Protein–RNA interactions for Protein: P04051

RPO31, DNA-directed RNA polymerase III subunit RPC1, yeastyeast

Predictions only

Length 1,460 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPO31P04051 YML009W-BYML009W-B 477 nt33.8■■■■□ 3
RPO31P04051 NOP1YDL014W 984 nt32.72■■■□□ 2.83
RPO31P04051 NSR1YGR159C 1245 nt32.39■■■□□ 2.78
RPO31P04051 YKL036CYKL036C 393 nt31.13■■■□□ 2.57
RPO31P04051 YJL027CYJL027C 417 nt29.29■■■□□ 2.28
RPO31P04051 Q0297Q0297 156 nt28.95■■■□□ 2.22
RPO31P04051 SCS3YGL126W 1143 nt28.91■■■□□ 2.22
RPO31P04051 SRX1YKL086W 384 nt28.73■■■□□ 2.19
RPO31P04051 MDJ1YFL016C 1536 nt28.56■■■□□ 2.16
RPO31P04051 YCR051WYCR051W 669 nt27.52■■■□□ 2
RPO31P04051 YOL085CYOL085C 342 nt26.91■■□□□ 1.9
RPO31P04051 PKP1YIL042C 1185 nt26.74■■□□□ 1.87
RPO31P04051 SCJ1YMR214W 1134 nt26.16■■□□□ 1.78
RPO31P04051 RPP1BYDL130W 321 nt26.04■■□□□ 1.76
RPO31P04051 ATS1YAL020C 1002 nt25.89■■□□□ 1.73
RPO31P04051 TRN1tP(UGG)A 72 nt25.63■■□□□ 1.69
RPO31P04051 SUF9tP(UGG)F 72 nt25.63■■□□□ 1.69
RPO31P04051 SUF8tP(UGG)H 72 nt25.63■■□□□ 1.69
RPO31P04051 tP(UGG)LtP(UGG)L 72 nt25.63■■□□□ 1.69
RPO31P04051 SUF7tP(UGG)M 72 nt25.63■■□□□ 1.69
RPO31P04051 tP(UGG)N1tP(UGG)N1 72 nt25.63■■□□□ 1.69
RPO31P04051 tP(UGG)N2tP(UGG)N2 72 nt25.63■■□□□ 1.69
RPO31P04051 tP(UGG)O1tP(UGG)O1 72 nt25.63■■□□□ 1.69
RPO31P04051 SUF11tP(UGG)O2 72 nt25.63■■□□□ 1.69
RPO31P04051 CCC1YLR220W 969 nt25.49■■□□□ 1.67
RPO31P04051 DBP2YNL112W 1641 nt25.39■■□□□ 1.65
RPO31P04051 PET122YER153C 765 nt25.02■■□□□ 1.6
RPO31P04051 SCR1SCR1 522 nt24.75■■□□□ 1.55
RPO31P04051 tP(UGG)O3tP(UGG)O3 72 nt24.46■■□□□ 1.51
RPO31P04051 RRN5YLR141W 1092 nt24.23■■□□□ 1.47
RPO31P04051 RTC3YHR087W 336 nt24.19■■□□□ 1.46
RPO31P04051 RSB1YOR049C 1065 nt24.13■■□□□ 1.45
RPO31P04051 RVS167YDR388W 1449 nt23.93■■□□□ 1.42
RPO31P04051 PST2YDR032C 597 nt23.77■■□□□ 1.4
RPO31P04051 YER088W-BYER088W-B 147 nt23.76■■□□□ 1.39
RPO31P04051 YBR190WYBR190W 312 nt23.71■■□□□ 1.39
RPO31P04051 YDJ1YNL064C 1230 nt23.46■■□□□ 1.35
RPO31P04051 YKL097CYKL097C 411 nt23.43■■□□□ 1.34
RPO31P04051 SHR5YOL110W 714 nt23.31■■□□□ 1.32
RPO31P04051 GAR1YHR089C 618 nt23.11■■□□□ 1.29
RPO31P04051 SHU1YHL006C 453 nt22.85■■□□□ 1.25
RPO31P04051 DEP1YAL013W 1218 nt22.7■■□□□ 1.22
RPO31P04051 YAL037C-BYAL037C-B 975 nt22.4■■□□□ 1.18
RPO31P04051 YOR139CYOR139C 393 nt22.4■■□□□ 1.18
RPO31P04051 URN1YPR152C 1398 nt22.3■■□□□ 1.16
RPO31P04051 TIR1YER011W 765 nt22.2■■□□□ 1.14
RPO31P04051 YNL208WYNL208W 600 nt22.07■■□□□ 1.12
RPO31P04051 NPL3YDR432W 1245 nt22■■□□□ 1.11
RPO31P04051 RPN10YHR200W 807 nt21.96■■□□□ 1.11
RPO31P04051 SRB2YHR041C 633 nt21.87■■□□□ 1.09
RPO31P04051 SSA1YAL005C 1929 nt21.83■■□□□ 1.09
RPO31P04051 MNP1YGL068W 585 nt21.82■■□□□ 1.08
RPO31P04051 OPI9YLR338W 858 nt21.63■■□□□ 1.05
RPO31P04051 WWM1YFL010C 636 nt21.5■■□□□ 1.03
RPO31P04051 SAH1YER043C 1350 nt21.49■■□□□ 1.03
RPO31P04051 HOM6YJR139C 1080 nt21.46■■□□□ 1.03
RPO31P04051 YOL037CYOL037C 354 nt21.41■■□□□ 1.02
RPO31P04051 YGR021WYGR021W 873 nt21.39■■□□□ 1.01
RPO31P04051 tM(CAU)CtM(CAU)C 72 nt21.3■■□□□ 1
RPO31P04051 IMT4tM(CAU)E 72 nt21.3■■□□□ 1
RPO31P04051 IMT3tM(CAU)J3 72 nt21.3■■□□□ 1
RPO31P04051 IMT1tM(CAU)O1 72 nt21.3■■□□□ 1
RPO31P04051 IMT2tM(CAU)P 72 nt21.3■■□□□ 1
RPO31P04051 YJR120WYJR120W 351 nt21.26■□□□□ 0.99
RPO31P04051 YJR018WYJR018W 363 nt21.22■□□□□ 0.99
RPO31P04051 RKM5YLR137W 1104 nt21.17■□□□□ 0.98
RPO31P04051 PUT4YOR348C 1884 nt21.03■□□□□ 0.96
RPO31P04051 PUN1YLR414C 792 nt20.99■□□□□ 0.95
RPO31P04051 PUS2YGL063W 1113 nt20.98■□□□□ 0.95
RPO31P04051 ARE1YCR048W 1833 nt20.97■□□□□ 0.95
RPO31P04051 RPP2BYDR382W 333 nt20.94■□□□□ 0.94
RPO31P04051 MOT3YMR070W 1473 nt20.94■□□□□ 0.94
RPO31P04051 YFL021C-AYFL021C-A 855 nt20.93■□□□□ 0.94
RPO31P04051 YHR049C-AYHR049C-A 297 nt20.9■□□□□ 0.94
RPO31P04051 SSA3YBL075C 1950 nt20.78■□□□□ 0.92
RPO31P04051 YLR281CYLR281C 468 nt20.77■□□□□ 0.92
RPO31P04051 PTC2YER089C 1395 nt20.71■□□□□ 0.91
RPO31P04051 BDH2YAL061W 1254 nt20.69■□□□□ 0.9
RPO31P04051 WHI5YOR083W 888 nt20.69■□□□□ 0.9
RPO31P04051 BSC6YOL137W 1494 nt20.68■□□□□ 0.9
RPO31P04051 FMP45YDL222C 930 nt20.6■□□□□ 0.89
RPO31P04051 YLR236CYLR236C 324 nt20.54■□□□□ 0.88
RPO31P04051 POA1YBR022W 534 nt20.54■□□□□ 0.88
RPO31P04051 BUD23YCR047C 828 nt20.48■□□□□ 0.87
RPO31P04051 YPR011CYPR011C 981 nt20.46■□□□□ 0.87
RPO31P04051 YBL100CYBL100C 315 nt20.38■□□□□ 0.85
RPO31P04051 DSK2YMR276W 1122 nt20.37■□□□□ 0.85
RPO31P04051 FPR4YLR449W 1179 nt20.36■□□□□ 0.85
RPO31P04051 LSM3YLR438C-A 270 nt20.34■□□□□ 0.85
RPO31P04051 FIS1YIL065C 468 nt20.3■□□□□ 0.84
RPO31P04051 NAB2YGL122C 1578 nt20.2■□□□□ 0.82
RPO31P04051 YCH1YGR203W 447 nt20.2■□□□□ 0.82
RPO31P04051 DAL1YIR027C 1383 nt20.15■□□□□ 0.82
RPO31P04051 INM2YDR287W 879 nt20.12■□□□□ 0.81
RPO31P04051 PHO4YFR034C 939 nt20.12■□□□□ 0.81
RPO31P04051 YLR154C-GYLR154C-G 150 nt20.12■□□□□ 0.81
RPO31P04051 LPX1YOR084W 1164 nt20.1■□□□□ 0.81
RPO31P04051 FUN26YAL022C 1554 nt20.09■□□□□ 0.81
RPO31P04051 MRPL8YJL063C 717 nt20.08■□□□□ 0.81
RPO31P04051 SPP1YPL138C 1062 nt20.08■□□□□ 0.81
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms