RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W TY1A-NL2Q12470 440 aa7.51□□□□□ -1.21
VMA5YKL080W TY1A-GR2Q12485 440 aa7.51□□□□□ -1.21
VMA5YKL080W MRF1P30775 413 aaPredicted RBP7.5□□□□□ -1.21
VMA5YKL080W MVP1P40959 511 aaKnown RBP7.5□□□□□ -1.21
VMA5YKL080W CKB1P43639 278 aa7.48□□□□□ -1.21
VMA5YKL080W PBS2P08018 668 aa7.47□□□□□ -1.21
VMA5YKL080W CST6P40535 587 aa7.47□□□□□ -1.21
VMA5YKL080W RGR1P19263 1082 aa7.46□□□□□ -1.22
VMA5YKL080W MAK21Q12176 1025 aaKnown RBP7.46□□□□□ -1.22
VMA5YKL080W GCD11P32481 527 aaKnown RBP7.45□□□□□ -1.22
VMA5YKL080W CLA4P48562 842 aa7.45□□□□□ -1.22
VMA5YKL080W SPB4P25808 606 aaPredicted RBP7.44□□□□□ -1.22
VMA5YKL080W YPR109WQ06104 294 aa7.44□□□□□ -1.22
VMA5YKL080W ERG12P07277 443 aa7.43□□□□□ -1.22
VMA5YKL080W AIR1P40507 360 aaKnown RBP7.43□□□□□ -1.22
VMA5YKL080W NPL4P33755 580 aa7.42□□□□□ -1.22
VMA5YKL080W LAM6Q08001 693 aa7.41□□□□□ -1.22
VMA5YKL080W ERF2Q06551 359 aa7.39□□□□□ -1.23
VMA5YKL080W SPT16P32558 1035 aaKnown RBP7.37□□□□□ -1.23
VMA5YKL080W RRN7P40992 514 aa7.36□□□□□ -1.23
VMA5YKL080W MAM3Q12296 706 aa7.36□□□□□ -1.23
VMA5YKL080W KEX2P13134 814 aa7.34□□□□□ -1.23
VMA5YKL080W DSF2P38213 736 aa7.33□□□□□ -1.24
VMA5YKL080W IES2P40154 320 aa7.33□□□□□ -1.24
VMA5YKL080W BDP1P46678 594 aa7.33□□□□□ -1.24
VMA5YKL080W FRK1Q03002 865 aaPredicted RBP7.33□□□□□ -1.24
VMA5YKL080W BRE2P43132 505 aa7.31□□□□□ -1.24
VMA5YKL080W PSE1P32337 1089 aaKnown RBP7.28□□□□□ -1.24
VMA5YKL080W CDC4P07834 779 aa7.27□□□□□ -1.25
VMA5YKL080W PAC1P39946 494 aaKnown RBP7.27□□□□□ -1.25
VMA5YKL080W YPL062WQ02781 134 aa7.27□□□□□ -1.25
VMA5YKL080W MOD5P07884 428 aa7.26□□□□□ -1.25
VMA5YKL080W DIT2P21595 489 aa7.26□□□□□ -1.25
VMA5YKL080W AGE1Q04412 482 aa7.26□□□□□ -1.25
VMA5YKL080W PAT1P25644 796 aaKnown RBP7.25□□□□□ -1.25
VMA5YKL080W NUP42P49686 430 aaKnown RBP7.24□□□□□ -1.25
VMA5YKL080W HED1Q03937 162 aa7.24□□□□□ -1.25
VMA5YKL080W GCR2Q01722 534 aa7.23□□□□□ -1.25
VMA5YKL080W TUB4P53378 473 aa7.22□□□□□ -1.25
VMA5YKL080W GAR1P28007 205 aaKnown RBP7.2□□□□□ -1.26
VMA5YKL080W MET32Q12041 191 aa7.19□□□□□ -1.26
VMA5YKL080W SIT4P20604 311 aa7.18□□□□□ -1.26
VMA5YKL080W CLB5P30283 435 aa7.18□□□□□ -1.26
VMA5YKL080W MET22P32179 357 aa7.18□□□□□ -1.26
VMA5YKL080W PUS5Q06244 254 aa7.17□□□□□ -1.26
VMA5YKL080W RTF1P53064 558 aa7.16□□□□□ -1.26
VMA5YKL080W YNL115CP53925 644 aa7.16□□□□□ -1.26
VMA5YKL080W ASH1P34233 588 aa7.14□□□□□ -1.27
VMA5YKL080W TEA1P47988 759 aa7.14□□□□□ -1.27
VMA5YKL080W NIS1P53939 407 aa7.14□□□□□ -1.27
VMA5YKL080W GLC3P32775 704 aa7.12□□□□□ -1.27
VMA5YKL080W ATF2P53296 535 aa7.12□□□□□ -1.27
VMA5YKL080W AFT1P22149 690 aa7.11□□□□□ -1.27
VMA5YKL080W ENV9Q08651 330 aa7.11□□□□□ -1.27
VMA5YKL080W GBP2P25555 427 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
VMA5YKL080W YNR021WP53723 404 aaKnown RBP7.08□□□□□ -1.28
VMA5YKL080W TPD3P31383 635 aa7.07□□□□□ -1.28
VMA5YKL080W YDR444WQ04093 687 aa7.07□□□□□ -1.28
VMA5YKL080W FPK1P53739 893 aa7.06□□□□□ -1.28
VMA5YKL080W PDC1P06169 563 aaKnown RBP7.05□□□□□ -1.28
VMA5YKL080W HXT10P43581 546 aa7.04□□□□□ -1.28
VMA5YKL080W HST3P53687 447 aa7.04□□□□□ -1.28
VMA5YKL080W YDL176WQ12027 708 aa7.04□□□□□ -1.28
VMA5YKL080W YJR115WP47152 169 aa7.03□□□□□ -1.28
VMA5YKL080W KXD1P53158 218 aa7.03□□□□□ -1.28
VMA5YKL080W YMR196WQ04336 1088 aa7.03□□□□□ -1.28
VMA5YKL080W LCB5Q06147 687 aaKnown RBP7.03□□□□□ -1.28
VMA5YKL080W SLY41P22215 453 aa7.02□□□□□ -1.29
VMA5YKL080W RRD1P40454 393 aaKnown RBP7.02□□□□□ -1.29
VMA5YKL080W SCJ1P25303 377 aa7.01□□□□□ -1.29
VMA5YKL080W LEU3P08638 886 aa7□□□□□ -1.29
VMA5YKL080W SYH1Q02875 849 aaKnown RBP6.97□□□□□ -1.29
VMA5YKL080W TYW1Q08960 810 aaKnown RBP6.97□□□□□ -1.29
VMA5YKL080W PUS6P53294 404 aa6.96□□□□□ -1.3
VMA5YKL080W RPA14P50106 137 aa6.95□□□□□ -1.3
VMA5YKL080W YPR097WQ06839 1073 aa6.95□□□□□ -1.3
VMA5YKL080W AIM7Q12156 149 aa6.95□□□□□ -1.3
VMA5YKL080W MMP1Q12372 583 aa6.95□□□□□ -1.3
VMA5YKL080W YDL206WQ12424 762 aa6.95□□□□□ -1.3
VMA5YKL080W MSB3P48566 633 aaPredicted RBP6.94□□□□□ -1.3
VMA5YKL080W HST2P53686 357 aa6.94□□□□□ -1.3
VMA5YKL080W TRM1P15565 570 aaKnown RBP6.93□□□□□ -1.3
VMA5YKL080W ESS1P22696 170 aa6.93□□□□□ -1.3
VMA5YKL080W KIN1P13185 1064 aa6.92□□□□□ -1.3
VMA5YKL080W GLN1P32288 370 aaKnown RBP6.92□□□□□ -1.3
VMA5YKL080W RPN1P38764 993 aaKnown RBP6.92□□□□□ -1.3
VMA5YKL080W ALR1Q08269 859 aa6.92□□□□□ -1.3
VMA5YKL080W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
VMA5YKL080W YJU3P28321 313 aa6.89□□□□□ -1.31
VMA5YKL080W MRT4P33201 236 aaKnown RBP6.89□□□□□ -1.31
VMA5YKL080W PTK2P47116 818 aaKnown RBP6.89□□□□□ -1.31
VMA5YKL080W CSN12P47130 423 aa6.89□□□□□ -1.31
VMA5YKL080W UGA3P26370 528 aa6.88□□□□□ -1.31
VMA5YKL080W KTR1P27810 393 aaKnown RBP6.88□□□□□ -1.31
VMA5YKL080W KIP2P28743 706 aa6.88□□□□□ -1.31
VMA5YKL080W TBF1Q02457 562 aa6.88□□□□□ -1.31
VMA5YKL080W IXR1P33417 597 aa6.87□□□□□ -1.31
VMA5YKL080W ACO2P39533 789 aa6.87□□□□□ -1.31
VMA5YKL080W PKH3Q03306 898 aaPredicted RBP6.87□□□□□ -1.31
VMA5YKL080W OPT2Q06593 877 aa6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms