RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeastyeast

Gene FCF1, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FCF1YDR339C TY1A-ML1Q04706 440 aaKnown RBP7.99□□□□□ -1.13
FCF1YDR339C TY1A-BRQ12217 440 aa7.99□□□□□ -1.13
FCF1YDR339C TY1A-NL2Q12470 440 aa7.99□□□□□ -1.13
FCF1YDR339C TY1A-GR2Q12485 440 aa7.99□□□□□ -1.13
FCF1YDR339C PBS2P08018 668 aa7.96□□□□□ -1.14
FCF1YDR339C ERG12P07277 443 aa7.95□□□□□ -1.14
FCF1YDR339C CST6P40535 587 aa7.94□□□□□ -1.14
FCF1YDR339C SPT16P32558 1035 aaKnown RBP7.92□□□□□ -1.14
FCF1YDR339C ERF2Q06551 359 aa7.92□□□□□ -1.14
FCF1YDR339C DMA1P38823 416 aa7.91□□□□□ -1.14
FCF1YDR339C CKB1P43639 278 aa7.91□□□□□ -1.14
FCF1YDR339C CLA4P48562 842 aa7.91□□□□□ -1.14
FCF1YDR339C AIR1P40507 360 aaKnown RBP7.9□□□□□ -1.14
FCF1YDR339C RRN7P40992 514 aa7.9□□□□□ -1.14
FCF1YDR339C RQC2Q12532 1038 aaKnown RBP7.9□□□□□ -1.14
FCF1YDR339C KEX2P13134 814 aa7.89□□□□□ -1.15
FCF1YDR339C FRK1Q03002 865 aaPredicted RBP7.87□□□□□ -1.15
FCF1YDR339C LAM6Q08001 693 aa7.86□□□□□ -1.15
FCF1YDR339C MAM3Q12296 706 aa7.84□□□□□ -1.15
FCF1YDR339C PSE1P32337 1089 aaKnown RBP7.83□□□□□ -1.16
FCF1YDR339C BDP1P46678 594 aa7.82□□□□□ -1.16
FCF1YDR339C IES2P40154 320 aa7.81□□□□□ -1.16
FCF1YDR339C SAS10Q12136 610 aaPredicted RBP7.81□□□□□ -1.16
FCF1YDR339C PAT1P25644 796 aaKnown RBP7.79□□□□□ -1.16
FCF1YDR339C DSF2P38213 736 aa7.79□□□□□ -1.16
FCF1YDR339C RGA1P39083 1007 aa7.78□□□□□ -1.16
FCF1YDR339C PAC1P39946 494 aaKnown RBP7.78□□□□□ -1.16
FCF1YDR339C NUP42P49686 430 aaKnown RBP7.76□□□□□ -1.17
FCF1YDR339C SPB4P25808 606 aaPredicted RBP7.75□□□□□ -1.17
FCF1YDR339C AGE1Q04412 482 aa7.75□□□□□ -1.17
FCF1YDR339C BRE2P43132 505 aa7.74□□□□□ -1.17
FCF1YDR339C TUB4P53378 473 aa7.74□□□□□ -1.17
FCF1YDR339C DIT2P21595 489 aa7.73□□□□□ -1.17
FCF1YDR339C CLB5P30283 435 aa7.73□□□□□ -1.17
FCF1YDR339C CDC4P07834 779 aa7.71□□□□□ -1.18
FCF1YDR339C TEA1P47988 759 aa7.71□□□□□ -1.18
FCF1YDR339C MOD5P07884 428 aa7.7□□□□□ -1.18
FCF1YDR339C YNL115CP53925 644 aa7.7□□□□□ -1.18
FCF1YDR339C NIS1P53939 407 aa7.7□□□□□ -1.18
FCF1YDR339C PUS5Q06244 254 aa7.7□□□□□ -1.18
FCF1YDR339C GCR2Q01722 534 aa7.69□□□□□ -1.18
FCF1YDR339C HED1Q03937 162 aa7.69□□□□□ -1.18
FCF1YDR339C RGA2Q06407 1009 aa7.69□□□□□ -1.18
FCF1YDR339C SIT4P20604 311 aa7.68□□□□□ -1.18
FCF1YDR339C GAR1P28007 205 aaKnown RBP7.67□□□□□ -1.18
FCF1YDR339C RTF1P53064 558 aa7.66□□□□□ -1.18
FCF1YDR339C MET32Q12041 191 aa7.64□□□□□ -1.19
FCF1YDR339C FPK1P53739 893 aa7.62□□□□□ -1.19
FCF1YDR339C ASH1P34233 588 aa7.61□□□□□ -1.19
FCF1YDR339C SLY41P22215 453 aa7.6□□□□□ -1.19
FCF1YDR339C YPL062WQ02781 134 aa7.6□□□□□ -1.19
FCF1YDR339C SCJ1P25303 377 aa7.59□□□□□ -1.19
FCF1YDR339C MET22P32179 357 aa7.59□□□□□ -1.19
FCF1YDR339C GBP2P25555 427 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
FCF1YDR339C KXD1P53158 218 aa7.57□□□□□ -1.2
FCF1YDR339C YMR196WQ04336 1088 aa7.57□□□□□ -1.2
FCF1YDR339C PDC1P06169 563 aaKnown RBP7.55□□□□□ -1.2
FCF1YDR339C HXT10P43581 546 aa7.55□□□□□ -1.2
FCF1YDR339C AFT1P22149 690 aa7.54□□□□□ -1.2
FCF1YDR339C HST3P53687 447 aa7.54□□□□□ -1.2
FCF1YDR339C RRD1P40454 393 aaKnown RBP7.51□□□□□ -1.21
FCF1YDR339C TPD3P31383 635 aa7.5□□□□□ -1.21
FCF1YDR339C PUS6P53294 404 aa7.5□□□□□ -1.21
FCF1YDR339C ENV9Q08651 330 aa7.5□□□□□ -1.21
FCF1YDR339C YDL206WQ12424 762 aa7.5□□□□□ -1.21
FCF1YDR339C YJR115WP47152 169 aa7.49□□□□□ -1.21
FCF1YDR339C ATF2P53296 535 aa7.49□□□□□ -1.21
FCF1YDR339C YDR444WQ04093 687 aa7.49□□□□□ -1.21
FCF1YDR339C HST2P53686 357 aa7.48□□□□□ -1.21
FCF1YDR339C SYH1Q02875 849 aaKnown RBP7.48□□□□□ -1.21
FCF1YDR339C TRM1P15565 570 aaKnown RBP7.47□□□□□ -1.21
FCF1YDR339C TBF1Q02457 562 aa7.47□□□□□ -1.21
FCF1YDR339C MMP1Q12372 583 aa7.47□□□□□ -1.21
FCF1YDR339C ESS1P22696 170 aa7.46□□□□□ -1.22
FCF1YDR339C GLC3P32775 704 aa7.46□□□□□ -1.22
FCF1YDR339C RPA14P50106 137 aa7.46□□□□□ -1.22
FCF1YDR339C YPR097WQ06839 1073 aa7.45□□□□□ -1.22
FCF1YDR339C ALR1Q08269 859 aa7.45□□□□□ -1.22
FCF1YDR339C TYW1Q08960 810 aaKnown RBP7.45□□□□□ -1.22
FCF1YDR339C KIP2P28743 706 aa7.43□□□□□ -1.22
FCF1YDR339C LCB5Q06147 687 aaKnown RBP7.43□□□□□ -1.22
FCF1YDR339C YJU3P28321 313 aa7.42□□□□□ -1.22
FCF1YDR339C GLN1P32288 370 aaKnown RBP7.42□□□□□ -1.22
FCF1YDR339C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
FCF1YDR339C IXR1P33417 597 aa7.4□□□□□ -1.22
FCF1YDR339C YNR021WP53723 404 aaKnown RBP7.39□□□□□ -1.23
FCF1YDR339C YDL176WQ12027 708 aa7.39□□□□□ -1.23
FCF1YDR339C UGA3P26370 528 aa7.38□□□□□ -1.23
FCF1YDR339C MSB3P48566 633 aaPredicted RBP7.38□□□□□ -1.23
FCF1YDR339C KTR1P27810 393 aaKnown RBP7.37□□□□□ -1.23
FCF1YDR339C ITT1Q04638 464 aa7.37□□□□□ -1.23
FCF1YDR339C PTK2P47116 818 aaKnown RBP7.35□□□□□ -1.23
FCF1YDR339C MRT4P33201 236 aaKnown RBP7.33□□□□□ -1.24
FCF1YDR339C RSC30P38781 883 aa7.33□□□□□ -1.24
FCF1YDR339C PKH3Q03306 898 aaPredicted RBP7.32□□□□□ -1.24
FCF1YDR339C SRF1Q12516 437 aa7.32□□□□□ -1.24
FCF1YDR339C OPT2Q06593 877 aa7.31□□□□□ -1.24
FCF1YDR339C VAC17P25591 423 aa7.3□□□□□ -1.24
FCF1YDR339C ARG8P18544 423 aa7.29□□□□□ -1.24
FCF1YDR339C CAF120P53836 1060 aa7.29□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms