RNA–Protein interactions for RNA: YJR022W

LSM8, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM8, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM8YJR022W TY1A-ML1Q04706 440 aaKnown RBP6.01□□□□□ -1.45
LSM8YJR022W LAM6Q08001 693 aa6.01□□□□□ -1.45
LSM8YJR022W TY1A-BRQ12217 440 aa6.01□□□□□ -1.45
LSM8YJR022W TY1A-NL2Q12470 440 aa6.01□□□□□ -1.45
LSM8YJR022W TY1A-GR2Q12485 440 aa6.01□□□□□ -1.45
LSM8YJR022W SEC2P17065 759 aa5.99□□□□□ -1.45
LSM8YJR022W YPR148CQ06523 435 aa5.99□□□□□ -1.45
LSM8YJR022W GCD11P32481 527 aaKnown RBP5.98□□□□□ -1.45
LSM8YJR022W SPT16P32558 1035 aaKnown RBP5.98□□□□□ -1.45
LSM8YJR022W GCR2Q01722 534 aa5.98□□□□□ -1.45
LSM8YJR022W GAR1P28007 205 aaKnown RBP5.96□□□□□ -1.46
LSM8YJR022W FRK1Q03002 865 aaPredicted RBP5.96□□□□□ -1.46
LSM8YJR022W CDC4P07834 779 aa5.94□□□□□ -1.46
LSM8YJR022W MVP1P40959 511 aaKnown RBP5.94□□□□□ -1.46
LSM8YJR022W RRN7P40992 514 aa5.93□□□□□ -1.46
LSM8YJR022W BDP1P46678 594 aa5.93□□□□□ -1.46
LSM8YJR022W COX6P00427 148 aa5.92□□□□□ -1.46
LSM8YJR022W GBP2P25555 427 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
LSM8YJR022W MAK21Q12176 1025 aaKnown RBP5.91□□□□□ -1.46
LSM8YJR022W YPR109WQ06104 294 aa5.9□□□□□ -1.46
LSM8YJR022W RGR1P19263 1082 aa5.89□□□□□ -1.47
LSM8YJR022W PAT1P25644 796 aaKnown RBP5.88□□□□□ -1.47
LSM8YJR022W VPS70P47161 811 aa5.88□□□□□ -1.47
LSM8YJR022W HED1Q03937 162 aa5.88□□□□□ -1.47
LSM8YJR022W MET22P32179 357 aa5.87□□□□□ -1.47
LSM8YJR022W ENV9Q08651 330 aa5.86□□□□□ -1.47
LSM8YJR022W KEX2P13134 814 aa5.85□□□□□ -1.47
LSM8YJR022W ERF2Q06551 359 aa5.85□□□□□ -1.47
LSM8YJR022W PAC1P39946 494 aaKnown RBP5.81□□□□□ -1.48
LSM8YJR022W YDR444WQ04093 687 aa5.81□□□□□ -1.48
LSM8YJR022W MET32Q12041 191 aa5.81□□□□□ -1.48
LSM8YJR022W MOD5P07884 428 aa5.8□□□□□ -1.48
LSM8YJR022W ASH1P34233 588 aa5.79□□□□□ -1.48
LSM8YJR022W AGE1Q04412 482 aa5.78□□□□□ -1.48
LSM8YJR022W AFT1P22149 690 aa5.77□□□□□ -1.49
LSM8YJR022W LCB5Q06147 687 aaKnown RBP5.77□□□□□ -1.49
LSM8YJR022W PUS5Q06244 254 aa5.76□□□□□ -1.49
LSM8YJR022W YDL176WQ12027 708 aa5.76□□□□□ -1.49
LSM8YJR022W PSE1P32337 1089 aaKnown RBP5.75□□□□□ -1.49
LSM8YJR022W TUB4P53378 473 aa5.75□□□□□ -1.49
LSM8YJR022W HST3P53687 447 aa5.74□□□□□ -1.49
LSM8YJR022W CLB5P30283 435 aa5.72□□□□□ -1.49
LSM8YJR022W PBS2P08018 668 aa5.71□□□□□ -1.5
LSM8YJR022W RRD1P40454 393 aaKnown RBP5.71□□□□□ -1.5
LSM8YJR022W RTF1P53064 558 aa5.71□□□□□ -1.5
LSM8YJR022W YJR115WP47152 169 aa5.7□□□□□ -1.5
LSM8YJR022W CKB1P43639 278 aa5.68□□□□□ -1.5
LSM8YJR022W YNL115CP53925 644 aa5.68□□□□□ -1.5
LSM8YJR022W SIT4P20604 311 aa5.66□□□□□ -1.5
LSM8YJR022W TPD3P31383 635 aa5.65□□□□□ -1.5
LSM8YJR022W MSB3P48566 633 aaPredicted RBP5.65□□□□□ -1.5
LSM8YJR022W KXD1P53158 218 aa5.65□□□□□ -1.5
LSM8YJR022W MAM3Q12296 706 aa5.65□□□□□ -1.5
LSM8YJR022W HXT10P43581 546 aa5.62□□□□□ -1.51
LSM8YJR022W SYH1Q02875 849 aaKnown RBP5.62□□□□□ -1.51
LSM8YJR022W PDC1P06169 563 aaKnown RBP5.61□□□□□ -1.51
LSM8YJR022W IES2P40154 320 aa5.61□□□□□ -1.51
LSM8YJR022W TEA1P47988 759 aa5.61□□□□□ -1.51
LSM8YJR022W NIS1P53939 407 aa5.61□□□□□ -1.51
LSM8YJR022W TAF7Q05021 590 aa5.61□□□□□ -1.51
LSM8YJR022W CAF120P53836 1060 aa5.6□□□□□ -1.51
LSM8YJR022W ACO2P39533 789 aa5.59□□□□□ -1.51
LSM8YJR022W UGA3P26370 528 aa5.58□□□□□ -1.52
LSM8YJR022W DSF2P38213 736 aa5.58□□□□□ -1.52
LSM8YJR022W PTK2P47116 818 aaKnown RBP5.58□□□□□ -1.52
LSM8YJR022W NUP42P49686 430 aaKnown RBP5.57□□□□□ -1.52
LSM8YJR022W OPT2Q06593 877 aa5.57□□□□□ -1.52
LSM8YJR022W SLY41P22215 453 aa5.56□□□□□ -1.52
LSM8YJR022W DMA1P38823 416 aa5.56□□□□□ -1.52
LSM8YJR022W SRF1Q12516 437 aa5.55□□□□□ -1.52
LSM8YJR022W FPK1P53739 893 aa5.54□□□□□ -1.52
LSM8YJR022W KIP2P28743 706 aa5.53□□□□□ -1.52
LSM8YJR022W RPA14P50106 137 aa5.53□□□□□ -1.52
LSM8YJR022W YLR346CQ06139 101 aa5.53□□□□□ -1.52
LSM8YJR022W ALR1Q08269 859 aa5.53□□□□□ -1.52
LSM8YJR022W YDL206WQ12424 762 aa5.53□□□□□ -1.52
LSM8YJR022W MRT4P33201 236 aaKnown RBP5.52□□□□□ -1.53
LSM8YJR022W TBF1Q02457 562 aa5.52□□□□□ -1.53
LSM8YJR022W YPR097WQ06839 1073 aa5.52□□□□□ -1.53
LSM8YJR022W IXR1P33417 597 aa5.51□□□□□ -1.53
LSM8YJR022W GLY1P37303 387 aaKnown RBP5.51□□□□□ -1.53
LSM8YJR022W MTC5Q03897 1148 aa5.51□□□□□ -1.53
LSM8YJR022W YMR196WQ04336 1088 aa5.51□□□□□ -1.53
LSM8YJR022W TYW1Q08960 810 aaKnown RBP5.51□□□□□ -1.53
LSM8YJR022W DIT2P21595 489 aa5.5□□□□□ -1.53
LSM8YJR022W TRK2P28584 889 aa5.5□□□□□ -1.53
LSM8YJR022W NUP85P46673 744 aa5.5□□□□□ -1.53
LSM8YJR022W YGR035CP53222 116 aa5.5□□□□□ -1.53
LSM8YJR022W PUS6P53294 404 aa5.5□□□□□ -1.53
LSM8YJR022W YIR007WP40566 764 aa5.49□□□□□ -1.53
LSM8YJR022W SCW11P53189 542 aa5.48□□□□□ -1.53
LSM8YJR022W TY1A-BLQ12266 440 aa5.48□□□□□ -1.53
LSM8YJR022W TRM1P15565 570 aaKnown RBP5.47□□□□□ -1.53
LSM8YJR022W MIP1P15801 1254 aa5.47□□□□□ -1.53
LSM8YJR022W RTT106P40161 455 aa5.47□□□□□ -1.53
LSM8YJR022W HPF1Q05164 967 aa5.47□□□□□ -1.53
LSM8YJR022W SAS10Q12136 610 aaPredicted RBP5.47□□□□□ -1.53
LSM8YJR022W SCJ1P25303 377 aa5.46□□□□□ -1.54
LSM8YJR022W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
LSM8YJR022W HST2P53686 357 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 87.6 ms