RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	TY1A-DR1	Q03856	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-ML1	Q04706	440 aa	Known RBP	8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-BR	Q12217	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-NL2	Q12470	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-GR2	Q12485	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	SEC2	P17065	759 aa		8.44	□□□□□ -1.06
RSA1	YPL193W	RGR1	P19263	1082 aa		8.44	□□□□□ -1.06
RSA1	YPL193W	CST6	P40535	587 aa		8.43	□□□□□ -1.06
RSA1	YPL193W	AIR1	P40507	360 aa	Known RBP	8.4	□□□□□ -1.06
RSA1	YPL193W	RRN7	P40992	514 aa		8.4	□□□□□ -1.06
RSA1	YPL193W	CLA4	P48562	842 aa		8.39	□□□□□ -1.07
RSA1	YPL193W	FRK1	Q03002	865 aa	Predicted RBP	8.39	□□□□□ -1.07
RSA1	YPL193W	PBS2	P08018	668 aa		8.38	□□□□□ -1.07
RSA1	YPL193W	KEX2	P13134	814 aa		8.36	□□□□□ -1.07
RSA1	YPL193W	RGA1	P39083	1007 aa		8.35	□□□□□ -1.07
RSA1	YPL193W	ERF2	Q06551	359 aa		8.35	□□□□□ -1.07
RSA1	YPL193W	LAM6	Q08001	693 aa		8.35	□□□□□ -1.07
RSA1	YPL193W	CKB1	P43639	278 aa		8.34	□□□□□ -1.07
RSA1	YPL193W	PAT1	P25644	796 aa	Known RBP	8.32	□□□□□ -1.08
RSA1	YPL193W	BDP1	P46678	594 aa		8.31	□□□□□ -1.08
RSA1	YPL193W	BRE2	P43132	505 aa		8.29	□□□□□ -1.08
RSA1	YPL193W	MAM3	Q12296	706 aa		8.28	□□□□□ -1.08
RSA1	YPL193W	PSE1	P32337	1089 aa	Known RBP	8.27	□□□□□ -1.09
RSA1	YPL193W	GCR2	Q01722	534 aa		8.25	□□□□□ -1.09
RSA1	YPL193W	DMA1	P38823	416 aa		8.24	□□□□□ -1.09
RSA1	YPL193W	GAR1	P28007	205 aa	Known RBP	8.23	□□□□□ -1.09
RSA1	YPL193W	PAC1	P39946	494 aa	Known RBP	8.23	□□□□□ -1.09
RSA1	YPL193W	IES2	P40154	320 aa		8.23	□□□□□ -1.09
RSA1	YPL193W	CDC4	P07834	779 aa		8.21	□□□□□ -1.1
RSA1	YPL193W	CLB5	P30283	435 aa		8.19	□□□□□ -1.1
RSA1	YPL193W	TUB4	P53378	473 aa		8.19	□□□□□ -1.1
RSA1	YPL193W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	8.18	□□□□□ -1.1	not detected
RSA1	YPL193W	HED1	Q03937	162 aa		8.18	□□□□□ -1.1
RSA1	YPL193W	DSF2	P38213	736 aa		8.17	□□□□□ -1.1
RSA1	YPL193W	AGE1	Q04412	482 aa		8.17	□□□□□ -1.1
RSA1	YPL193W	PUS5	Q06244	254 aa		8.17	□□□□□ -1.1
RSA1	YPL193W	SPB4	P25808	606 aa	Predicted RBP	8.15	□□□□□ -1.1
RSA1	YPL193W	TEA1	P47988	759 aa		8.15	□□□□□ -1.1
RSA1	YPL193W	YNL115C	P53925	644 aa		8.14	□□□□□ -1.11
RSA1	YPL193W	YPL062W	Q02781	134 aa		8.14	□□□□□ -1.11
RSA1	YPL193W	SAS10	Q12136	610 aa	Predicted RBP	8.14	□□□□□ -1.11
RSA1	YPL193W	MOD5	P07884	428 aa		8.13	□□□□□ -1.11
RSA1	YPL193W	NUP42	P49686	430 aa	Known RBP	8.13	□□□□□ -1.11
RSA1	YPL193W	RTF1	P53064	558 aa		8.11	□□□□□ -1.11
RSA1	YPL193W	NIS1	P53939	407 aa		8.11	□□□□□ -1.11
RSA1	YPL193W	DIT2	P21595	489 aa		8.1	□□□□□ -1.11
RSA1	YPL193W	MET32	Q12041	191 aa		8.1	□□□□□ -1.11
RSA1	YPL193W	ASH1	P34233	588 aa		8.09	□□□□□ -1.11
RSA1	YPL193W	SIT4	P20604	311 aa		8.07	□□□□□ -1.12
RSA1	YPL193W	MET22	P32179	357 aa		8.07	□□□□□ -1.12
RSA1	YPL193W	HST3	P53687	447 aa		8.06	□□□□□ -1.12
RSA1	YPL193W	SLY41	P22215	453 aa		8.04	□□□□□ -1.12
RSA1	YPL193W	KXD1	P53158	218 aa		8.04	□□□□□ -1.12
RSA1	YPL193W	FPK1	P53739	893 aa		8.03	□□□□□ -1.12
RSA1	YPL193W	YMR196W	Q04336	1088 aa		8.03	□□□□□ -1.12
RSA1	YPL193W	AFT1	P22149	690 aa		8.02	□□□□□ -1.13
RSA1	YPL193W	YDR444W	Q04093	687 aa		8.01	□□□□□ -1.13
RSA1	YPL193W	ENV9	Q08651	330 aa		8.01	□□□□□ -1.13
RSA1	YPL193W	HXT10	P43581	546 aa		7.99	□□□□□ -1.13
RSA1	YPL193W	PDC1	P06169	563 aa	Known RBP	7.98	□□□□□ -1.13
RSA1	YPL193W	SCJ1	P25303	377 aa		7.98	□□□□□ -1.13
RSA1	YPL193W	RRD1	P40454	393 aa	Known RBP	7.97	□□□□□ -1.13
RSA1	YPL193W	YJR115W	P47152	169 aa		7.96	□□□□□ -1.14
RSA1	YPL193W	TBF1	Q02457	562 aa		7.95	□□□□□ -1.14
RSA1	YPL193W	SYH1	Q02875	849 aa	Known RBP	7.95	□□□□□ -1.14
RSA1	YPL193W	YDL206W	Q12424	762 aa		7.94	□□□□□ -1.14
RSA1	YPL193W	TPD3	P31383	635 aa		7.93	□□□□□ -1.14
RSA1	YPL193W	LCB5	Q06147	687 aa	Known RBP	7.93	□□□□□ -1.14
RSA1	YPL193W	KIP2	P28743	706 aa		7.92	□□□□□ -1.14
RSA1	YPL193W	PUS6	P53294	404 aa		7.92	□□□□□ -1.14
RSA1	YPL193W	ALR1	Q08269	859 aa		7.91	□□□□□ -1.14
RSA1	YPL193W	TRM1	P15565	570 aa	Known RBP	7.9	□□□□□ -1.14
RSA1	YPL193W	ATF2	P53296	535 aa		7.9	□□□□□ -1.14
RSA1	YPL193W	RPA14	P50106	137 aa		7.89	□□□□□ -1.15
RSA1	YPL193W	UGA3	P26370	528 aa		7.88	□□□□□ -1.15
RSA1	YPL193W	HST2	P53686	357 aa		7.88	□□□□□ -1.15
RSA1	YPL193W	MMP1	Q12372	583 aa		7.88	□□□□□ -1.15
RSA1	YPL193W	IXR1	P33417	597 aa		7.86	□□□□□ -1.15
RSA1	YPL193W	YPR097W	Q06839	1073 aa		7.86	□□□□□ -1.15
RSA1	YPL193W	ESS1	P22696	170 aa		7.85	□□□□□ -1.15
RSA1	YPL193W	MSB3	P48566	633 aa	Predicted RBP	7.85	□□□□□ -1.15
RSA1	YPL193W	YDL176W	Q12027	708 aa		7.85	□□□□□ -1.15
RSA1	YPL193W	GLN1	P32288	370 aa	Known RBP	7.84	□□□□□ -1.15
RSA1	YPL193W	SRF1	Q12516	437 aa		7.84	□□□□□ -1.15
RSA1	YPL193W	GLC3	P32775	704 aa		7.83	□□□□□ -1.16
RSA1	YPL193W	TYW1	Q08960	810 aa	Known RBP	7.83	□□□□□ -1.16
RSA1	YPL193W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.82	□□□□□ -1.16	not detected
RSA1	YPL193W	YJU3	P28321	313 aa		7.81	□□□□□ -1.16
RSA1	YPL193W	PTK2	P47116	818 aa	Known RBP	7.81	□□□□□ -1.16
RSA1	YPL193W	CAF120	P53836	1060 aa		7.78	□□□□□ -1.16
RSA1	YPL193W	OPT2	Q06593	877 aa		7.77	□□□□□ -1.17
RSA1	YPL193W	MRT4	P33201	236 aa	Known RBP	7.76	□□□□□ -1.17
RSA1	YPL193W	YNR021W	P53723	404 aa	Known RBP	7.76	□□□□□ -1.17
RSA1	YPL193W	ITT1	Q04638	464 aa		7.75	□□□□□ -1.17
RSA1	YPL193W	YLR346C	Q06139	101 aa		7.74	□□□□□ -1.17
RSA1	YPL193W	PKH3	Q03306	898 aa	Predicted RBP	7.73	□□□□□ -1.17
RSA1	YPL193W	VAC17	P25591	423 aa		7.71	□□□□□ -1.18
RSA1	YPL193W	APP1	P53933	587 aa		7.71	□□□□□ -1.18
RSA1	YPL193W	ARG8	P18544	423 aa		7.7	□□□□□ -1.18
RSA1	YPL193W	KTR1	P27810	393 aa	Known RBP	7.7	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms