□□□ -1.53
snR42snR42 PAT1P25644 796 aaKnown RBP5.49□□□□□ -1.53
snR42snR42 MET22P32179 357 aa5.49□□□□□ -1.53
snR42snR42 ENV9Q08651 330 aa5.49□□□□□ -1.53
snR42snR42 REV3P14284 1504 aa5.48□□□□□ -1.53
snR42snR42 BDP1P46678 594 aa5.48□□□□□ -1.53
snR42snR42 HED1Q03937 162 aa5.47□□□□□ -1.53
snR42snR42 PEP1P32319 1579 aa5.46□□□□□ -1.53
snR42snR42 MVP1P40959 511 aaKnown RBP5.46□□□□□ -1.54
snR42snR42 RRN7P40992 514 aa5.46□□□□□ -1.54
snR42snR42 SKI3P17883 1432 aaKnown RBP5.46□□□□□ -1.54
snR42snR42 ATG2P53855 1592 aa5.46□□□□□ -1.54
snR42snR42 YPR148CQ06523 435 aa5.45□□□□□ -1.54
snR42snR42 MAK21Q12176 1025 aaKnown RBP5.44□□□□□ -1.54
snR42snR42 YDR444WQ04093 687 aa5.43□□□□□ -1.54
snR42snR42 BPT1P14772 1559 aa5.42□□□□□ -1.54
snR42snR42 COX6P00427 148 aa5.42□□□□□ -1.54
snR42snR42 YPR109WQ06104 294 aa5.42□□□□□ -1.54
snR42snR42 RGR1P19263 1082 aa5.4□□□□□ -1.54
snR42snR42 LCB5Q06147 687 aaKnown RBP5.39□□□□□ -1.55
snR42snR42 AFT1P22149 690 aa5.38□□□□□ -1.55
snR42snR42 ASH1P34233 588 aa5.38□□□□□ -1.55
snR42snR42 SIN3P22579 1536 aa5.38□□□□□ -1.55
snR42snR42 MET32Q12041 191 aa5.37□□□□□ -1.55
snR42snR42 MOD5P07884 428 aa5.36□□□□□ -1.55
snR42snR42 KEX2P13134 814 aa5.36□□□□□ -1.55
snR42snR42 HST3P53687 447 aa5.36□□□□□ -1.55
snR42snR42 YDL176WQ12027 708 aa5.36□□□□□ -1.55
snR42snR42 SSK2P53599 1579 aa5.36□□□□□ -1.55
snR42snR42 ESP1Q03018 1630 aa5.36□□□□□ -1.55
snR42snR42 VPS70P47161 811 aa5.34□□□□□ -1.55
snR42snR42 ERF2Q06551 359 aa5.34□□□□□ -1.55
snR42snR42 PAC1P39946 494 aaKnown RBP5.33□□□□□ -1.56
snR42snR42 RQC2Q12532 1038 aaKnown RBP5.33□□□□□ -1.56
snR42snR42 RRD1P40454 393 aaKnown RBP5.32□□□□□ -1.56
snR42snR42 YCF1P39109 1515 aaKnown RBP5.32□□□□□ -1.56
snR42snR42 UFD4P33202 1483 aa5.31□□□□□ -1.56
snR42snR42 MYO2P19524 1574 aaKnown RBP5.3□□□□□ -1.56
snR42snR42 PUS5Q06244 254 aa5.3□□□□□ -1.56
snR42snR42 YJR115WP47152 169 aa5.29□□□□□ -1.56
snR42snR42 AGE1Q04412 482 aa5.29□□□□□ -1.56
snR42snR42 CLB5P30283 435 aa5.28□□□□□ -1.56
snR42snR42 TUB4P53378 473 aa5.28□□□□□ -1.56
snR42snR42 PSE1P32337 1089 aaKnown RBP5.27□□□□□ -1.57
snR42snR42 RTF1P53064 558 aa5.27□□□□□ -1.57
snR42snR42 SCC2Q04002 1493 aa5.26□□□□□ -1.57
snR42snR42 YPK9Q12697 1472 aa5.26□□□□□ -1.57
snR42snR42 MSB3P48566 633 aaPredicted RBP5.25□□□□□ -1.57
snR42snR42 TPD3P31383 635 aa5.23□□□□□ -1.57
snR42snR42 YNL115CP53925 644 aa5.23□□□□□ -1.57
snR42snR42 MTC5Q03897 1148 aa5.23□□□□□ -1.57
snR42snR42 ESC1Q03661 1658 aaKnown RBP5.22□□□□□ -1.57
snR42snR42 ACO2P39533 789 aa5.22□□□□□ -1.57
snR42snR42 KXD1P53158 218 aa5.22□□□□□ -1.57
snR42snR42 RPO31P04051 1460 aa5.21□□□□□ -1.58
snR42snR42 CAF120P53836 1060 aa5.21□□□□□ -1.58
snR42snR42 SYH1Q02875 849 aaKnown RBP5.21□□□□□ -1.58
snR42snR42 CDC25P04821 1589 aa5.21□□□□□ -1.58
snR42snR42 CHD1P32657 1468 aa5.2□□□□□ -1.58
snR42snR42 TY2B-LR1P0C2J3 1770 aa5.2□□□□□ -1.58
snR42snR42 TY2B-FP0CX63 1770 aa5.2□□□□□ -1.58
snR42snR42 TY2B-GR2P0CX64 1770 aa5.2□□□□□ -1.58
snR42snR42 TY2B-CP25384 1770 aa5.2□□□□□ -1.58
snR42snR42 TY2B-DR2Q03494 1770 aa5.2□□□□□ -1.58
snR42snR42 TY1B-DR1Q03855 1755 aa5.2□□□□□ -1.58
snR42snR42 TY2B-DR3Q07791 1770 aaKnown RBP5.2□□□□□ -1.58
snR42snR42 TY2B-OR1Q12113 1770 aa5.2□□□□□ -1.58
snR42snR42 TY2B-DR1Q12472 1770 aa5.2□□□□□ -1.58
snR42snR42 TY2B-OR2Q12501 1770 aa5.2□□□□□ -1.58
snR42snR42 SIT4P20604 311 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms