RNA–Protein interactions for RNA: YJR022W

LSM8, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM8, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM8YJR022W MTC1P47018 478 aaKnown RBP11.92□□□□□ -0.5
LSM8YJR022W FAP1P53971 965 aa11.32□□□□□ -0.6
LSM8YJR022W PRY3P47033 881 aa10.66□□□□□ -0.7
LSM8YJR022W DRS1P32892 752 aaKnown RBP10.58□□□□□ -0.72
LSM8YJR022W PRI1P10363 409 aa10.34□□□□□ -0.75
LSM8YJR022W AAD16Q02895 342 aa10.34□□□□□ -0.75
LSM8YJR022W YCK3P39962 524 aa10.07□□□□□ -0.8
LSM8YJR022W ISW2Q08773 1120 aa9.98□□□□□ -0.81
LSM8YJR022W HAA1Q12753 694 aaKnown RBP9.96□□□□□ -0.82
LSM8YJR022W RPG1P38249 964 aaKnown RBP9.89□□□□□ -0.83
LSM8YJR022W TSR3Q12094 313 aaKnown RBP9.74□□□□□ -0.85
LSM8YJR022W DIP2Q12220 943 aaPredicted RBP9.47□□□□□ -0.89
LSM8YJR022W MRPL32P25348 183 aa9.36□□□□□ -0.91
LSM8YJR022W RSE1Q04693 1361 aaKnown RBP9.3□□□□□ -0.92
LSM8YJR022W YGL015CP33199 130 aa9.12□□□□□ -0.95
LSM8YJR022W RPL17AP05740 184 aaKnown RBP9.05□□□□□ -0.96
LSM8YJR022W REB1P21538 810 aa9.05□□□□□ -0.96
LSM8YJR022W RPL17BP46990 184 aaKnown RBP9.05□□□□□ -0.96
LSM8YJR022W AVT3P36062 692 aa8.98□□□□□ -0.97
LSM8YJR022W CDC27P38042 758 aa8.81□□□□□ -1
LSM8YJR022W YKR023WP36119 530 aaKnown RBP8.65□□□□□ -1.02
LSM8YJR022W SPT21P35209 758 aa8.64□□□□□ -1.03
LSM8YJR022W UBP10P53874 792 aaPredicted RBP8.63□□□□□ -1.03
LSM8YJR022W BUD31P25337 157 aaPredicted RBP8.61□□□□□ -1.03
LSM8YJR022W MAP2P38174 421 aaKnown RBP8.6□□□□□ -1.03
LSM8YJR022W BFR2Q06631 534 aaKnown RBP8.53□□□□□ -1.04
LSM8YJR022W TFC8Q12308 588 aa8.48□□□□□ -1.05
LSM8YJR022W HOP09932 586 aa8.47□□□□□ -1.05
LSM8YJR022W DCD1P06773 312 aa8.46□□□□□ -1.06
LSM8YJR022W SCY1P53009 804 aa8.33□□□□□ -1.08
LSM8YJR022W TIF4632P39936 914 aaKnown RBP8.26□□□□□ -1.09
LSM8YJR022W SLX5P32828 619 aaKnown RBP8.25□□□□□ -1.09
LSM8YJR022W TGL3P40308 642 aa8.24□□□□□ -1.09
LSM8YJR022W RIM101P33400 625 aa8.2□□□□□ -1.1
LSM8YJR022W BCH2P36122 765 aa8.17□□□□□ -1.1
LSM8YJR022W UBP9P39967 754 aa8.14□□□□□ -1.11
LSM8YJR022W SIS1P25294 352 aaKnown RBP8.13□□□□□ -1.11
LSM8YJR022W EPS1P40557 701 aa7.94□□□□□ -1.14
LSM8YJR022W BDF1P35817 686 aa7.92□□□□□ -1.14
LSM8YJR022W OXP1P28273 1286 aa7.91□□□□□ -1.14
LSM8YJR022W MST1P07236 462 aa7.84□□□□□ -1.15
LSM8YJR022W PTP3P40048 928 aa7.8□□□□□ -1.16
LSM8YJR022W YBL029C-AQ3E756 94 aa7.8□□□□□ -1.16
LSM8YJR022W YIL055CP40523 627 aaKnown RBP7.78□□□□□ -1.16
LSM8YJR022W YOR238WQ08634 303 aa7.78□□□□□ -1.16
LSM8YJR022W NSR1P27476 414 aaKnown RBP RIP-Chip data7.74□□□□□ -1.17not detected
LSM8YJR022W VNX1P42839 908 aa7.69□□□□□ -1.18
LSM8YJR022W BBC1P47068 1157 aa7.69□□□□□ -1.18
LSM8YJR022W RSM7P47150 247 aa7.67□□□□□ -1.18
LSM8YJR022W YAP5P40574 245 aa7.66□□□□□ -1.18
LSM8YJR022W AI2P03876 854 aa7.65□□□□□ -1.18
LSM8YJR022W SPP1Q03012 353 aa7.61□□□□□ -1.19
LSM8YJR022W YAH1Q12184 172 aaKnown RBP7.59□□□□□ -1.19
LSM8YJR022W WSC3Q12215 556 aa7.59□□□□□ -1.19
LSM8YJR022W AIR2Q12476 344 aaKnown RBP7.52□□□□□ -1.21
LSM8YJR022W TIF11P38912 153 aaKnown RBP7.51□□□□□ -1.21
LSM8YJR022W GTT3P39996 337 aa7.5□□□□□ -1.21
LSM8YJR022W FKH1P40466 484 aa7.5□□□□□ -1.21
LSM8YJR022W YJL171CP46992 396 aa7.45□□□□□ -1.22
LSM8YJR022W YLR271WQ06152 274 aa7.45□□□□□ -1.22
LSM8YJR022W PSD2P53037 1138 aaKnown RBP7.41□□□□□ -1.22
LSM8YJR022W LDB19Q12502 818 aa7.41□□□□□ -1.22
LSM8YJR022W PIB1Q06651 286 aa7.4□□□□□ -1.22
LSM8YJR022W ULI1P43604 169 aa7.39□□□□□ -1.23
LSM8YJR022W IOC2Q12072 812 aa7.38□□□□□ -1.23
LSM8YJR022W MRM1P25270 412 aa7.35□□□□□ -1.23
LSM8YJR022W TFA1P36100 482 aa7.32□□□□□ -1.24
LSM8YJR022W BMT6Q12291 365 aa7.32□□□□□ -1.24
LSM8YJR022W MSB4Q12317 492 aa7.31□□□□□ -1.24
LSM8YJR022W EAP1P36041 632 aaKnown RBP7.27□□□□□ -1.25
LSM8YJR022W YOL036WQ08206 761 aa7.25□□□□□ -1.25
LSM8YJR022W SET4P42948 560 aa7.24□□□□□ -1.25
LSM8YJR022W TRP5P00931 707 aaKnown RBP7.22□□□□□ -1.25
LSM8YJR022W RTG1P32607 177 aa7.22□□□□□ -1.25
LSM8YJR022W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
LSM8YJR022W SSP1P38871 571 aa7.21□□□□□ -1.26
LSM8YJR022W YMR1P47147 688 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
LSM8YJR022W VPS29P38759 282 aa7.2□□□□□ -1.26
LSM8YJR022W DBP1P24784 617 aaKnown RBP7.19□□□□□ -1.26
LSM8YJR022W YFR006WP43590 535 aa7.17□□□□□ -1.26
LSM8YJR022W CST9Q06032 482 aa7.17□□□□□ -1.26
LSM8YJR022W NCR1Q12200 1170 aa7.17□□□□□ -1.26
LSM8YJR022W VMA1P17255 1071 aaKnown RBP7.16□□□□□ -1.26
LSM8YJR022W RTG3P38165 486 aa7.15□□□□□ -1.26
LSM8YJR022W STS1P38637 319 aa7.15□□□□□ -1.26
LSM8YJR022W YNL035CP53962 389 aaKnown RBP7.15□□□□□ -1.26
LSM8YJR022W SEC61P32915 480 aa7.14□□□□□ -1.27
LSM8YJR022W SAM3Q08986 587 aa7.13□□□□□ -1.27
LSM8YJR022W MGA2P40578 1113 aa7.1□□□□□ -1.27
LSM8YJR022W RCR1P38212 213 aa7.05□□□□□ -1.28
LSM8YJR022W TFG1P41895 735 aaPredicted RBP7.04□□□□□ -1.28
LSM8YJR022W DAN4P47179 1161 aa7.03□□□□□ -1.28
LSM8YJR022W JIP4Q03361 876 aa7.02□□□□□ -1.29
LSM8YJR022W ABP1P15891 592 aaKnown RBP7.01□□□□□ -1.29
LSM8YJR022W SAP30P38429 201 aa7.01□□□□□ -1.29
LSM8YJR022W GYP5Q12344 894 aa7□□□□□ -1.29
LSM8YJR022W YDL129WQ07555 291 aa6.98□□□□□ -1.29
LSM8YJR022W HTA1P04911 132 aaKnown RBP6.96□□□□□ -1.3
LSM8YJR022W HTA2P04912 132 aa6.96□□□□□ -1.3
LSM8YJR022W BCK2P33306 851 aa6.96□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms