RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C TY1A-MR2P0CX69 440 aa9.47□□□□□ -0.89
VPS20YMR077C TY1A-JR2P47099 440 aa9.47□□□□□ -0.89
VPS20YMR077C TY1A-DR1Q03856 440 aa9.47□□□□□ -0.89
VPS20YMR077C TY1A-ML1Q04706 440 aaKnown RBP9.47□□□□□ -0.89
VPS20YMR077C TY1A-BRQ12217 440 aa9.47□□□□□ -0.89
VPS20YMR077C TY1A-NL2Q12470 440 aa9.47□□□□□ -0.89
VPS20YMR077C TY1A-GR2Q12485 440 aa9.47□□□□□ -0.89
VPS20YMR077C SEC2P17065 759 aa9.46□□□□□ -0.9
VPS20YMR077C PAT1P25644 796 aaKnown RBP9.46□□□□□ -0.9
VPS20YMR077C PSE1P32337 1089 aaKnown RBP9.44□□□□□ -0.9
VPS20YMR077C CST6P40535 587 aa9.41□□□□□ -0.9
VPS20YMR077C CLB5P30283 435 aa9.4□□□□□ -0.9
VPS20YMR077C LAM6Q08001 693 aa9.4□□□□□ -0.9
VPS20YMR077C RRN7P40992 514 aa9.39□□□□□ -0.91
VPS20YMR077C MAM3Q12296 706 aa9.39□□□□□ -0.91
VPS20YMR077C RGA1P39083 1007 aa9.38□□□□□ -0.91
VPS20YMR077C SAS10Q12136 610 aaPredicted RBP9.36□□□□□ -0.91
VPS20YMR077C GCR2Q01722 534 aa9.35□□□□□ -0.91
VPS20YMR077C FRK1Q03002 865 aaPredicted RBP9.34□□□□□ -0.91
VPS20YMR077C KEX2P13134 814 aa9.33□□□□□ -0.92
VPS20YMR077C DSF2P38213 736 aa9.33□□□□□ -0.92
VPS20YMR077C BRE2P43132 505 aa9.33□□□□□ -0.92
VPS20YMR077C AIR1P40507 360 aaKnown RBP9.32□□□□□ -0.92
VPS20YMR077C BDP1P46678 594 aa9.31□□□□□ -0.92
VPS20YMR077C CDC4P07834 779 aa9.3□□□□□ -0.92
VPS20YMR077C CLA4P48562 842 aa9.3□□□□□ -0.92
VPS20YMR077C DMA1P38823 416 aa9.29□□□□□ -0.92
VPS20YMR077C RTF1P53064 558 aa9.29□□□□□ -0.92
VPS20YMR077C ERF2Q06551 359 aa9.29□□□□□ -0.92
VPS20YMR077C HED1Q03937 162 aa9.28□□□□□ -0.92
VPS20YMR077C IES2P40154 320 aa9.27□□□□□ -0.93
VPS20YMR077C RGA2Q06407 1009 aa9.27□□□□□ -0.93
VPS20YMR077C YNL115CP53925 644 aa9.24□□□□□ -0.93
VPS20YMR077C TEA1P47988 759 aa9.23□□□□□ -0.93
VPS20YMR077C MOD5P07884 428 aa9.22□□□□□ -0.93
VPS20YMR077C PAC1P39946 494 aaKnown RBP9.22□□□□□ -0.93
VPS20YMR077C NUP42P49686 430 aaKnown RBP9.22□□□□□ -0.93
VPS20YMR077C SPB4P25808 606 aaPredicted RBP9.21□□□□□ -0.94
VPS20YMR077C TUB4P53378 473 aa9.21□□□□□ -0.94
VPS20YMR077C AGE1Q04412 482 aa9.21□□□□□ -0.94
VPS20YMR077C SIT4P20604 311 aa9.2□□□□□ -0.94
VPS20YMR077C YPL062WQ02781 134 aa9.17□□□□□ -0.94
VPS20YMR077C NIS1P53939 407 aa9.14□□□□□ -0.95
VPS20YMR077C GBP2P25555 427 aaKnown RBP RIP-Chip data9.13□□□□□ -0.95not detected
VPS20YMR077C GAR1P28007 205 aaKnown RBP9.13□□□□□ -0.95
VPS20YMR077C KXD1P53158 218 aa9.13□□□□□ -0.95
VPS20YMR077C DIT2P21595 489 aa9.11□□□□□ -0.95
VPS20YMR077C AFT1P22149 690 aa9.1□□□□□ -0.95
VPS20YMR077C TPD3P31383 635 aa9.1□□□□□ -0.95
VPS20YMR077C ASH1P34233 588 aa9.09□□□□□ -0.95
VPS20YMR077C HST3P53687 447 aa9.09□□□□□ -0.95
VPS20YMR077C MET32Q12041 191 aa9.09□□□□□ -0.95
VPS20YMR077C YMR196WQ04336 1088 aa9.08□□□□□ -0.96
VPS20YMR077C PUS5Q06244 254 aa9.08□□□□□ -0.96
VPS20YMR077C ENV9Q08651 330 aa9.08□□□□□ -0.96
VPS20YMR077C MET22P32179 357 aa9.07□□□□□ -0.96
VPS20YMR077C FPK1P53739 893 aa9.06□□□□□ -0.96
VPS20YMR077C SLY41P22215 453 aa9.05□□□□□ -0.96
VPS20YMR077C HXT10P43581 546 aa9.05□□□□□ -0.96
VPS20YMR077C RRD1P40454 393 aaKnown RBP9.03□□□□□ -0.96
VPS20YMR077C SYH1Q02875 849 aaKnown RBP9.02□□□□□ -0.97
VPS20YMR077C YDR444WQ04093 687 aa9.02□□□□□ -0.97
VPS20YMR077C PDC1P06169 563 aaKnown RBP9.01□□□□□ -0.97
VPS20YMR077C PUS6P53294 404 aa9□□□□□ -0.97
VPS20YMR077C RPA14P50106 137 aa8.99□□□□□ -0.97
VPS20YMR077C TBF1Q02457 562 aa8.99□□□□□ -0.97
VPS20YMR077C HST2P53686 357 aa8.98□□□□□ -0.97
VPS20YMR077C ALR1Q08269 859 aa8.98□□□□□ -0.97
VPS20YMR077C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.97□□□□□ -0.97not detected
VPS20YMR077C LCB5Q06147 687 aaKnown RBP8.97□□□□□ -0.97
VPS20YMR077C ATF2P53296 535 aa8.96□□□□□ -0.98
VPS20YMR077C YPR097WQ06839 1073 aa8.96□□□□□ -0.98
VPS20YMR077C MSB3P48566 633 aaPredicted RBP8.95□□□□□ -0.98
VPS20YMR077C YJR115WP47152 169 aa8.94□□□□□ -0.98
VPS20YMR077C YDL206WQ12424 762 aa8.94□□□□□ -0.98
VPS20YMR077C MMP1Q12372 583 aa8.93□□□□□ -0.98
VPS20YMR077C KIP2P28743 706 aa8.91□□□□□ -0.98
VPS20YMR077C YNR021WP53723 404 aaKnown RBP8.91□□□□□ -0.98
VPS20YMR077C TRM1P15565 570 aaKnown RBP8.9□□□□□ -0.98
VPS20YMR077C GLN1P32288 370 aaKnown RBP8.9□□□□□ -0.98
VPS20YMR077C SCJ1P25303 377 aa8.89□□□□□ -0.99
VPS20YMR077C RTT106P40161 455 aa8.89□□□□□ -0.99
VPS20YMR077C UGA3P26370 528 aa8.88□□□□□ -0.99
VPS20YMR077C IXR1P33417 597 aa8.87□□□□□ -0.99
VPS20YMR077C MRT4P33201 236 aaKnown RBP8.85□□□□□ -0.99
VPS20YMR077C SRF1Q12516 437 aa8.84□□□□□ -0.99
VPS20YMR077C YDL176WQ12027 708 aa8.83□□□□□ -1
VPS20YMR077C GLC3P32775 704 aa8.82□□□□□ -1
VPS20YMR077C PTK2P47116 818 aaKnown RBP8.82□□□□□ -1
VPS20YMR077C YLR346CQ06139 101 aa8.82□□□□□ -1
VPS20YMR077C ESS1P22696 170 aa8.81□□□□□ -1
VPS20YMR077C AIM7Q12156 149 aa8.8□□□□□ -1
VPS20YMR077C VAC17P25591 423 aa8.77□□□□□ -1.01
VPS20YMR077C NUP85P46673 744 aa8.77□□□□□ -1.01
VPS20YMR077C YJU3P28321 313 aa8.75□□□□□ -1.01
VPS20YMR077C OPT2Q06593 877 aa8.75□□□□□ -1.01
VPS20YMR077C RSC30P38781 883 aa8.74□□□□□ -1.01
VPS20YMR077C ACO2P39533 789 aa8.74□□□□□ -1.01
VPS20YMR077C TYW1Q08960 810 aaKnown RBP8.74□□□□□ -1.01
VPS20YMR077C GLY1P37303 387 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms