RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C TY1A-MR2P0CX69 440 aa6.39□□□□□ -1.39
SRD1YCR018C GCD11P32481 527 aaKnown RBP6.39□□□□□ -1.39
SRD1YCR018C SPT16P32558 1035 aaKnown RBP6.39□□□□□ -1.39
SRD1YCR018C NPL4P33755 580 aa6.39□□□□□ -1.39
SRD1YCR018C TY1A-JR2P47099 440 aa6.39□□□□□ -1.39
SRD1YCR018C FRK1Q03002 865 aaPredicted RBP6.39□□□□□ -1.39
SRD1YCR018C TY1A-DR1Q03856 440 aa6.39□□□□□ -1.39
SRD1YCR018C TY1A-ML1Q04706 440 aaKnown RBP6.39□□□□□ -1.39
SRD1YCR018C TY1A-BRQ12217 440 aa6.39□□□□□ -1.39
SRD1YCR018C TY1A-NL2Q12470 440 aa6.39□□□□□ -1.39
SRD1YCR018C TY1A-GR2Q12485 440 aa6.39□□□□□ -1.39
SRD1YCR018C SEC2P17065 759 aa6.38□□□□□ -1.39
SRD1YCR018C ENV9Q08651 330 aa6.36□□□□□ -1.39
SRD1YCR018C BDP1P46678 594 aa6.35□□□□□ -1.39
SRD1YCR018C RRN7P40992 514 aa6.31□□□□□ -1.4
SRD1YCR018C HED1Q03937 162 aa6.31□□□□□ -1.4
SRD1YCR018C IFH1P39520 1085 aa6.3□□□□□ -1.4
SRD1YCR018C YDR444WQ04093 687 aa6.3□□□□□ -1.4
SRD1YCR018C ORC6P38826 435 aa6.29□□□□□ -1.4
SRD1YCR018C PAT1P25644 796 aaKnown RBP6.27□□□□□ -1.41
SRD1YCR018C MVP1P40959 511 aaKnown RBP6.25□□□□□ -1.41
SRD1YCR018C REF2P42073 533 aaPredicted RBP6.25□□□□□ -1.41
SRD1YCR018C YDL176WQ12027 708 aa6.25□□□□□ -1.41
SRD1YCR018C ASH1P34233 588 aa6.23□□□□□ -1.41
SRD1YCR018C LCB5Q06147 687 aaKnown RBP6.23□□□□□ -1.41
SRD1YCR018C YPR109WQ06104 294 aa6.22□□□□□ -1.41
SRD1YCR018C MET32Q12041 191 aa6.22□□□□□ -1.41
SRD1YCR018C RGR1P19263 1082 aa6.19□□□□□ -1.42
SRD1YCR018C AFT1P22149 690 aa6.19□□□□□ -1.42
SRD1YCR018C ERF2Q06551 359 aa6.19□□□□□ -1.42
SRD1YCR018C KEX2P13134 814 aa6.18□□□□□ -1.42
SRD1YCR018C HST3P53687 447 aa6.17□□□□□ -1.42
SRD1YCR018C COX6P00427 148 aa6.16□□□□□ -1.42
SRD1YCR018C MOD5P07884 428 aa6.16□□□□□ -1.42
SRD1YCR018C PAC1P39946 494 aaKnown RBP6.15□□□□□ -1.42
SRD1YCR018C RRD1P40454 393 aaKnown RBP6.15□□□□□ -1.42
SRD1YCR018C YPR148CQ06523 435 aa6.15□□□□□ -1.42
SRD1YCR018C PUS5Q06244 254 aa6.14□□□□□ -1.43
SRD1YCR018C SAS10Q12136 610 aaPredicted RBP6.13□□□□□ -1.43
SRD1YCR018C MAK21Q12176 1025 aaKnown RBP6.13□□□□□ -1.43
SRD1YCR018C YJR115WP47152 169 aa6.12□□□□□ -1.43
SRD1YCR018C LEO1P38439 464 aa6.08□□□□□ -1.44
SRD1YCR018C MTC5Q03897 1148 aa6.08□□□□□ -1.44
SRD1YCR018C AGE1Q04412 482 aa6.08□□□□□ -1.44
SRD1YCR018C TUB4P53378 473 aa6.07□□□□□ -1.44
SRD1YCR018C VPS70P47161 811 aa6.06□□□□□ -1.44
SRD1YCR018C CAF120P53836 1060 aa6.05□□□□□ -1.44
SRD1YCR018C ACO2P39533 789 aa6.04□□□□□ -1.44
SRD1YCR018C LEU3P08638 886 aa6.03□□□□□ -1.44
SRD1YCR018C MSB3P48566 633 aaPredicted RBP6.02□□□□□ -1.45
SRD1YCR018C TRK2P28584 889 aa5.99□□□□□ -1.45
SRD1YCR018C CKB1P43639 278 aa5.98□□□□□ -1.45
SRD1YCR018C RTF1P53064 558 aa5.98□□□□□ -1.45
SRD1YCR018C OPT2Q06593 877 aa5.98□□□□□ -1.45
SRD1YCR018C SPB4P25808 606 aaPredicted RBP5.97□□□□□ -1.45
SRD1YCR018C PSE1P32337 1089 aaKnown RBP5.97□□□□□ -1.45
SRD1YCR018C YNL115CP53925 644 aa5.97□□□□□ -1.45
SRD1YCR018C KXD1P53158 218 aa5.96□□□□□ -1.46
SRD1YCR018C SYH1Q02875 849 aaKnown RBP5.96□□□□□ -1.46
SRD1YCR018C TAF7Q05021 590 aa5.96□□□□□ -1.46
SRD1YCR018C UGA3P26370 528 aa5.95□□□□□ -1.46
SRD1YCR018C CLB5P30283 435 aa5.95□□□□□ -1.46
SRD1YCR018C TPD3P31383 635 aa5.95□□□□□ -1.46
SRD1YCR018C PTK2P47116 818 aaKnown RBP5.95□□□□□ -1.46
SRD1YCR018C YGR035CP53222 116 aa5.95□□□□□ -1.46
SRD1YCR018C YLR346CQ06139 101 aa5.95□□□□□ -1.46
SRD1YCR018C HXT10P43581 546 aa5.94□□□□□ -1.46
SRD1YCR018C SRF1Q12516 437 aa5.93□□□□□ -1.46
SRD1YCR018C YIR007WP40566 764 aa5.91□□□□□ -1.46
SRD1YCR018C HPF1Q05164 967 aa5.91□□□□□ -1.46
SRD1YCR018C PDC1P06169 563 aaKnown RBP5.9□□□□□ -1.46
SRD1YCR018C SIT4P20604 311 aa5.9□□□□□ -1.46
SRD1YCR018C GLY1P37303 387 aaKnown RBP5.9□□□□□ -1.46
SRD1YCR018C RPN1P38764 993 aaKnown RBP5.89□□□□□ -1.47
SRD1YCR018C NUP85P46673 744 aa5.88□□□□□ -1.47
SRD1YCR018C PBS2P08018 668 aa5.87□□□□□ -1.47
SRD1YCR018C SCW11P53189 542 aa5.87□□□□□ -1.47
SRD1YCR018C TYW1Q08960 810 aaKnown RBP5.87□□□□□ -1.47
SRD1YCR018C TY1A-BLQ12266 440 aa5.86□□□□□ -1.47
SRD1YCR018C MIP1P15801 1254 aa5.85□□□□□ -1.47
SRD1YCR018C KIP2P28743 706 aa5.85□□□□□ -1.47
SRD1YCR018C MRT4P33201 236 aaKnown RBP5.83□□□□□ -1.48
SRD1YCR018C NIS1P53939 407 aa5.83□□□□□ -1.48
SRD1YCR018C IXR1P33417 597 aa5.82□□□□□ -1.48
SRD1YCR018C TEA1P47988 759 aa5.82□□□□□ -1.48
SRD1YCR018C DSF2P38213 736 aa5.81□□□□□ -1.48
SRD1YCR018C ICP55P40051 511 aa5.81□□□□□ -1.48
SRD1YCR018C SLY41P22215 453 aa5.8□□□□□ -1.48
SRD1YCR018C ALR1Q08269 859 aa5.8□□□□□ -1.48
SRD1YCR018C RPA14P50106 137 aa5.79□□□□□ -1.48
SRD1YCR018C YPR097WQ06839 1073 aa5.79□□□□□ -1.48
SRD1YCR018C YPR204WQ08995 1032 aa5.79□□□□□ -1.48
SRD1YCR018C RTT106P40161 455 aa5.78□□□□□ -1.48
SRD1YCR018C MAM3Q12296 706 aa5.78□□□□□ -1.48
SRD1YCR018C YDL206WQ12424 762 aa5.78□□□□□ -1.48
SRD1YCR018C LSB3P43603 459 aaKnown RBP5.77□□□□□ -1.49
SRD1YCR018C LSC2P53312 427 aa5.77□□□□□ -1.49
SRD1YCR018C UBP2Q01476 1272 aa5.76□□□□□ -1.49
SRD1YCR018C PUS1Q12211 544 aaKnown RBP5.76□□□□□ -1.49
SRD1YCR018C PUS6P53294 404 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms