RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 MTC1P47018 478 aaKnown RBP11.07□□□□□ -0.64
snR42snR42 FAP1P53971 965 aa10.64□□□□□ -0.71
snR42snR42 PRY3P47033 881 aa10.02□□□□□ -0.81
snR42snR42 AAD16Q02895 342 aa9.71□□□□□ -0.86
snR42snR42 DRS1P32892 752 aaKnown RBP9.69□□□□□ -0.86
snR42snR42 PRI1P10363 409 aa9.68□□□□□ -0.86
snR42snR42 YCK3P39962 524 aa9.42□□□□□ -0.9
snR42snR42 HAA1Q12753 694 aaKnown RBP9.42□□□□□ -0.9
snR42snR42 ISW2Q08773 1120 aa9.32□□□□□ -0.92
snR42snR42 RPG1P38249 964 aaKnown RBP9.21□□□□□ -0.94
snR42snR42 TSR3Q12094 313 aaKnown RBP9.09□□□□□ -0.95
snR42snR42 MRPL32P25348 183 aa8.78□□□□□ -1
snR42snR42 DIP2Q12220 943 aaPredicted RBP8.72□□□□□ -1.01
snR42snR42 RSE1Q04693 1361 aaKnown RBP8.63□□□□□ -1.03
snR42snR42 YGL015CP33199 130 aa8.61□□□□□ -1.03
snR42snR42 REB1P21538 810 aa8.41□□□□□ -1.06
snR42snR42 RPL17AP05740 184 aaKnown RBP8.38□□□□□ -1.07
snR42snR42 RPL17BP46990 184 aaKnown RBP8.38□□□□□ -1.07
snR42snR42 AVT3P36062 692 aa8.25□□□□□ -1.09
snR42snR42 CDC27P38042 758 aa8.18□□□□□ -1.1
snR42snR42 BUD31P25337 157 aaPredicted RBP8.16□□□□□ -1.1
snR42snR42 UBP10P53874 792 aaPredicted RBP8.1□□□□□ -1.11
snR42snR42 YKR023WP36119 530 aaKnown RBP8.03□□□□□ -1.12
snR42snR42 MAP2P38174 421 aaKnown RBP8.01□□□□□ -1.13
snR42snR42 SPT21P35209 758 aa7.98□□□□□ -1.13
snR42snR42 TFC8Q12308 588 aa7.87□□□□□ -1.15
snR42snR42 HOP09932 586 aa7.84□□□□□ -1.15
snR42snR42 DCD1P06773 312 aa7.8□□□□□ -1.16
snR42snR42 TIF4632P39936 914 aaKnown RBP7.77□□□□□ -1.17
snR42snR42 BFR2Q06631 534 aaKnown RBP7.76□□□□□ -1.17
snR42snR42 TGL3P40308 642 aa7.75□□□□□ -1.17
snR42snR42 SCY1P53009 804 aa7.74□□□□□ -1.17
snR42snR42 UBP9P39967 754 aa7.71□□□□□ -1.18
snR42snR42 SIS1P25294 352 aaKnown RBP7.7□□□□□ -1.18
snR42snR42 SLX5P32828 619 aaKnown RBP7.7□□□□□ -1.18
snR42snR42 RIM101P33400 625 aa7.58□□□□□ -1.2
snR42snR42 BCH2P36122 765 aa7.58□□□□□ -1.2
snR42snR42 MST1P07236 462 aa7.35□□□□□ -1.23
snR42snR42 EPS1P40557 701 aa7.35□□□□□ -1.23
snR42snR42 BDF1P35817 686 aa7.34□□□□□ -1.23
snR42snR42 YBL029C-AQ3E756 94 aa7.29□□□□□ -1.24
snR42snR42 YOR238WQ08634 303 aa7.28□□□□□ -1.24
snR42snR42 OXP1P28273 1286 aa7.27□□□□□ -1.25
snR42snR42 NSR1P27476 414 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
snR42snR42 PTP3P40048 928 aa7.2□□□□□ -1.26
snR42snR42 VNX1P42839 908 aa7.2□□□□□ -1.26
snR42snR42 YIL055CP40523 627 aaKnown RBP7.19□□□□□ -1.26
snR42snR42 YAP5P40574 245 aa7.15□□□□□ -1.26
snR42snR42 BBC1P47068 1157 aa7.14□□□□□ -1.27
snR42snR42 SPP1Q03012 353 aa7.14□□□□□ -1.27
snR42snR42 RSM7P47150 247 aa7.09□□□□□ -1.27
snR42snR42 AI2P03876 854 aa7.07□□□□□ -1.28
snR42snR42 WSC3Q12215 556 aa7.07□□□□□ -1.28
snR42snR42 AIR2Q12476 344 aaKnown RBP7.05□□□□□ -1.28
snR42snR42 TIF11P38912 153 aaKnown RBP7.04□□□□□ -1.28
snR42snR42 YJL171CP46992 396 aa7.04□□□□□ -1.28
snR42snR42 FKH1P40466 484 aa7.03□□□□□ -1.28
snR42snR42 GTT3P39996 337 aa7.01□□□□□ -1.29
snR42snR42 YAH1Q12184 172 aaKnown RBP6.95□□□□□ -1.3
snR42snR42 LDB19Q12502 818 aa6.92□□□□□ -1.3
snR42snR42 ULI1P43604 169 aa6.9□□□□□ -1.3
snR42snR42 IOC2Q12072 812 aa6.89□□□□□ -1.31
snR42snR42 BMT6Q12291 365 aa6.89□□□□□ -1.31
snR42snR42 YLR271WQ06152 274 aa6.84□□□□□ -1.31
snR42snR42 MSB4Q12317 492 aa6.84□□□□□ -1.31
snR42snR42 PSD2P53037 1138 aaKnown RBP6.83□□□□□ -1.32
snR42snR42 PIB1Q06651 286 aa6.83□□□□□ -1.32
snR42snR42 EAP1P36041 632 aaKnown RBP6.82□□□□□ -1.32
snR42snR42 MRM1P25270 412 aa6.77□□□□□ -1.33
snR42snR42 RTG1P32607 177 aa6.76□□□□□ -1.33
snR42snR42 YOL036WQ08206 761 aa6.74□□□□□ -1.33
snR42snR42 NCR1Q12200 1170 aa6.74□□□□□ -1.33
snR42snR42 TFA1P36100 482 aa6.73□□□□□ -1.33
snR42snR42 TRP5P00931 707 aaKnown RBP6.72□□□□□ -1.33
snR42snR42 SET4P42948 560 aa6.72□□□□□ -1.33
snR42snR42 SEC61P32915 480 aa6.7□□□□□ -1.34
snR42snR42 YNL035CP53962 389 aaKnown RBP6.7□□□□□ -1.34
snR42snR42 YMR1P47147 688 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
snR42snR42 DBP1P24784 617 aaKnown RBP6.66□□□□□ -1.34
snR42snR42 ARP8Q12386 881 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
snR42snR42 VPS29P38759 282 aa6.64□□□□□ -1.35
snR42snR42 VMA1P17255 1071 aaKnown RBP6.63□□□□□ -1.35
snR42snR42 SAM3Q08986 587 aa6.63□□□□□ -1.35
snR42snR42 TFG1P41895 735 aaPredicted RBP6.62□□□□□ -1.35
snR42snR42 SSP1P38871 571 aa6.61□□□□□ -1.35
snR42snR42 RTG3P38165 486 aa6.6□□□□□ -1.35
snR42snR42 YFR006WP43590 535 aa6.6□□□□□ -1.35
snR42snR42 STS1P38637 319 aa6.58□□□□□ -1.36
snR42snR42 JIP4Q03361 876 aa6.57□□□□□ -1.36
snR42snR42 ABP1P15891 592 aaKnown RBP6.56□□□□□ -1.36
snR42snR42 BCK2P33306 851 aa6.55□□□□□ -1.36
snR42snR42 SAP30P38429 201 aa6.55□□□□□ -1.36
snR42snR42 DAN4P47179 1161 aa6.55□□□□□ -1.36
snR42snR42 CST9Q06032 482 aa6.54□□□□□ -1.36
snR42snR42 CHL1P22516 861 aaPredicted RBP6.53□□□□□ -1.36
snR42snR42 MGA2P40578 1113 aa6.53□□□□□ -1.36
snR42snR42 YDL129WQ07555 291 aa6.53□□□□□ -1.36
snR42snR42 GYP5Q12344 894 aa6.5□□□□□ -1.37
snR42snR42 HTA1P04911 132 aaKnown RBP6.49□□□□□ -1.37
snR42snR42 HTA2P04912 132 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms