RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C MRF1P30775 413 aaPredicted RBP7.15□□□□□ -1.26
TPM2YIL138C GCD11P32481 527 aaKnown RBP7.15□□□□□ -1.26
TPM2YIL138C AIR1P40507 360 aaKnown RBP7.15□□□□□ -1.26
TPM2YIL138C MVP1P40959 511 aaKnown RBP7.14□□□□□ -1.27
TPM2YIL138C NPL4P33755 580 aa7.13□□□□□ -1.27
TPM2YIL138C COX6P00427 148 aa7.12□□□□□ -1.27
TPM2YIL138C ERG12P07277 443 aa7.12□□□□□ -1.27
TPM2YIL138C YPR109WQ06104 294 aa7.11□□□□□ -1.27
TPM2YIL138C RGR1P19263 1082 aa7.09□□□□□ -1.27
TPM2YIL138C MAK21Q12176 1025 aaKnown RBP7.08□□□□□ -1.28
TPM2YIL138C SPT16P32558 1035 aaKnown RBP7.07□□□□□ -1.28
TPM2YIL138C RRN7P40992 514 aa7.07□□□□□ -1.28
TPM2YIL138C FRK1Q03002 865 aaPredicted RBP7.07□□□□□ -1.28
TPM2YIL138C ERF2Q06551 359 aa7.07□□□□□ -1.28
TPM2YIL138C LAM6Q08001 693 aa7.06□□□□□ -1.28
TPM2YIL138C KEX2P13134 814 aa7.04□□□□□ -1.28
TPM2YIL138C BDP1P46678 594 aa7.02□□□□□ -1.29
TPM2YIL138C BRE2P43132 505 aa7.01□□□□□ -1.29
TPM2YIL138C PBS2P08018 668 aa6.97□□□□□ -1.29
TPM2YIL138C GAR1P28007 205 aaKnown RBP6.97□□□□□ -1.29
TPM2YIL138C PAC1P39946 494 aaKnown RBP6.95□□□□□ -1.3
TPM2YIL138C CKB1P43639 278 aa6.95□□□□□ -1.3
TPM2YIL138C CDC4P07834 779 aa6.93□□□□□ -1.3
TPM2YIL138C PAT1P25644 796 aaKnown RBP6.93□□□□□ -1.3
TPM2YIL138C YPL062WQ02781 134 aa6.93□□□□□ -1.3
TPM2YIL138C GCR2Q01722 534 aa6.91□□□□□ -1.3
TPM2YIL138C AGE1Q04412 482 aa6.9□□□□□ -1.3
TPM2YIL138C PUS5Q06244 254 aa6.9□□□□□ -1.3
TPM2YIL138C PSE1P32337 1089 aaKnown RBP6.89□□□□□ -1.31
TPM2YIL138C TUB4P53378 473 aa6.88□□□□□ -1.31
TPM2YIL138C HED1Q03937 162 aa6.88□□□□□ -1.31
TPM2YIL138C GBP2P25555 427 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
TPM2YIL138C MOD5P07884 428 aa6.86□□□□□ -1.31
TPM2YIL138C IES2P40154 320 aa6.86□□□□□ -1.31
TPM2YIL138C MET32Q12041 191 aa6.86□□□□□ -1.31
TPM2YIL138C MAM3Q12296 706 aa6.86□□□□□ -1.31
TPM2YIL138C MET22P32179 357 aa6.85□□□□□ -1.31
TPM2YIL138C ASH1P34233 588 aa6.83□□□□□ -1.32
TPM2YIL138C CLB5P30283 435 aa6.82□□□□□ -1.32
TPM2YIL138C NUP42P49686 430 aaKnown RBP6.8□□□□□ -1.32
TPM2YIL138C YNL115CP53925 644 aa6.8□□□□□ -1.32
TPM2YIL138C NIS1P53939 407 aa6.8□□□□□ -1.32
TPM2YIL138C SAS10Q12136 610 aaPredicted RBP6.8□□□□□ -1.32
TPM2YIL138C DSF2P38213 736 aa6.78□□□□□ -1.32
TPM2YIL138C DMA1P38823 416 aa6.78□□□□□ -1.32
TPM2YIL138C SIT4P20604 311 aa6.77□□□□□ -1.33
TPM2YIL138C DIT2P21595 489 aa6.77□□□□□ -1.33
TPM2YIL138C TEA1P47988 759 aa6.77□□□□□ -1.33
TPM2YIL138C RTF1P53064 558 aa6.77□□□□□ -1.33
TPM2YIL138C ENV9Q08651 330 aa6.77□□□□□ -1.33
TPM2YIL138C YDR444WQ04093 687 aa6.76□□□□□ -1.33
TPM2YIL138C AFT1P22149 690 aa6.75□□□□□ -1.33
TPM2YIL138C HST3P53687 447 aa6.75□□□□□ -1.33
TPM2YIL138C SLY41P22215 453 aa6.72□□□□□ -1.33
TPM2YIL138C SPB4P25808 606 aaPredicted RBP6.72□□□□□ -1.33
TPM2YIL138C YJR115WP47152 169 aa6.72□□□□□ -1.33
TPM2YIL138C KXD1P53158 218 aa6.71□□□□□ -1.34
TPM2YIL138C FPK1P53739 893 aa6.71□□□□□ -1.34
TPM2YIL138C PDC1P06169 563 aaKnown RBP6.7□□□□□ -1.34
TPM2YIL138C SCJ1P25303 377 aa6.7□□□□□ -1.34
TPM2YIL138C HXT10P43581 546 aa6.7□□□□□ -1.34
TPM2YIL138C RRD1P40454 393 aaKnown RBP6.69□□□□□ -1.34
TPM2YIL138C LCB5Q06147 687 aaKnown RBP6.69□□□□□ -1.34
TPM2YIL138C YDL176WQ12027 708 aa6.69□□□□□ -1.34
TPM2YIL138C YMR196WQ04336 1088 aa6.67□□□□□ -1.34
TPM2YIL138C TPD3P31383 635 aa6.65□□□□□ -1.34
TPM2YIL138C SYH1Q02875 849 aaKnown RBP6.64□□□□□ -1.35
TPM2YIL138C YDL206WQ12424 762 aa6.64□□□□□ -1.35
TPM2YIL138C TRM1P15565 570 aaKnown RBP6.61□□□□□ -1.35
TPM2YIL138C TBF1Q02457 562 aa6.61□□□□□ -1.35
TPM2YIL138C KIP2P28743 706 aa6.6□□□□□ -1.35
TPM2YIL138C PUS6P53294 404 aa6.6□□□□□ -1.35
TPM2YIL138C UGA3P26370 528 aa6.59□□□□□ -1.35
TPM2YIL138C MSB3P48566 633 aaPredicted RBP6.59□□□□□ -1.35
TPM2YIL138C RPA14P50106 137 aa6.58□□□□□ -1.36
TPM2YIL138C YPR097WQ06839 1073 aa6.58□□□□□ -1.36
TPM2YIL138C ALR1Q08269 859 aa6.58□□□□□ -1.36
TPM2YIL138C ESS1P22696 170 aa6.57□□□□□ -1.36
TPM2YIL138C IXR1P33417 597 aa6.57□□□□□ -1.36
TPM2YIL138C PTK2P47116 818 aaKnown RBP6.57□□□□□ -1.36
TPM2YIL138C CAF120P53836 1060 aa6.57□□□□□ -1.36
TPM2YIL138C ITT1Q04638 464 aa6.57□□□□□ -1.36
TPM2YIL138C HST2P53686 357 aa6.56□□□□□ -1.36
TPM2YIL138C TYW1Q08960 810 aaKnown RBP6.56□□□□□ -1.36
TPM2YIL138C MMP1Q12372 583 aa6.56□□□□□ -1.36
TPM2YIL138C YJU3P28321 313 aa6.55□□□□□ -1.36
TPM2YIL138C OPT2Q06593 877 aa6.55□□□□□ -1.36
TPM2YIL138C SRF1Q12516 437 aa6.54□□□□□ -1.36
TPM2YIL138C ATF2P53296 535 aa6.52□□□□□ -1.37
TPM2YIL138C GLC3P32775 704 aa6.51□□□□□ -1.37
TPM2YIL138C MRT4P33201 236 aaKnown RBP6.51□□□□□ -1.37
TPM2YIL138C GLN1P32288 370 aaKnown RBP6.5□□□□□ -1.37
TPM2YIL138C ACO2P39533 789 aa6.5□□□□□ -1.37
TPM2YIL138C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
TPM2YIL138C YNR021WP53723 404 aaKnown RBP6.48□□□□□ -1.37
TPM2YIL138C KTR1P27810 393 aaKnown RBP6.47□□□□□ -1.37
TPM2YIL138C APP1P53933 587 aa6.47□□□□□ -1.37
TPM2YIL138C YIR007WP40566 764 aa6.46□□□□□ -1.38
TPM2YIL138C VAC17P25591 423 aa6.45□□□□□ -1.38
TPM2YIL138C RTT106P40161 455 aa6.45□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms