RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	MTC1	P47018	478 aa	Known RBP	16.46	■□□□□ 0.23
RSA1	YPL193W	FAP1	P53971	965 aa		15.3	■□□□□ 0.04
RSA1	YPL193W	DRS1	P32892	752 aa	Known RBP	15.13	■□□□□ 0.01
RSA1	YPL193W	PRY3	P47033	881 aa		14.37	□□□□□ -0.11
RSA1	YPL193W	PRI1	P10363	409 aa		14.05	□□□□□ -0.16
RSA1	YPL193W	AAD16	Q02895	342 aa		14.02	□□□□□ -0.17
RSA1	YPL193W	ISW2	Q08773	1120 aa		13.73	□□□□□ -0.21
RSA1	YPL193W	RPG1	P38249	964 aa	Known RBP	13.64	□□□□□ -0.23
RSA1	YPL193W	YCK3	P39962	524 aa		13.46	□□□□□ -0.25
RSA1	YPL193W	HAA1	Q12753	694 aa	Known RBP	13.37	□□□□□ -0.27
RSA1	YPL193W	DIP2	Q12220	943 aa	Predicted RBP	13.36	□□□□□ -0.27
RSA1	YPL193W	TSR3	Q12094	313 aa	Known RBP	13.34	□□□□□ -0.27
RSA1	YPL193W	RSE1	Q04693	1361 aa	Known RBP	12.98	□□□□□ -0.33
RSA1	YPL193W	MRPL32	P25348	183 aa		12.78	□□□□□ -0.36
RSA1	YPL193W	AVT3	P36062	692 aa		12.72	□□□□□ -0.37
RSA1	YPL193W	RPL17A	P05740	184 aa	Known RBP	12.63	□□□□□ -0.39
RSA1	YPL193W	RPL17B	P46990	184 aa	Known RBP	12.63	□□□□□ -0.39
RSA1	YPL193W	REB1	P21538	810 aa		12.61	□□□□□ -0.39
RSA1	YPL193W	BFR2	Q06631	534 aa	Known RBP	12.42	□□□□□ -0.42
RSA1	YPL193W	YGL015C	P33199	130 aa		12.31	□□□□□ -0.44
RSA1	YPL193W	CDC27	P38042	758 aa		12.09	□□□□□ -0.47
RSA1	YPL193W	SPT21	P35209	758 aa		11.97	□□□□□ -0.49
RSA1	YPL193W	YKR023W	P36119	530 aa	Known RBP	11.95	□□□□□ -0.5
RSA1	YPL193W	HO	P09932	586 aa		11.78	□□□□□ -0.52
RSA1	YPL193W	DCD1	P06773	312 aa		11.77	□□□□□ -0.53
RSA1	YPL193W	MAP2	P38174	421 aa	Known RBP	11.75	□□□□□ -0.53
RSA1	YPL193W	UBP10	P53874	792 aa	Predicted RBP	11.7	□□□□□ -0.54
RSA1	YPL193W	TFC8	Q12308	588 aa		11.7	□□□□□ -0.54
RSA1	YPL193W	RIM101	P33400	625 aa		11.49	□□□□□ -0.57
RSA1	YPL193W	SCY1	P53009	804 aa		11.48	□□□□□ -0.57
RSA1	YPL193W	BUD31	P25337	157 aa	Predicted RBP	11.45	□□□□□ -0.58
RSA1	YPL193W	BCH2	P36122	765 aa		11.33	□□□□□ -0.6
RSA1	YPL193W	SLX5	P32828	619 aa	Known RBP	11.32	□□□□□ -0.6
RSA1	YPL193W	TIF4632	P39936	914 aa	Known RBP	11.28	□□□□□ -0.6
RSA1	YPL193W	TGL3	P40308	642 aa		11.19	□□□□□ -0.62
RSA1	YPL193W	OXP1	P28273	1286 aa		11.13	□□□□□ -0.63
RSA1	YPL193W	PTP3	P40048	928 aa		11.04	□□□□□ -0.64
RSA1	YPL193W	EPS1	P40557	701 aa		11.03	□□□□□ -0.64
RSA1	YPL193W	YIL055C	P40523	627 aa	Known RBP	11.01	□□□□□ -0.65
RSA1	YPL193W	BDF1	P35817	686 aa		10.98	□□□□□ -0.65
RSA1	YPL193W	UBP9	P39967	754 aa		10.98	□□□□□ -0.65
RSA1	YPL193W	SIS1	P25294	352 aa	Known RBP	10.9	□□□□□ -0.66
RSA1	YPL193W	YAH1	Q12184	172 aa	Known RBP	10.86	□□□□□ -0.67
RSA1	YPL193W	RSM7	P47150	247 aa		10.81	□□□□□ -0.68
RSA1	YPL193W	BBC1	P47068	1157 aa		10.77	□□□□□ -0.69
RSA1	YPL193W	AI2	P03876	854 aa		10.75	□□□□□ -0.69
RSA1	YPL193W	YOR238W	Q08634	303 aa		10.68	□□□□□ -0.7
RSA1	YPL193W	MST1	P07236	462 aa		10.64	□□□□□ -0.71
RSA1	YPL193W	TFA1	P36100	482 aa		10.64	□□□□□ -0.71
RSA1	YPL193W	YBL029C-A	Q3E756	94 aa		10.64	□□□□□ -0.71
RSA1	YPL193W	YLR271W	Q06152	274 aa		10.57	□□□□□ -0.72
RSA1	YPL193W	YAP5	P40574	245 aa		10.55	□□□□□ -0.72
RSA1	YPL193W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	10.53	□□□□□ -0.72	not detected
RSA1	YPL193W	WSC3	Q12215	556 aa		10.48	□□□□□ -0.73
RSA1	YPL193W	VNX1	P42839	908 aa		10.47	□□□□□ -0.73
RSA1	YPL193W	PSD2	P53037	1138 aa	Known RBP	10.42	□□□□□ -0.74
RSA1	YPL193W	SPP1	Q03012	353 aa		10.41	□□□□□ -0.74
RSA1	YPL193W	GTT3	P39996	337 aa		10.38	□□□□□ -0.75
RSA1	YPL193W	PIB1	Q06651	286 aa		10.38	□□□□□ -0.75
RSA1	YPL193W	MRM1	P25270	412 aa		10.37	□□□□□ -0.75
RSA1	YPL193W	SSP1	P38871	571 aa		10.35	□□□□□ -0.75
RSA1	YPL193W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10.33	□□□□□ -0.76	not detected
RSA1	YPL193W	TIF11	P38912	153 aa	Known RBP	10.25	□□□□□ -0.77
RSA1	YPL193W	CST9	Q06032	482 aa		10.21	□□□□□ -0.77
RSA1	YPL193W	ULI1	P43604	169 aa		10.16	□□□□□ -0.78
RSA1	YPL193W	AIR2	Q12476	344 aa	Known RBP	10.15	□□□□□ -0.78
RSA1	YPL193W	YJL171C	P46992	396 aa		10.13	□□□□□ -0.79
RSA1	YPL193W	LDB19	Q12502	818 aa		10.13	□□□□□ -0.79
RSA1	YPL193W	FKH1	P40466	484 aa		10.12	□□□□□ -0.79
RSA1	YPL193W	MGA2	P40578	1113 aa		10.12	□□□□□ -0.79
RSA1	YPL193W	YFR006W	P43590	535 aa		10.11	□□□□□ -0.79
RSA1	YPL193W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	10.1	□□□□□ -0.79	not detected
RSA1	YPL193W	DBP1	P24784	617 aa	Known RBP	10.09	□□□□□ -0.79
RSA1	YPL193W	RTG3	P38165	486 aa		10.09	□□□□□ -0.79
RSA1	YPL193W	VPS29	P38759	282 aa		10.09	□□□□□ -0.79
RSA1	YPL193W	IOC2	Q12072	812 aa		10.07	□□□□□ -0.8
RSA1	YPL193W	SET4	P42948	560 aa		10.06	□□□□□ -0.8
RSA1	YPL193W	YOL036W	Q08206	761 aa		10.02	□□□□□ -0.81
RSA1	YPL193W	MSB4	Q12317	492 aa		10.02	□□□□□ -0.81
RSA1	YPL193W	STS1	P38637	319 aa		10.01	□□□□□ -0.81
RSA1	YPL193W	RCR1	P38212	213 aa		10	□□□□□ -0.81
RSA1	YPL193W	EAP1	P36041	632 aa	Known RBP	9.98	□□□□□ -0.81
RSA1	YPL193W	TRP5	P00931	707 aa	Known RBP	9.96	□□□□□ -0.82
RSA1	YPL193W	VMA1	P17255	1071 aa	Known RBP	9.96	□□□□□ -0.82
RSA1	YPL193W	BMT6	Q12291	365 aa		9.95	□□□□□ -0.82
RSA1	YPL193W	RTG1	P32607	177 aa		9.93	□□□□□ -0.82
RSA1	YPL193W	SAM3	Q08986	587 aa		9.86	□□□□□ -0.83
RSA1	YPL193W	NCR1	Q12200	1170 aa		9.86	□□□□□ -0.83
RSA1	YPL193W	YNL035C	P53962	389 aa	Known RBP	9.83	□□□□□ -0.84
RSA1	YPL193W	GYP5	Q12344	894 aa		9.78	□□□□□ -0.84
RSA1	YPL193W	SEC61	P32915	480 aa		9.77	□□□□□ -0.85
RSA1	YPL193W	DCW1	P36091	449 aa		9.75	□□□□□ -0.85
RSA1	YPL193W	TFG1	P41895	735 aa	Predicted RBP	9.74	□□□□□ -0.85
RSA1	YPL193W	HTA1	P04911	132 aa	Known RBP	9.7	□□□□□ -0.86
RSA1	YPL193W	HTA2	P04912	132 aa		9.7	□□□□□ -0.86
RSA1	YPL193W	ABP1	P15891	592 aa	Known RBP	9.68	□□□□□ -0.86
RSA1	YPL193W	SAP30	P38429	201 aa		9.68	□□□□□ -0.86
RSA1	YPL193W	DAN4	P47179	1161 aa		9.68	□□□□□ -0.86
RSA1	YPL193W	JIP4	Q03361	876 aa		9.67	□□□□□ -0.86
RSA1	YPL193W	MIF2	P35201	549 aa		9.64	□□□□□ -0.87

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms