Protein–RNA interactions for Protein: P23615

SPT6, Transcription elongation factor SPT6, yeastyeast

Known RBP Predictions only

Length 1,451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT6P23615 YML009W-BYML009W-B 477 nt37.1■■■■□ 3.53
SPT6P23615 NOP1YDL014W 984 nt35.97■■■■□ 3.35
SPT6P23615 NSR1YGR159C 1245 nt35.48■■■■□ 3.27
SPT6P23615 YKL036CYKL036C 393 nt34.36■■■■□ 3.09
SPT6P23615 YJL027CYJL027C 417 nt32.29■■■□□ 2.76
SPT6P23615 SCS3YGL126W 1143 nt31.98■■■□□ 2.71
SPT6P23615 Q0297Q0297 156 nt31.92■■■□□ 2.7
SPT6P23615 SRX1YKL086W 384 nt31.63■■■□□ 2.65
SPT6P23615 MDJ1YFL016C 1536 nt31.13■■■□□ 2.57
SPT6P23615 YCR051WYCR051W 669 nt30.22■■■□□ 2.43
SPT6P23615 YOL085CYOL085C 342 nt29.68■■■□□ 2.34
SPT6P23615 PKP1YIL042C 1185 nt29.42■■■□□ 2.3
SPT6P23615 SCJ1YMR214W 1134 nt29.14■■■□□ 2.26
SPT6P23615 RPP1BYDL130W 321 nt28.68■■■□□ 2.18
SPT6P23615 ATS1YAL020C 1002 nt28.66■■■□□ 2.18
SPT6P23615 TRN1tP(UGG)A 72 nt28.15■■■□□ 2.1
SPT6P23615 SUF9tP(UGG)F 72 nt28.15■■■□□ 2.1
SPT6P23615 SUF8tP(UGG)H 72 nt28.15■■■□□ 2.1
SPT6P23615 tP(UGG)LtP(UGG)L 72 nt28.15■■■□□ 2.1
SPT6P23615 SUF7tP(UGG)M 72 nt28.15■■■□□ 2.1
SPT6P23615 tP(UGG)N1tP(UGG)N1 72 nt28.15■■■□□ 2.1
SPT6P23615 tP(UGG)N2tP(UGG)N2 72 nt28.15■■■□□ 2.1
SPT6P23615 tP(UGG)O1tP(UGG)O1 72 nt28.15■■■□□ 2.1
SPT6P23615 SUF11tP(UGG)O2 72 nt28.15■■■□□ 2.1
SPT6P23615 CCC1YLR220W 969 nt27.89■■■□□ 2.06
SPT6P23615 DBP2YNL112W 1641 nt27.78■■■□□ 2.04
SPT6P23615 PET122YER153C 765 nt27.54■■■□□ 2
SPT6P23615 SCR1SCR1 522 nt27.25■■□□□ 1.95
SPT6P23615 tP(UGG)O3tP(UGG)O3 72 nt26.87■■□□□ 1.89
SPT6P23615 RTC3YHR087W 336 nt26.85■■□□□ 1.89
SPT6P23615 RRN5YLR141W 1092 nt26.65■■□□□ 1.86
SPT6P23615 RSB1YOR049C 1065 nt26.55■■□□□ 1.84
SPT6P23615 PST2YDR032C 597 nt26.31■■□□□ 1.8
SPT6P23615 RVS167YDR388W 1449 nt26.17■■□□□ 1.78
SPT6P23615 YER088W-BYER088W-B 147 nt26.17■■□□□ 1.78
SPT6P23615 YKL097CYKL097C 411 nt25.98■■□□□ 1.75
SPT6P23615 YBR190WYBR190W 312 nt25.85■■□□□ 1.73
SPT6P23615 YDJ1YNL064C 1230 nt25.82■■□□□ 1.72
SPT6P23615 SHR5YOL110W 714 nt25.56■■□□□ 1.68
SPT6P23615 GAR1YHR089C 618 nt25.32■■□□□ 1.64
SPT6P23615 SHU1YHL006C 453 nt25.24■■□□□ 1.63
SPT6P23615 YOR139CYOR139C 393 nt24.83■■□□□ 1.57
SPT6P23615 DEP1YAL013W 1218 nt24.76■■□□□ 1.55
SPT6P23615 YAL037C-BYAL037C-B 975 nt24.65■■□□□ 1.54
SPT6P23615 TIR1YER011W 765 nt24.36■■□□□ 1.49
SPT6P23615 URN1YPR152C 1398 nt24.34■■□□□ 1.49
SPT6P23615 NPL3YDR432W 1245 nt24.32■■□□□ 1.48
SPT6P23615 YNL208WYNL208W 600 nt24.14■■□□□ 1.46
SPT6P23615 MNP1YGL068W 585 nt24.02■■□□□ 1.44
SPT6P23615 SRB2YHR041C 633 nt24■■□□□ 1.43
SPT6P23615 RPN10YHR200W 807 nt24■■□□□ 1.43
SPT6P23615 SSA1YAL005C 1929 nt23.93■■□□□ 1.42
SPT6P23615 YOL037CYOL037C 354 nt23.67■■□□□ 1.38
SPT6P23615 HOM6YJR139C 1080 nt23.66■■□□□ 1.38
SPT6P23615 WWM1YFL010C 636 nt23.6■■□□□ 1.37
SPT6P23615 OPI9YLR338W 858 nt23.6■■□□□ 1.37
SPT6P23615 tM(CAU)CtM(CAU)C 72 nt23.58■■□□□ 1.37
SPT6P23615 IMT4tM(CAU)E 72 nt23.58■■□□□ 1.37
SPT6P23615 IMT3tM(CAU)J3 72 nt23.58■■□□□ 1.37
SPT6P23615 IMT1tM(CAU)O1 72 nt23.58■■□□□ 1.37
SPT6P23615 IMT2tM(CAU)P 72 nt23.58■■□□□ 1.37
SPT6P23615 YGR021WYGR021W 873 nt23.56■■□□□ 1.36
SPT6P23615 SAH1YER043C 1350 nt23.38■■□□□ 1.33
SPT6P23615 YJR120WYJR120W 351 nt23.3■■□□□ 1.32
SPT6P23615 RKM5YLR137W 1104 nt23.3■■□□□ 1.32
SPT6P23615 MOT3YMR070W 1473 nt23.25■■□□□ 1.31
SPT6P23615 YJR018WYJR018W 363 nt23.17■■□□□ 1.3
SPT6P23615 PUS2YGL063W 1113 nt23.15■■□□□ 1.3
SPT6P23615 BSC6YOL137W 1494 nt23.03■■□□□ 1.28
SPT6P23615 YFL021C-AYFL021C-A 855 nt23.01■■□□□ 1.27
SPT6P23615 YLR281CYLR281C 468 nt22.95■■□□□ 1.26
SPT6P23615 PUN1YLR414C 792 nt22.91■■□□□ 1.26
SPT6P23615 SSA3YBL075C 1950 nt22.9■■□□□ 1.26
SPT6P23615 RPP2BYDR382W 333 nt22.9■■□□□ 1.26
SPT6P23615 PUT4YOR348C 1884 nt22.84■■□□□ 1.25
SPT6P23615 ARE1YCR048W 1833 nt22.83■■□□□ 1.24
SPT6P23615 WHI5YOR083W 888 nt22.8■■□□□ 1.24
SPT6P23615 FMP45YDL222C 930 nt22.72■■□□□ 1.23
SPT6P23615 YHR049C-AYHR049C-A 297 nt22.71■■□□□ 1.23
SPT6P23615 BDH2YAL061W 1254 nt22.68■■□□□ 1.22
SPT6P23615 YLR236CYLR236C 324 nt22.66■■□□□ 1.22
SPT6P23615 YPR011CYPR011C 981 nt22.58■■□□□ 1.2
SPT6P23615 PTC2YER089C 1395 nt22.53■■□□□ 1.2
SPT6P23615 DSK2YMR276W 1122 nt22.47■■□□□ 1.19
SPT6P23615 MRPL8YJL063C 717 nt22.4■■□□□ 1.18
SPT6P23615 YCH1YGR203W 447 nt22.34■■□□□ 1.17
SPT6P23615 UBX6YJL048C 1191 nt22.33■■□□□ 1.16
SPT6P23615 LSM3YLR438C-A 270 nt22.31■■□□□ 1.16
SPT6P23615 YBL100CYBL100C 315 nt22.27■■□□□ 1.16
SPT6P23615 POA1YBR022W 534 nt22.26■■□□□ 1.15
SPT6P23615 BUD23YCR047C 828 nt22.2■■□□□ 1.14
SPT6P23615 FIS1YIL065C 468 nt22.15■■□□□ 1.14
SPT6P23615 LPX1YOR084W 1164 nt22.15■■□□□ 1.14
SPT6P23615 SPP1YPL138C 1062 nt22.15■■□□□ 1.14
SPT6P23615 YLR154C-GYLR154C-G 150 nt22.12■■□□□ 1.13
SPT6P23615 YEL076C-AYEL076C-A 651 nt22.1■■□□□ 1.13
SPT6P23615 YEL076CYEL076C 651 nt22.1■■□□□ 1.13
SPT6P23615 FPR4YLR449W 1179 nt22.1■■□□□ 1.13
SPT6P23615 YLR464WYLR464W 651 nt22.1■■□□□ 1.13
SPT6P23615 IMP2'YIL154C 1041 nt22.07■■□□□ 1.12
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms