RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C TY1A-MR2P0CX69 440 aa8.66□□□□□ -1.02
CMS1YLR003C GAR1P28007 205 aaKnown RBP8.66□□□□□ -1.02
CMS1YLR003C TY1A-JR2P47099 440 aa8.66□□□□□ -1.02
CMS1YLR003C TY1A-DR1Q03856 440 aa8.66□□□□□ -1.02
CMS1YLR003C TY1A-ML1Q04706 440 aaKnown RBP8.66□□□□□ -1.02
CMS1YLR003C YPR148CQ06523 435 aa8.66□□□□□ -1.02
CMS1YLR003C TY1A-BRQ12217 440 aa8.66□□□□□ -1.02
CMS1YLR003C TY1A-NL2Q12470 440 aa8.66□□□□□ -1.02
CMS1YLR003C TY1A-GR2Q12485 440 aa8.66□□□□□ -1.02
CMS1YLR003C SEC2P17065 759 aa8.65□□□□□ -1.02
CMS1YLR003C GBP2P25555 427 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
CMS1YLR003C CDC4P07834 779 aa8.62□□□□□ -1.03
CMS1YLR003C FRK1Q03002 865 aaPredicted RBP8.62□□□□□ -1.03
CMS1YLR003C MVP1P40959 511 aaKnown RBP8.61□□□□□ -1.03
CMS1YLR003C PAT1P25644 796 aaKnown RBP8.6□□□□□ -1.03
CMS1YLR003C MAK21Q12176 1025 aaKnown RBP8.6□□□□□ -1.03
CMS1YLR003C COX6P00427 148 aa8.58□□□□□ -1.04
CMS1YLR003C RRN7P40992 514 aa8.58□□□□□ -1.04
CMS1YLR003C BDP1P46678 594 aa8.58□□□□□ -1.04
CMS1YLR003C YPR109WQ06104 294 aa8.56□□□□□ -1.04
CMS1YLR003C HED1Q03937 162 aa8.54□□□□□ -1.04
CMS1YLR003C RGR1P19263 1082 aa8.53□□□□□ -1.04
CMS1YLR003C MET22P32179 357 aa8.52□□□□□ -1.05
CMS1YLR003C VPS70P47161 811 aa8.52□□□□□ -1.05
CMS1YLR003C ENV9Q08651 330 aa8.5□□□□□ -1.05
CMS1YLR003C KEX2P13134 814 aa8.45□□□□□ -1.06
CMS1YLR003C YDR444WQ04093 687 aa8.44□□□□□ -1.06
CMS1YLR003C ERF2Q06551 359 aa8.43□□□□□ -1.06
CMS1YLR003C ASH1P34233 588 aa8.4□□□□□ -1.06
CMS1YLR003C MOD5P07884 428 aa8.39□□□□□ -1.07
CMS1YLR003C PAC1P39946 494 aaKnown RBP8.39□□□□□ -1.07
CMS1YLR003C MET32Q12041 191 aa8.39□□□□□ -1.07
CMS1YLR003C AFT1P22149 690 aa8.38□□□□□ -1.07
CMS1YLR003C HST3P53687 447 aa8.37□□□□□ -1.07
CMS1YLR003C LCB5Q06147 687 aaKnown RBP8.37□□□□□ -1.07
CMS1YLR003C PSE1P32337 1089 aaKnown RBP8.35□□□□□ -1.07
CMS1YLR003C TUB4P53378 473 aa8.33□□□□□ -1.08
CMS1YLR003C AGE1Q04412 482 aa8.33□□□□□ -1.08
CMS1YLR003C CLB5P30283 435 aa8.32□□□□□ -1.08
CMS1YLR003C PUS5Q06244 254 aa8.32□□□□□ -1.08
CMS1YLR003C YDL176WQ12027 708 aa8.31□□□□□ -1.08
CMS1YLR003C RTF1P53064 558 aa8.29□□□□□ -1.08
CMS1YLR003C PBS2P08018 668 aa8.28□□□□□ -1.08
CMS1YLR003C RRD1P40454 393 aaKnown RBP8.28□□□□□ -1.08
CMS1YLR003C CKB1P43639 278 aa8.28□□□□□ -1.08
CMS1YLR003C YJR115WP47152 169 aa8.26□□□□□ -1.09
CMS1YLR003C YNL115CP53925 644 aa8.26□□□□□ -1.09
CMS1YLR003C KXD1P53158 218 aa8.21□□□□□ -1.1
CMS1YLR003C TPD3P31383 635 aa8.2□□□□□ -1.1
CMS1YLR003C SIT4P20604 311 aa8.19□□□□□ -1.1
CMS1YLR003C MSB3P48566 633 aaPredicted RBP8.19□□□□□ -1.1
CMS1YLR003C MAM3Q12296 706 aa8.19□□□□□ -1.1
CMS1YLR003C SYH1Q02875 849 aaKnown RBP8.17□□□□□ -1.1
CMS1YLR003C HXT10P43581 546 aa8.16□□□□□ -1.1
CMS1YLR003C TEA1P47988 759 aa8.15□□□□□ -1.1
CMS1YLR003C PDC1P06169 563 aaKnown RBP8.11□□□□□ -1.11
CMS1YLR003C UGA3P26370 528 aa8.11□□□□□ -1.11
CMS1YLR003C ACO2P39533 789 aa8.11□□□□□ -1.11
CMS1YLR003C CAF120P53836 1060 aa8.11□□□□□ -1.11
CMS1YLR003C NIS1P53939 407 aa8.11□□□□□ -1.11
CMS1YLR003C IES2P40154 320 aa8.1□□□□□ -1.11
CMS1YLR003C YLR346CQ06139 101 aa8.09□□□□□ -1.11
CMS1YLR003C SRF1Q12516 437 aa8.09□□□□□ -1.11
CMS1YLR003C DSF2P38213 736 aa8.08□□□□□ -1.12
CMS1YLR003C PTK2P47116 818 aaKnown RBP8.08□□□□□ -1.12
CMS1YLR003C OPT2Q06593 877 aa8.08□□□□□ -1.12
CMS1YLR003C SLY41P22215 453 aa8.06□□□□□ -1.12
CMS1YLR003C KIP2P28743 706 aa8.05□□□□□ -1.12
CMS1YLR003C NUP42P49686 430 aaKnown RBP8.04□□□□□ -1.12
CMS1YLR003C MTC5Q03897 1148 aa8.04□□□□□ -1.12
CMS1YLR003C ALR1Q08269 859 aa8.04□□□□□ -1.12
CMS1YLR003C RPA14P50106 137 aa8.03□□□□□ -1.12
CMS1YLR003C FPK1P53739 893 aa8.02□□□□□ -1.13
CMS1YLR003C YMR196WQ04336 1088 aa8.02□□□□□ -1.13
CMS1YLR003C IXR1P33417 597 aa8.01□□□□□ -1.13
CMS1YLR003C GLY1P37303 387 aaKnown RBP8.01□□□□□ -1.13
CMS1YLR003C RTT106P40161 455 aa8.01□□□□□ -1.13
CMS1YLR003C NUP85P46673 744 aa8.01□□□□□ -1.13
CMS1YLR003C TBF1Q02457 562 aa8.01□□□□□ -1.13
CMS1YLR003C YPR097WQ06839 1073 aa8.01□□□□□ -1.13
CMS1YLR003C TRK2P28584 889 aa8□□□□□ -1.13
CMS1YLR003C MRT4P33201 236 aaKnown RBP8□□□□□ -1.13
CMS1YLR003C PUS6P53294 404 aa8□□□□□ -1.13
CMS1YLR003C TYW1Q08960 810 aaKnown RBP8□□□□□ -1.13
CMS1YLR003C YDL206WQ12424 762 aa8□□□□□ -1.13
CMS1YLR003C YGR035CP53222 116 aa7.99□□□□□ -1.13
CMS1YLR003C SCW11P53189 542 aa7.97□□□□□ -1.13
CMS1YLR003C MIP1P15801 1254 aa7.95□□□□□ -1.14
CMS1YLR003C DIT2P21595 489 aa7.95□□□□□ -1.14
CMS1YLR003C YIR007WP40566 764 aa7.95□□□□□ -1.14
CMS1YLR003C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
CMS1YLR003C HPF1Q05164 967 aa7.93□□□□□ -1.14
CMS1YLR003C TY1A-BLQ12266 440 aa7.93□□□□□ -1.14
CMS1YLR003C TRM1P15565 570 aaKnown RBP7.92□□□□□ -1.14
CMS1YLR003C SAS10Q12136 610 aaPredicted RBP7.91□□□□□ -1.14
CMS1YLR003C SPB4P25808 606 aaPredicted RBP7.89□□□□□ -1.15
CMS1YLR003C HST2P53686 357 aa7.89□□□□□ -1.15
CMS1YLR003C ARG82P07250 355 aa7.88□□□□□ -1.15
CMS1YLR003C SCJ1P25303 377 aa7.88□□□□□ -1.15
CMS1YLR003C LSC2P53312 427 aa7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms