RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C MTC1P47018 478 aaKnown RBP18.33■□□□□ 0.52
VPS20YMR077C DRS1P32892 752 aaKnown RBP16.86■□□□□ 0.29
VPS20YMR077C FAP1P53971 965 aa16.76■□□□□ 0.27
VPS20YMR077C PRY3P47033 881 aa15.74■□□□□ 0.11
VPS20YMR077C PRI1P10363 409 aa15.59■□□□□ 0.09
VPS20YMR077C AAD16Q02895 342 aa15.55■□□□□ 0.08
VPS20YMR077C ISW2Q08773 1120 aa15.3■□□□□ 0.04
VPS20YMR077C RPG1P38249 964 aaKnown RBP15.08■□□□□ 0
VPS20YMR077C DIP2Q12220 943 aaPredicted RBP14.88□□□□□ -0.03
VPS20YMR077C HAA1Q12753 694 aaKnown RBP14.84□□□□□ -0.03
VPS20YMR077C YCK3P39962 524 aa14.76□□□□□ -0.05
VPS20YMR077C TSR3Q12094 313 aaKnown RBP14.67□□□□□ -0.06
VPS20YMR077C RSE1Q04693 1361 aaKnown RBP14.48□□□□□ -0.09
VPS20YMR077C AVT3P36062 692 aa14.26□□□□□ -0.13
VPS20YMR077C MRPL32P25348 183 aa14.19□□□□□ -0.14
VPS20YMR077C RPL17AP05740 184 aaKnown RBP14□□□□□ -0.17
VPS20YMR077C REB1P21538 810 aa14□□□□□ -0.17
VPS20YMR077C RPL17BP46990 184 aaKnown RBP14□□□□□ -0.17
VPS20YMR077C BFR2Q06631 534 aaKnown RBP13.91□□□□□ -0.18
VPS20YMR077C YGL015CP33199 130 aa13.7□□□□□ -0.22
VPS20YMR077C SPT21P35209 758 aa13.37□□□□□ -0.27
VPS20YMR077C CDC27P38042 758 aa13.33□□□□□ -0.28
VPS20YMR077C YKR023WP36119 530 aaKnown RBP13.26□□□□□ -0.29
VPS20YMR077C UBP10P53874 792 aaPredicted RBP13.12□□□□□ -0.31
VPS20YMR077C TFC8Q12308 588 aa13.02□□□□□ -0.33
VPS20YMR077C HOP09932 586 aa12.97□□□□□ -0.33
VPS20YMR077C MAP2P38174 421 aaKnown RBP12.97□□□□□ -0.33
VPS20YMR077C DCD1P06773 312 aa12.88□□□□□ -0.35
VPS20YMR077C RIM101P33400 625 aa12.88□□□□□ -0.35
VPS20YMR077C SCY1P53009 804 aa12.68□□□□□ -0.38
VPS20YMR077C BUD31P25337 157 aaPredicted RBP12.63□□□□□ -0.39
VPS20YMR077C TIF4632P39936 914 aaKnown RBP12.61□□□□□ -0.39
VPS20YMR077C SLX5P32828 619 aaKnown RBP12.59□□□□□ -0.39
VPS20YMR077C BCH2P36122 765 aa12.57□□□□□ -0.4
VPS20YMR077C TGL3P40308 642 aa12.53□□□□□ -0.4
VPS20YMR077C OXP1P28273 1286 aa12.38□□□□□ -0.43
VPS20YMR077C YIL055CP40523 627 aaKnown RBP12.3□□□□□ -0.44
VPS20YMR077C UBP9P39967 754 aa12.27□□□□□ -0.45
VPS20YMR077C PTP3P40048 928 aa12.26□□□□□ -0.45
VPS20YMR077C EPS1P40557 701 aa12.25□□□□□ -0.45
VPS20YMR077C BDF1P35817 686 aa12.21□□□□□ -0.45
VPS20YMR077C TFA1P36100 482 aa12.21□□□□□ -0.45
VPS20YMR077C RSM7P47150 247 aa12.09□□□□□ -0.47
VPS20YMR077C BBC1P47068 1157 aa12.07□□□□□ -0.48
VPS20YMR077C SIS1P25294 352 aaKnown RBP12.01□□□□□ -0.49
VPS20YMR077C YAH1Q12184 172 aaKnown RBP11.99□□□□□ -0.49
VPS20YMR077C AI2P03876 854 aa11.98□□□□□ -0.49
VPS20YMR077C MST1P07236 462 aa11.97□□□□□ -0.49
VPS20YMR077C NSR1P27476 414 aaKnown RBP RIP-Chip data11.94□□□□□ -0.5not detected
VPS20YMR077C YOR238WQ08634 303 aa11.93□□□□□ -0.5
VPS20YMR077C YAP5P40574 245 aa11.82□□□□□ -0.52
VPS20YMR077C YLR271WQ06152 274 aa11.8□□□□□ -0.52
VPS20YMR077C YBL029C-AQ3E756 94 aa11.74□□□□□ -0.53
VPS20YMR077C PSD2P53037 1138 aaKnown RBP11.68□□□□□ -0.54
VPS20YMR077C VNX1P42839 908 aa11.65□□□□□ -0.54
VPS20YMR077C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.65□□□□□ -0.54not detected
VPS20YMR077C SSP1P38871 571 aa11.63□□□□□ -0.55
VPS20YMR077C GTT3P39996 337 aa11.56□□□□□ -0.56
VPS20YMR077C SPP1Q03012 353 aa11.56□□□□□ -0.56
VPS20YMR077C WSC3Q12215 556 aa11.54□□□□□ -0.56
VPS20YMR077C MRM1P25270 412 aa11.52□□□□□ -0.57
VPS20YMR077C TIF11P38912 153 aaKnown RBP11.46□□□□□ -0.57
VPS20YMR077C MGA2P40578 1113 aa11.41□□□□□ -0.58
VPS20YMR077C PIB1Q06651 286 aa11.38□□□□□ -0.59
VPS20YMR077C CST9Q06032 482 aa11.34□□□□□ -0.59
VPS20YMR077C YMR1P47147 688 aaKnown RBP RIP-Chip data11.33□□□□□ -0.6not detected
VPS20YMR077C RTG3P38165 486 aa11.31□□□□□ -0.6
VPS20YMR077C MSB4Q12317 492 aa11.31□□□□□ -0.6
VPS20YMR077C FKH1P40466 484 aa11.3□□□□□ -0.6
VPS20YMR077C ULI1P43604 169 aa11.3□□□□□ -0.6
VPS20YMR077C AIR2Q12476 344 aaKnown RBP11.29□□□□□ -0.6
VPS20YMR077C VPS29P38759 282 aa11.27□□□□□ -0.61
VPS20YMR077C YJL171CP46992 396 aa11.27□□□□□ -0.61
VPS20YMR077C EAP1P36041 632 aaKnown RBP11.26□□□□□ -0.61
VPS20YMR077C DBP1P24784 617 aaKnown RBP11.25□□□□□ -0.61
VPS20YMR077C IOC2Q12072 812 aa11.25□□□□□ -0.61
VPS20YMR077C LDB19Q12502 818 aa11.25□□□□□ -0.61
VPS20YMR077C YOL036WQ08206 761 aa11.18□□□□□ -0.62
VPS20YMR077C STS1P38637 319 aa11.15□□□□□ -0.62
VPS20YMR077C SET4P42948 560 aa11.15□□□□□ -0.62
VPS20YMR077C YFR006WP43590 535 aa11.15□□□□□ -0.62
VPS20YMR077C VMA1P17255 1071 aaKnown RBP11.14□□□□□ -0.63
VPS20YMR077C SAM3Q08986 587 aa11.12□□□□□ -0.63
VPS20YMR077C BMT6Q12291 365 aa11.1□□□□□ -0.63
VPS20YMR077C TRP5P00931 707 aaKnown RBP11.09□□□□□ -0.63
VPS20YMR077C RCR1P38212 213 aa11.07□□□□□ -0.64
VPS20YMR077C RTG1P32607 177 aa11.05□□□□□ -0.64
VPS20YMR077C YNL035CP53962 389 aaKnown RBP11.03□□□□□ -0.64
VPS20YMR077C ABP1P15891 592 aaKnown RBP11.02□□□□□ -0.65
VPS20YMR077C NCR1Q12200 1170 aa11.02□□□□□ -0.65
VPS20YMR077C SEC61P32915 480 aa11.01□□□□□ -0.65
VPS20YMR077C GYP5Q12344 894 aa10.94□□□□□ -0.66
VPS20YMR077C JIP4Q03361 876 aa10.93□□□□□ -0.66
VPS20YMR077C TFG1P41895 735 aaPredicted RBP10.92□□□□□ -0.66
VPS20YMR077C HTA1P04911 132 aaKnown RBP10.88□□□□□ -0.67
VPS20YMR077C HTA2P04912 132 aa10.88□□□□□ -0.67
VPS20YMR077C DAN4P47179 1161 aa10.85□□□□□ -0.67
VPS20YMR077C DCW1P36091 449 aa10.82□□□□□ -0.68
VPS20YMR077C MAK11P20484 414 aaKnown RBP10.8□□□□□ -0.68
VPS20YMR077C PTC4P38089 393 aa10.8□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms