RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C DMA1P38823 416 aa6.85□□□□□ -1.31
SDO1YLR022C TFB4Q12004 338 aa6.85□□□□□ -1.31
SDO1YLR022C LAM6Q08001 693 aa6.84□□□□□ -1.31
SDO1YLR022C COX6P00427 148 aa6.8□□□□□ -1.32
SDO1YLR022C NPL4P33755 580 aa6.8□□□□□ -1.32
SDO1YLR022C YDR444WQ04093 687 aa6.8□□□□□ -1.32
SDO1YLR022C GCD11P32481 527 aaKnown RBP6.79□□□□□ -1.32
SDO1YLR022C MVP1P40959 511 aaKnown RBP6.79□□□□□ -1.32
SDO1YLR022C TY1A-DR4O74302 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-HP0C2I4 478 aaKnown RBP6.78□□□□□ -1.32
SDO1YLR022C TY1A-AP0CX57 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-PR1P0CX58 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-ORP0CX59 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-PR2P0CX60 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-DR5P0CX65 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-ER2P0CX66 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-GR3P0CX67 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-LR1P0CX68 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-MR2P0CX69 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-JR2P47099 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-DR1Q03856 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-ML1Q04706 440 aaKnown RBP6.78□□□□□ -1.32
SDO1YLR022C YDL176WQ12027 708 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-BRQ12217 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-NL2Q12470 440 aa6.78□□□□□ -1.32
SDO1YLR022C TY1A-GR2Q12485 440 aa6.78□□□□□ -1.32
SDO1YLR022C SEC2P17065 759 aa6.77□□□□□ -1.33
SDO1YLR022C MAK21Q12176 1025 aaKnown RBP6.77□□□□□ -1.33
SDO1YLR022C YPR109WQ06104 294 aa6.76□□□□□ -1.33
SDO1YLR022C RGR1P19263 1082 aa6.74□□□□□ -1.33
SDO1YLR022C MTC5Q03897 1148 aa6.74□□□□□ -1.33
SDO1YLR022C LCB5Q06147 687 aaKnown RBP6.74□□□□□ -1.33
SDO1YLR022C SAS10Q12136 610 aaPredicted RBP6.74□□□□□ -1.33
SDO1YLR022C SPT16P32558 1035 aaKnown RBP6.73□□□□□ -1.33
SDO1YLR022C RQC2Q12532 1038 aaKnown RBP6.73□□□□□ -1.33
SDO1YLR022C RRN7P40992 514 aa6.72□□□□□ -1.33
SDO1YLR022C FRK1Q03002 865 aaPredicted RBP6.72□□□□□ -1.33
SDO1YLR022C PBS2P08018 668 aa6.7□□□□□ -1.34
SDO1YLR022C HED1Q03937 162 aa6.7□□□□□ -1.34
SDO1YLR022C KEX2P13134 814 aa6.69□□□□□ -1.34
SDO1YLR022C ERF2Q06551 359 aa6.69□□□□□ -1.34
SDO1YLR022C BDP1P46678 594 aa6.68□□□□□ -1.34
SDO1YLR022C CKB1P43639 278 aa6.67□□□□□ -1.34
SDO1YLR022C ECM5Q03214 1411 aa6.65□□□□□ -1.35
SDO1YLR022C PAT1P25644 796 aaKnown RBP6.62□□□□□ -1.35
SDO1YLR022C MAM3Q12296 706 aa6.61□□□□□ -1.35
SDO1YLR022C PSE1P32337 1089 aaKnown RBP6.6□□□□□ -1.35
SDO1YLR022C ASH1P34233 588 aa6.6□□□□□ -1.35
SDO1YLR022C PAC1P39946 494 aaKnown RBP6.6□□□□□ -1.35
SDO1YLR022C IES2P40154 320 aa6.6□□□□□ -1.35
SDO1YLR022C AFT1P22149 690 aa6.59□□□□□ -1.35
SDO1YLR022C RRD1P40454 393 aaKnown RBP6.59□□□□□ -1.35
SDO1YLR022C MET32Q12041 191 aa6.57□□□□□ -1.36
SDO1YLR022C SPT6P23615 1451 aaKnown RBP6.57□□□□□ -1.36
SDO1YLR022C DSF2P38213 736 aa6.55□□□□□ -1.36
SDO1YLR022C TUB4P53378 473 aa6.55□□□□□ -1.36
SDO1YLR022C AGE1Q04412 482 aa6.55□□□□□ -1.36
SDO1YLR022C HST3P53687 447 aa6.54□□□□□ -1.36
SDO1YLR022C PUS5Q06244 254 aa6.54□□□□□ -1.36
SDO1YLR022C HSL1P34244 1518 aa6.54□□□□□ -1.36
SDO1YLR022C CLB5P30283 435 aa6.53□□□□□ -1.36
SDO1YLR022C REV3P14284 1504 aa6.53□□□□□ -1.36
SDO1YLR022C BUD4P47136 1447 aa6.52□□□□□ -1.37
SDO1YLR022C NUP42P49686 430 aaKnown RBP6.51□□□□□ -1.37
SDO1YLR022C MDS3P53094 1487 aa6.51□□□□□ -1.37
SDO1YLR022C MOD5P07884 428 aa6.5□□□□□ -1.37
SDO1YLR022C TEA1P47988 759 aa6.5□□□□□ -1.37
SDO1YLR022C THO2P53552 1597 aaKnown RBP6.49□□□□□ -1.37
SDO1YLR022C ACO2P39533 789 aa6.49□□□□□ -1.37
SDO1YLR022C YNL115CP53925 644 aa6.49□□□□□ -1.37
SDO1YLR022C NIS1P53939 407 aa6.49□□□□□ -1.37
SDO1YLR022C DIT2P21595 489 aa6.48□□□□□ -1.37
SDO1YLR022C SPB4P25808 606 aaPredicted RBP6.48□□□□□ -1.37
SDO1YLR022C TRK2P28584 889 aa6.48□□□□□ -1.37
SDO1YLR022C YJR115WP47152 169 aa6.48□□□□□ -1.37
SDO1YLR022C RTF1P53064 558 aa6.47□□□□□ -1.37
SDO1YLR022C CAF120P53836 1060 aa6.47□□□□□ -1.37
SDO1YLR022C SIT4P20604 311 aa6.45□□□□□ -1.38
SDO1YLR022C SLY41P22215 453 aa6.43□□□□□ -1.38
SDO1YLR022C KXD1P53158 218 aa6.41□□□□□ -1.38
SDO1YLR022C YGR035CP53222 116 aa6.41□□□□□ -1.38
SDO1YLR022C FPK1P53739 893 aa6.41□□□□□ -1.38
SDO1YLR022C YMR196WQ04336 1088 aa6.41□□□□□ -1.38
SDO1YLR022C SGS1P35187 1447 aa6.41□□□□□ -1.38
SDO1YLR022C BPT1P14772 1559 aa6.39□□□□□ -1.39
SDO1YLR022C PDC1P06169 563 aaKnown RBP6.38□□□□□ -1.39
SDO1YLR022C SCJ1P25303 377 aa6.38□□□□□ -1.39
SDO1YLR022C HXT10P43581 546 aa6.38□□□□□ -1.39
SDO1YLR022C MSB3P48566 633 aaPredicted RBP6.37□□□□□ -1.39
SDO1YLR022C HIR3P47171 1648 aa6.36□□□□□ -1.39
SDO1YLR022C YDL206WQ12424 762 aa6.36□□□□□ -1.39
SDO1YLR022C TBF1Q02457 562 aa6.35□□□□□ -1.39
SDO1YLR022C PEP1P32319 1579 aa6.35□□□□□ -1.39
SDO1YLR022C SYH1Q02875 849 aaKnown RBP6.34□□□□□ -1.39
SDO1YLR022C HPF1Q05164 967 aa6.34□□□□□ -1.39
SDO1YLR022C OPT2Q06593 877 aa6.34□□□□□ -1.39
SDO1YLR022C TPD3P31383 635 aa6.33□□□□□ -1.4
SDO1YLR022C YLR346CQ06139 101 aa6.33□□□□□ -1.4
SDO1YLR022C TRM1P15565 570 aaKnown RBP6.32□□□□□ -1.4
SDO1YLR022C KIP2P28743 706 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms