Protein–RNA interactions for Protein: P0CX63

TY2B-F, Transposon Ty2-F Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-FP0CX63 YML009W-BYML009W-B 477 nt33.57■■■□□ 2.96
TY2B-FP0CX63 NOP1YDL014W 984 nt32.15■■■□□ 2.74
TY2B-FP0CX63 NSR1YGR159C 1245 nt31.91■■■□□ 2.7
TY2B-FP0CX63 YKL036CYKL036C 393 nt30.91■■■□□ 2.54
TY2B-FP0CX63 YJL027CYJL027C 417 nt28.96■■■□□ 2.23
TY2B-FP0CX63 SCS3YGL126W 1143 nt28.85■■■□□ 2.21
TY2B-FP0CX63 Q0297Q0297 156 nt28.73■■■□□ 2.19
TY2B-FP0CX63 SRX1YKL086W 384 nt28.62■■■□□ 2.17
TY2B-FP0CX63 MDJ1YFL016C 1536 nt28.32■■■□□ 2.12
TY2B-FP0CX63 YCR051WYCR051W 669 nt27.27■■□□□ 1.96
TY2B-FP0CX63 YOL085CYOL085C 342 nt26.58■■□□□ 1.85
TY2B-FP0CX63 PKP1YIL042C 1185 nt26.54■■□□□ 1.84
TY2B-FP0CX63 SCJ1YMR214W 1134 nt26■■□□□ 1.75
TY2B-FP0CX63 RPP1BYDL130W 321 nt25.74■■□□□ 1.71
TY2B-FP0CX63 ATS1YAL020C 1002 nt25.67■■□□□ 1.7
TY2B-FP0CX63 TRN1tP(UGG)A 72 nt25.51■■□□□ 1.67
TY2B-FP0CX63 SUF9tP(UGG)F 72 nt25.51■■□□□ 1.67
TY2B-FP0CX63 SUF8tP(UGG)H 72 nt25.51■■□□□ 1.67
TY2B-FP0CX63 tP(UGG)LtP(UGG)L 72 nt25.51■■□□□ 1.67
TY2B-FP0CX63 SUF7tP(UGG)M 72 nt25.51■■□□□ 1.67
TY2B-FP0CX63 tP(UGG)N1tP(UGG)N1 72 nt25.51■■□□□ 1.67
TY2B-FP0CX63 tP(UGG)N2tP(UGG)N2 72 nt25.51■■□□□ 1.67
TY2B-FP0CX63 tP(UGG)O1tP(UGG)O1 72 nt25.51■■□□□ 1.67
TY2B-FP0CX63 SUF11tP(UGG)O2 72 nt25.51■■□□□ 1.67
TY2B-FP0CX63 DBP2YNL112W 1641 nt25.27■■□□□ 1.64
TY2B-FP0CX63 CCC1YLR220W 969 nt25.17■■□□□ 1.62
TY2B-FP0CX63 PET122YER153C 765 nt24.87■■□□□ 1.57
TY2B-FP0CX63 SCR1SCR1 522 nt24.47■■□□□ 1.51
TY2B-FP0CX63 tP(UGG)O3tP(UGG)O3 72 nt24.26■■□□□ 1.47
TY2B-FP0CX63 RTC3YHR087W 336 nt24.07■■□□□ 1.44
TY2B-FP0CX63 RRN5YLR141W 1092 nt23.98■■□□□ 1.43
TY2B-FP0CX63 RSB1YOR049C 1065 nt23.94■■□□□ 1.42
TY2B-FP0CX63 PST2YDR032C 597 nt23.6■■□□□ 1.37
TY2B-FP0CX63 RVS167YDR388W 1449 nt23.57■■□□□ 1.36
TY2B-FP0CX63 YER088W-BYER088W-B 147 nt23.55■■□□□ 1.36
TY2B-FP0CX63 YBR190WYBR190W 312 nt23.35■■□□□ 1.33
TY2B-FP0CX63 YKL097CYKL097C 411 nt23.3■■□□□ 1.32
TY2B-FP0CX63 YDJ1YNL064C 1230 nt23.19■■□□□ 1.3
TY2B-FP0CX63 SHR5YOL110W 714 nt23.06■■□□□ 1.28
TY2B-FP0CX63 GAR1YHR089C 618 nt22.83■■□□□ 1.24
TY2B-FP0CX63 SHU1YHL006C 453 nt22.76■■□□□ 1.23
TY2B-FP0CX63 DEP1YAL013W 1218 nt22.51■■□□□ 1.19
TY2B-FP0CX63 YOR139CYOR139C 393 nt22.44■■□□□ 1.18
TY2B-FP0CX63 YAL037C-BYAL037C-B 975 nt22.38■■□□□ 1.17
TY2B-FP0CX63 URN1YPR152C 1398 nt22.11■■□□□ 1.13
TY2B-FP0CX63 TIR1YER011W 765 nt21.94■■□□□ 1.1
TY2B-FP0CX63 SRB2YHR041C 633 nt21.87■■□□□ 1.09
TY2B-FP0CX63 NPL3YDR432W 1245 nt21.84■■□□□ 1.09
TY2B-FP0CX63 MNP1YGL068W 585 nt21.8■■□□□ 1.08
TY2B-FP0CX63 YNL208WYNL208W 600 nt21.71■■□□□ 1.07
TY2B-FP0CX63 SSA1YAL005C 1929 nt21.65■■□□□ 1.06
TY2B-FP0CX63 RPN10YHR200W 807 nt21.56■■□□□ 1.04
TY2B-FP0CX63 WWM1YFL010C 636 nt21.41■■□□□ 1.02
TY2B-FP0CX63 OPI9YLR338W 858 nt21.36■■□□□ 1.01
TY2B-FP0CX63 HOM6YJR139C 1080 nt21.36■■□□□ 1.01
TY2B-FP0CX63 SAH1YER043C 1350 nt21.29■■□□□ 1
TY2B-FP0CX63 YJR120WYJR120W 351 nt21.28■■□□□ 1
TY2B-FP0CX63 YOL037CYOL037C 354 nt21.28■■□□□ 1
TY2B-FP0CX63 YGR021WYGR021W 873 nt21.17■□□□□ 0.98
TY2B-FP0CX63 tM(CAU)CtM(CAU)C 72 nt21.11■□□□□ 0.97
TY2B-FP0CX63 IMT4tM(CAU)E 72 nt21.11■□□□□ 0.97
TY2B-FP0CX63 IMT3tM(CAU)J3 72 nt21.11■□□□□ 0.97
TY2B-FP0CX63 IMT1tM(CAU)O1 72 nt21.11■□□□□ 0.97
TY2B-FP0CX63 IMT2tM(CAU)P 72 nt21.11■□□□□ 0.97
TY2B-FP0CX63 YJR018WYJR018W 363 nt20.98■□□□□ 0.95
TY2B-FP0CX63 RKM5YLR137W 1104 nt20.95■□□□□ 0.94
TY2B-FP0CX63 MOT3YMR070W 1473 nt20.85■□□□□ 0.93
TY2B-FP0CX63 PUS2YGL063W 1113 nt20.82■□□□□ 0.92
TY2B-FP0CX63 SSA3YBL075C 1950 nt20.82■□□□□ 0.92
TY2B-FP0CX63 ARE1YCR048W 1833 nt20.81■□□□□ 0.92
TY2B-FP0CX63 YHR049C-AYHR049C-A 297 nt20.77■□□□□ 0.91
TY2B-FP0CX63 PUT4YOR348C 1884 nt20.76■□□□□ 0.91
TY2B-FP0CX63 YFL021C-AYFL021C-A 855 nt20.75■□□□□ 0.91
TY2B-FP0CX63 PUN1YLR414C 792 nt20.66■□□□□ 0.9
TY2B-FP0CX63 YLR281CYLR281C 468 nt20.64■□□□□ 0.89
TY2B-FP0CX63 RPP2BYDR382W 333 nt20.59■□□□□ 0.89
TY2B-FP0CX63 WHI5YOR083W 888 nt20.55■□□□□ 0.88
TY2B-FP0CX63 YLR236CYLR236C 324 nt20.54■□□□□ 0.88
TY2B-FP0CX63 BDH2YAL061W 1254 nt20.52■□□□□ 0.88
TY2B-FP0CX63 BSC6YOL137W 1494 nt20.52■□□□□ 0.88
TY2B-FP0CX63 FMP45YDL222C 930 nt20.45■□□□□ 0.86
TY2B-FP0CX63 YPR011CYPR011C 981 nt20.44■□□□□ 0.86
TY2B-FP0CX63 PTC2YER089C 1395 nt20.35■□□□□ 0.85
TY2B-FP0CX63 POA1YBR022W 534 nt20.25■□□□□ 0.83
TY2B-FP0CX63 BUD23YCR047C 828 nt20.23■□□□□ 0.83
TY2B-FP0CX63 DSK2YMR276W 1122 nt20.21■□□□□ 0.83
TY2B-FP0CX63 FIS1YIL065C 468 nt20.18■□□□□ 0.82
TY2B-FP0CX63 YBL100CYBL100C 315 nt20.16■□□□□ 0.82
TY2B-FP0CX63 LPX1YOR084W 1164 nt20.08■□□□□ 0.8
TY2B-FP0CX63 YLR154C-GYLR154C-G 150 nt20.03■□□□□ 0.8
TY2B-FP0CX63 UBX6YJL048C 1191 nt20■□□□□ 0.79
TY2B-FP0CX63 YCH1YGR203W 447 nt20■□□□□ 0.79
TY2B-FP0CX63 LSM3YLR438C-A 270 nt20■□□□□ 0.79
TY2B-FP0CX63 SPP1YPL138C 1062 nt20■□□□□ 0.79
TY2B-FP0CX63 MRPL8YJL063C 717 nt19.98■□□□□ 0.79
TY2B-FP0CX63 RTG1YOL067C 534 nt19.98■□□□□ 0.79
TY2B-FP0CX63 PHO4YFR034C 939 nt19.97■□□□□ 0.79
TY2B-FP0CX63 FPR4YLR449W 1179 nt19.93■□□□□ 0.78
TY2B-FP0CX63 NAB2YGL122C 1578 nt19.93■□□□□ 0.78
TY2B-FP0CX63 IMP2'YIL154C 1041 nt19.86■□□□□ 0.77
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms