Protein–RNA interactions for Protein: P32657

CHD1, Chromo domain-containing protein 1, yeastyeast

Predictions only

Length 1,468 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHD1P32657 YML009W-BYML009W-B 477 nt33.19■■■□□ 2.9
CHD1P32657 NOP1YDL014W 984 nt32.28■■■□□ 2.76
CHD1P32657 NSR1YGR159C 1245 nt31.74■■■□□ 2.67
CHD1P32657 YKL036CYKL036C 393 nt30.84■■■□□ 2.53
CHD1P32657 YJL027CYJL027C 417 nt29.03■■■□□ 2.24
CHD1P32657 SCS3YGL126W 1143 nt28.71■■■□□ 2.19
CHD1P32657 Q0297Q0297 156 nt28.61■■■□□ 2.17
CHD1P32657 MDJ1YFL016C 1536 nt28.32■■■□□ 2.12
CHD1P32657 SRX1YKL086W 384 nt28.32■■■□□ 2.12
CHD1P32657 YCR051WYCR051W 669 nt27.09■■□□□ 1.93
CHD1P32657 YOL085CYOL085C 342 nt26.66■■□□□ 1.86
CHD1P32657 PKP1YIL042C 1185 nt26.39■■□□□ 1.82
CHD1P32657 SCJ1YMR214W 1134 nt26.26■■□□□ 1.79
CHD1P32657 ATS1YAL020C 1002 nt25.78■■□□□ 1.72
CHD1P32657 RPP1BYDL130W 321 nt25.72■■□□□ 1.71
CHD1P32657 TRN1tP(UGG)A 72 nt25.15■■□□□ 1.62
CHD1P32657 SUF9tP(UGG)F 72 nt25.15■■□□□ 1.62
CHD1P32657 SUF8tP(UGG)H 72 nt25.15■■□□□ 1.62
CHD1P32657 tP(UGG)LtP(UGG)L 72 nt25.15■■□□□ 1.62
CHD1P32657 SUF7tP(UGG)M 72 nt25.15■■□□□ 1.62
CHD1P32657 tP(UGG)N1tP(UGG)N1 72 nt25.15■■□□□ 1.62
CHD1P32657 tP(UGG)N2tP(UGG)N2 72 nt25.15■■□□□ 1.62
CHD1P32657 tP(UGG)O1tP(UGG)O1 72 nt25.15■■□□□ 1.62
CHD1P32657 SUF11tP(UGG)O2 72 nt25.15■■□□□ 1.62
CHD1P32657 CCC1YLR220W 969 nt24.98■■□□□ 1.59
CHD1P32657 DBP2YNL112W 1641 nt24.84■■□□□ 1.57
CHD1P32657 PET122YER153C 765 nt24.66■■□□□ 1.54
CHD1P32657 SCR1SCR1 522 nt24.47■■□□□ 1.51
CHD1P32657 RTC3YHR087W 336 nt24.19■■□□□ 1.46
CHD1P32657 tP(UGG)O3tP(UGG)O3 72 nt24.07■■□□□ 1.44
CHD1P32657 RRN5YLR141W 1092 nt23.91■■□□□ 1.42
CHD1P32657 RSB1YOR049C 1065 nt23.83■■□□□ 1.41
CHD1P32657 YBR190WYBR190W 312 nt23.67■■□□□ 1.38
CHD1P32657 PST2YDR032C 597 nt23.66■■□□□ 1.38
CHD1P32657 YER088W-BYER088W-B 147 nt23.47■■□□□ 1.35
CHD1P32657 RVS167YDR388W 1449 nt23.4■■□□□ 1.34
CHD1P32657 YKL097CYKL097C 411 nt23.36■■□□□ 1.33
CHD1P32657 YDJ1YNL064C 1230 nt23.11■■□□□ 1.29
CHD1P32657 SHR5YOL110W 714 nt22.84■■□□□ 1.25
CHD1P32657 GAR1YHR089C 618 nt22.68■■□□□ 1.22
CHD1P32657 SHU1YHL006C 453 nt22.66■■□□□ 1.22
CHD1P32657 YOR139CYOR139C 393 nt22.31■■□□□ 1.16
CHD1P32657 DEP1YAL013W 1218 nt22.22■■□□□ 1.15
CHD1P32657 YAL037C-BYAL037C-B 975 nt22.12■■□□□ 1.13
CHD1P32657 URN1YPR152C 1398 nt22■■□□□ 1.11
CHD1P32657 NPL3YDR432W 1245 nt21.87■■□□□ 1.09
CHD1P32657 TIR1YER011W 765 nt21.8■■□□□ 1.08
CHD1P32657 YNL208WYNL208W 600 nt21.59■■□□□ 1.05
CHD1P32657 RPN10YHR200W 807 nt21.52■■□□□ 1.03
CHD1P32657 PUT4YOR348C 1884 nt21.49■■□□□ 1.03
CHD1P32657 SAH1YER043C 1350 nt21.49■■□□□ 1.03
CHD1P32657 MNP1YGL068W 585 nt21.48■■□□□ 1.03
CHD1P32657 SRB2YHR041C 633 nt21.43■■□□□ 1.02
CHD1P32657 OPI9YLR338W 858 nt21.43■■□□□ 1.02
CHD1P32657 SSA1YAL005C 1929 nt21.4■■□□□ 1.02
CHD1P32657 tM(CAU)CtM(CAU)C 72 nt21.22■□□□□ 0.99
CHD1P32657 IMT4tM(CAU)E 72 nt21.22■□□□□ 0.99
CHD1P32657 IMT3tM(CAU)J3 72 nt21.22■□□□□ 0.99
CHD1P32657 IMT1tM(CAU)O1 72 nt21.22■□□□□ 0.99
CHD1P32657 IMT2tM(CAU)P 72 nt21.22■□□□□ 0.99
CHD1P32657 YOL037CYOL037C 354 nt21.22■□□□□ 0.99
CHD1P32657 ARE1YCR048W 1833 nt21.22■□□□□ 0.99
CHD1P32657 YHR049C-AYHR049C-A 297 nt21.2■□□□□ 0.98
CHD1P32657 HOM6YJR139C 1080 nt21.18■□□□□ 0.98
CHD1P32657 WWM1YFL010C 636 nt21.12■□□□□ 0.97
CHD1P32657 YGR021WYGR021W 873 nt21.11■□□□□ 0.97
CHD1P32657 POA1YBR022W 534 nt20.96■□□□□ 0.95
CHD1P32657 MOT3YMR070W 1473 nt20.92■□□□□ 0.94
CHD1P32657 YJR018WYJR018W 363 nt20.88■□□□□ 0.93
CHD1P32657 RKM5YLR137W 1104 nt20.88■□□□□ 0.93
CHD1P32657 PUN1YLR414C 792 nt20.82■□□□□ 0.92
CHD1P32657 BSC6YOL137W 1494 nt20.81■□□□□ 0.92
CHD1P32657 PUS2YGL063W 1113 nt20.81■□□□□ 0.92
CHD1P32657 BUD23YCR047C 828 nt20.74■□□□□ 0.91
CHD1P32657 YJR120WYJR120W 351 nt20.74■□□□□ 0.91
CHD1P32657 PTC2YER089C 1395 nt20.66■□□□□ 0.9
CHD1P32657 YLR281CYLR281C 468 nt20.6■□□□□ 0.89
CHD1P32657 YFL021C-AYFL021C-A 855 nt20.59■□□□□ 0.89
CHD1P32657 RPP2BYDR382W 333 nt20.48■□□□□ 0.87
CHD1P32657 WHI5YOR083W 888 nt20.45■□□□□ 0.86
CHD1P32657 SSA3YBL075C 1950 nt20.41■□□□□ 0.86
CHD1P32657 FMP45YDL222C 930 nt20.41■□□□□ 0.86
CHD1P32657 FPR4YLR449W 1179 nt20.3■□□□□ 0.84
CHD1P32657 YLR236CYLR236C 324 nt20.29■□□□□ 0.84
CHD1P32657 FIS1YIL065C 468 nt20.25■□□□□ 0.83
CHD1P32657 BDH2YAL061W 1254 nt20.25■□□□□ 0.83
CHD1P32657 YPR011CYPR011C 981 nt20.25■□□□□ 0.83
CHD1P32657 NAB2YGL122C 1578 nt20.25■□□□□ 0.83
CHD1P32657 MRPL8YJL063C 717 nt20.18■□□□□ 0.82
CHD1P32657 UBX6YJL048C 1191 nt20.15■□□□□ 0.82
CHD1P32657 DSK2YMR276W 1122 nt20.15■□□□□ 0.82
CHD1P32657 YCH1YGR203W 447 nt20.08■□□□□ 0.81
CHD1P32657 DAL1YIR027C 1383 nt20.06■□□□□ 0.8
CHD1P32657 PHO4YFR034C 939 nt20.05■□□□□ 0.8
CHD1P32657 YBL100CYBL100C 315 nt20.05■□□□□ 0.8
CHD1P32657 LSM3YLR438C-A 270 nt19.99■□□□□ 0.79
CHD1P32657 YEL076C-AYEL076C-A 651 nt19.88■□□□□ 0.77
CHD1P32657 YEL076CYEL076C 651 nt19.88■□□□□ 0.77
CHD1P32657 ADO1YJR105W 1023 nt19.88■□□□□ 0.77
CHD1P32657 YLR464WYLR464W 651 nt19.88■□□□□ 0.77
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms