RNA–Protein interactions for RNA: YLR298C

YHC1, Transcript of Component of the U1 snRNP complex required for pre-mRNA splicing, yeastyeast

Gene YHC1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHC1YLR298C RGR1P19263 1082 aa7.86□□□□□ -1.15
YHC1YLR298C SEC2P17065 759 aa7.85□□□□□ -1.15
YHC1YLR298C YPR109WQ06104 294 aa7.84□□□□□ -1.15
YHC1YLR298C GCD11P32481 527 aaKnown RBP7.83□□□□□ -1.16
YHC1YLR298C ERG12P07277 443 aa7.82□□□□□ -1.16
YHC1YLR298C CST6P40535 587 aa7.82□□□□□ -1.16
YHC1YLR298C CKB1P43639 278 aa7.81□□□□□ -1.16
YHC1YLR298C PBS2P08018 668 aa7.8□□□□□ -1.16
YHC1YLR298C SPT16P32558 1035 aaKnown RBP7.78□□□□□ -1.16
YHC1YLR298C LAM6Q08001 693 aa7.77□□□□□ -1.17
YHC1YLR298C AIR1P40507 360 aaKnown RBP7.76□□□□□ -1.17
YHC1YLR298C RRN7P40992 514 aa7.76□□□□□ -1.17
YHC1YLR298C CLA4P48562 842 aa7.76□□□□□ -1.17
YHC1YLR298C KEX2P13134 814 aa7.74□□□□□ -1.17
YHC1YLR298C PSE1P32337 1089 aaKnown RBP7.74□□□□□ -1.17
YHC1YLR298C ERF2Q06551 359 aa7.74□□□□□ -1.17
YHC1YLR298C RGA1P39083 1007 aa7.73□□□□□ -1.17
YHC1YLR298C FRK1Q03002 865 aaPredicted RBP7.72□□□□□ -1.17
YHC1YLR298C MAM3Q12296 706 aa7.71□□□□□ -1.18
YHC1YLR298C BDP1P46678 594 aa7.7□□□□□ -1.18
YHC1YLR298C SAS10Q12136 610 aaPredicted RBP7.7□□□□□ -1.18
YHC1YLR298C PAT1P25644 796 aaKnown RBP7.69□□□□□ -1.18
YHC1YLR298C DMA1P38823 416 aa7.69□□□□□ -1.18
YHC1YLR298C DSF2P38213 736 aa7.68□□□□□ -1.18
YHC1YLR298C IES2P40154 320 aa7.67□□□□□ -1.18
YHC1YLR298C BRE2P43132 505 aa7.67□□□□□ -1.18
YHC1YLR298C CLB5P30283 435 aa7.66□□□□□ -1.18
YHC1YLR298C PAC1P39946 494 aaKnown RBP7.65□□□□□ -1.18
YHC1YLR298C RGA2Q06407 1009 aa7.65□□□□□ -1.18
YHC1YLR298C AGE1Q04412 482 aa7.64□□□□□ -1.19
YHC1YLR298C CDC4P07834 779 aa7.63□□□□□ -1.19
YHC1YLR298C NUP42P49686 430 aaKnown RBP7.62□□□□□ -1.19
YHC1YLR298C MOD5P07884 428 aa7.6□□□□□ -1.19
YHC1YLR298C RTF1P53064 558 aa7.6□□□□□ -1.19
YHC1YLR298C TUB4P53378 473 aa7.6□□□□□ -1.19
YHC1YLR298C HED1Q03937 162 aa7.6□□□□□ -1.19
YHC1YLR298C GCR2Q01722 534 aa7.58□□□□□ -1.2
YHC1YLR298C SIT4P20604 311 aa7.57□□□□□ -1.2
YHC1YLR298C YNL115CP53925 644 aa7.57□□□□□ -1.2
YHC1YLR298C TEA1P47988 759 aa7.56□□□□□ -1.2
YHC1YLR298C DIT2P21595 489 aa7.55□□□□□ -1.2
YHC1YLR298C NIS1P53939 407 aa7.55□□□□□ -1.2
YHC1YLR298C SPB4P25808 606 aaPredicted RBP7.53□□□□□ -1.2
YHC1YLR298C YPL062WQ02781 134 aa7.53□□□□□ -1.2
YHC1YLR298C PUS5Q06244 254 aa7.53□□□□□ -1.2
YHC1YLR298C MET32Q12041 191 aa7.52□□□□□ -1.21
YHC1YLR298C GAR1P28007 205 aaKnown RBP7.51□□□□□ -1.21
YHC1YLR298C MET22P32179 357 aa7.47□□□□□ -1.21
YHC1YLR298C ASH1P34233 588 aa7.47□□□□□ -1.21
YHC1YLR298C FPK1P53739 893 aa7.47□□□□□ -1.21
YHC1YLR298C AFT1P22149 690 aa7.46□□□□□ -1.22
YHC1YLR298C TPD3P31383 635 aa7.45□□□□□ -1.22
YHC1YLR298C RRD1P40454 393 aaKnown RBP7.45□□□□□ -1.22
YHC1YLR298C KXD1P53158 218 aa7.45□□□□□ -1.22
YHC1YLR298C ENV9Q08651 330 aa7.45□□□□□ -1.22
YHC1YLR298C PDC1P06169 563 aaKnown RBP7.44□□□□□ -1.22
YHC1YLR298C SLY41P22215 453 aa7.44□□□□□ -1.22
YHC1YLR298C GBP2P25555 427 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
YHC1YLR298C YMR196WQ04336 1088 aa7.44□□□□□ -1.22
YHC1YLR298C HXT10P43581 546 aa7.43□□□□□ -1.22
YHC1YLR298C HST3P53687 447 aa7.43□□□□□ -1.22
YHC1YLR298C SCJ1P25303 377 aa7.39□□□□□ -1.23
YHC1YLR298C YDR444WQ04093 687 aa7.39□□□□□ -1.23
YHC1YLR298C HST2P53686 357 aa7.38□□□□□ -1.23
YHC1YLR298C YDL206WQ12424 762 aa7.38□□□□□ -1.23
YHC1YLR298C SYH1Q02875 849 aaKnown RBP7.37□□□□□ -1.23
YHC1YLR298C YJR115WP47152 169 aa7.36□□□□□ -1.23
YHC1YLR298C RPA14P50106 137 aa7.36□□□□□ -1.23
YHC1YLR298C PUS6P53294 404 aa7.36□□□□□ -1.23
YHC1YLR298C TBF1Q02457 562 aa7.36□□□□□ -1.23
YHC1YLR298C LCB5Q06147 687 aaKnown RBP7.36□□□□□ -1.23
YHC1YLR298C TRM1P15565 570 aaKnown RBP7.35□□□□□ -1.23
YHC1YLR298C ALR1Q08269 859 aa7.35□□□□□ -1.23
YHC1YLR298C YPR097WQ06839 1073 aa7.34□□□□□ -1.23
YHC1YLR298C MSB3P48566 633 aaPredicted RBP7.33□□□□□ -1.24
YHC1YLR298C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
YHC1YLR298C ATF2P53296 535 aa7.32□□□□□ -1.24
YHC1YLR298C MMP1Q12372 583 aa7.32□□□□□ -1.24
YHC1YLR298C GLC3P32775 704 aa7.31□□□□□ -1.24
YHC1YLR298C YDL176WQ12027 708 aa7.31□□□□□ -1.24
YHC1YLR298C KIP2P28743 706 aa7.3□□□□□ -1.24
YHC1YLR298C YNR021WP53723 404 aaKnown RBP7.3□□□□□ -1.24
YHC1YLR298C ESS1P22696 170 aa7.29□□□□□ -1.24
YHC1YLR298C GLN1P32288 370 aaKnown RBP7.29□□□□□ -1.24
YHC1YLR298C IXR1P33417 597 aa7.27□□□□□ -1.25
YHC1YLR298C UGA3P26370 528 aa7.26□□□□□ -1.25
YHC1YLR298C YJU3P28321 313 aa7.26□□□□□ -1.25
YHC1YLR298C MRT4P33201 236 aaKnown RBP7.26□□□□□ -1.25
YHC1YLR298C TYW1Q08960 810 aaKnown RBP7.26□□□□□ -1.25
YHC1YLR298C PTK2P47116 818 aaKnown RBP7.25□□□□□ -1.25
YHC1YLR298C KTR1P27810 393 aaKnown RBP7.22□□□□□ -1.25
YHC1YLR298C VAC17P25591 423 aa7.21□□□□□ -1.26
YHC1YLR298C RSC30P38781 883 aa7.21□□□□□ -1.26
YHC1YLR298C SRF1Q12516 437 aa7.21□□□□□ -1.26
YHC1YLR298C OPT2Q06593 877 aa7.2□□□□□ -1.26
YHC1YLR298C CAF120P53836 1060 aa7.18□□□□□ -1.26
YHC1YLR298C PKH3Q03306 898 aaPredicted RBP7.18□□□□□ -1.26
YHC1YLR298C AIM7Q12156 149 aa7.18□□□□□ -1.26
YHC1YLR298C ACO2P39533 789 aa7.16□□□□□ -1.26
YHC1YLR298C RTT106P40161 455 aa7.16□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms