RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C MTC1P47018 478 aaKnown RBP12.93□□□□□ -0.34
SRD1YCR018C FAP1P53971 965 aa12.66□□□□□ -0.38
SRD1YCR018C PRY3P47033 881 aa11.93□□□□□ -0.5
SRD1YCR018C AAD16Q02895 342 aa11.45□□□□□ -0.58
SRD1YCR018C PRI1P10363 409 aa11.41□□□□□ -0.58
SRD1YCR018C YCK3P39962 524 aa11.25□□□□□ -0.61
SRD1YCR018C DRS1P32892 752 aaKnown RBP11.18□□□□□ -0.62
SRD1YCR018C HAA1Q12753 694 aaKnown RBP11.13□□□□□ -0.63
SRD1YCR018C ISW2Q08773 1120 aa10.91□□□□□ -0.66
SRD1YCR018C RPG1P38249 964 aaKnown RBP10.83□□□□□ -0.68
SRD1YCR018C TSR3Q12094 313 aaKnown RBP10.75□□□□□ -0.69
SRD1YCR018C MRPL32P25348 183 aa10.32□□□□□ -0.76
SRD1YCR018C YGL015CP33199 130 aa10.15□□□□□ -0.78
SRD1YCR018C DIP2Q12220 943 aaPredicted RBP10.13□□□□□ -0.79
SRD1YCR018C RSE1Q04693 1361 aaKnown RBP10.04□□□□□ -0.8
SRD1YCR018C REB1P21538 810 aa9.82□□□□□ -0.84
SRD1YCR018C RPL17AP05740 184 aaKnown RBP9.78□□□□□ -0.84
SRD1YCR018C RPL17BP46990 184 aaKnown RBP9.78□□□□□ -0.84
SRD1YCR018C BUD31P25337 157 aaPredicted RBP9.69□□□□□ -0.86
SRD1YCR018C CDC27P38042 758 aa9.65□□□□□ -0.86
SRD1YCR018C AVT3P36062 692 aa9.51□□□□□ -0.89
SRD1YCR018C UBP10P53874 792 aaPredicted RBP9.48□□□□□ -0.89
SRD1YCR018C MAP2P38174 421 aaKnown RBP9.45□□□□□ -0.9
SRD1YCR018C YKR023WP36119 530 aaKnown RBP9.41□□□□□ -0.9
SRD1YCR018C SPT21P35209 758 aa9.29□□□□□ -0.92
SRD1YCR018C HOP09932 586 aa9.22□□□□□ -0.93
SRD1YCR018C DCD1P06773 312 aa9.21□□□□□ -0.94
SRD1YCR018C TFC8Q12308 588 aa9.21□□□□□ -0.94
SRD1YCR018C SIS1P25294 352 aaKnown RBP9.15□□□□□ -0.94
SRD1YCR018C SCY1P53009 804 aa9.1□□□□□ -0.95
SRD1YCR018C TIF4632P39936 914 aaKnown RBP9.09□□□□□ -0.95
SRD1YCR018C UBP9P39967 754 aa9.07□□□□□ -0.96
SRD1YCR018C TGL3P40308 642 aa9.07□□□□□ -0.96
SRD1YCR018C SLX5P32828 619 aaKnown RBP9.03□□□□□ -0.96
SRD1YCR018C BCH2P36122 765 aa8.88□□□□□ -0.99
SRD1YCR018C BFR2Q06631 534 aaKnown RBP8.85□□□□□ -0.99
SRD1YCR018C RIM101P33400 625 aa8.78□□□□□ -1
SRD1YCR018C YBL029C-AQ3E756 94 aa8.6□□□□□ -1.03
SRD1YCR018C MST1P07236 462 aa8.59□□□□□ -1.03
SRD1YCR018C EPS1P40557 701 aa8.59□□□□□ -1.03
SRD1YCR018C BDF1P35817 686 aa8.58□□□□□ -1.04
SRD1YCR018C YOR238WQ08634 303 aa8.52□□□□□ -1.05
SRD1YCR018C VNX1P42839 908 aa8.47□□□□□ -1.05
SRD1YCR018C OXP1P28273 1286 aa8.46□□□□□ -1.06
SRD1YCR018C NSR1P27476 414 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
SRD1YCR018C SPP1Q03012 353 aa8.39□□□□□ -1.07
SRD1YCR018C PTP3P40048 928 aa8.35□□□□□ -1.07
SRD1YCR018C WSC3Q12215 556 aa8.34□□□□□ -1.07
SRD1YCR018C YIL055CP40523 627 aaKnown RBP8.33□□□□□ -1.08
SRD1YCR018C YAP5P40574 245 aa8.32□□□□□ -1.08
SRD1YCR018C AIR2Q12476 344 aaKnown RBP8.3□□□□□ -1.08
SRD1YCR018C YJL171CP46992 396 aa8.27□□□□□ -1.09
SRD1YCR018C BBC1P47068 1157 aa8.26□□□□□ -1.09
SRD1YCR018C TIF11P38912 153 aaKnown RBP8.24□□□□□ -1.09
SRD1YCR018C FKH1P40466 484 aa8.24□□□□□ -1.09
SRD1YCR018C AI2P03876 854 aa8.21□□□□□ -1.1
SRD1YCR018C RSM7P47150 247 aa8.21□□□□□ -1.1
SRD1YCR018C GTT3P39996 337 aa8.17□□□□□ -1.1
SRD1YCR018C LDB19Q12502 818 aa8.13□□□□□ -1.11
SRD1YCR018C ULI1P43604 169 aa8.09□□□□□ -1.11
SRD1YCR018C IOC2Q12072 812 aa8.09□□□□□ -1.11
SRD1YCR018C YAH1Q12184 172 aaKnown RBP8.08□□□□□ -1.12
SRD1YCR018C BMT6Q12291 365 aa8.08□□□□□ -1.12
SRD1YCR018C PIB1Q06651 286 aa8.03□□□□□ -1.12
SRD1YCR018C MSB4Q12317 492 aa7.94□□□□□ -1.14
SRD1YCR018C EAP1P36041 632 aaKnown RBP7.92□□□□□ -1.14
SRD1YCR018C YLR271WQ06152 274 aa7.91□□□□□ -1.14
SRD1YCR018C RTG1P32607 177 aa7.9□□□□□ -1.14
SRD1YCR018C TFA1P36100 482 aa7.89□□□□□ -1.15
SRD1YCR018C PSD2P53037 1138 aaKnown RBP7.89□□□□□ -1.15
SRD1YCR018C NCR1Q12200 1170 aa7.88□□□□□ -1.15
SRD1YCR018C MRM1P25270 412 aa7.87□□□□□ -1.15
SRD1YCR018C TRP5P00931 707 aaKnown RBP7.86□□□□□ -1.15
SRD1YCR018C SET4P42948 560 aa7.86□□□□□ -1.15
SRD1YCR018C YOL036WQ08206 761 aa7.86□□□□□ -1.15
SRD1YCR018C YNL035CP53962 389 aaKnown RBP7.8□□□□□ -1.16
SRD1YCR018C SEC61P32915 480 aa7.79□□□□□ -1.16
SRD1YCR018C DBP1P24784 617 aaKnown RBP7.74□□□□□ -1.17
SRD1YCR018C YMR1P47147 688 aaKnown RBP RIP-Chip data7.74□□□□□ -1.17not detected
SRD1YCR018C VMA1P17255 1071 aaKnown RBP7.71□□□□□ -1.18
SRD1YCR018C VPS29P38759 282 aa7.71□□□□□ -1.18
SRD1YCR018C YFR006WP43590 535 aa7.71□□□□□ -1.18
SRD1YCR018C TFG1P41895 735 aaPredicted RBP7.7□□□□□ -1.18
SRD1YCR018C SAM3Q08986 587 aa7.69□□□□□ -1.18
SRD1YCR018C BCK2P33306 851 aa7.67□□□□□ -1.18
SRD1YCR018C SAP30P38429 201 aa7.67□□□□□ -1.18
SRD1YCR018C STS1P38637 319 aa7.65□□□□□ -1.18
SRD1YCR018C DAN4P47179 1161 aa7.64□□□□□ -1.19
SRD1YCR018C RTG3P38165 486 aa7.63□□□□□ -1.19
SRD1YCR018C CHL1P22516 861 aaPredicted RBP7.62□□□□□ -1.19
SRD1YCR018C JIP4Q03361 876 aa7.61□□□□□ -1.19
SRD1YCR018C YDL129WQ07555 291 aa7.6□□□□□ -1.19
SRD1YCR018C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19not detected
SRD1YCR018C CST9Q06032 482 aa7.59□□□□□ -1.19
SRD1YCR018C PRE3P38624 215 aa7.57□□□□□ -1.2
SRD1YCR018C SSP1P38871 571 aa7.57□□□□□ -1.2
SRD1YCR018C ABP1P15891 592 aaKnown RBP7.54□□□□□ -1.2
SRD1YCR018C GYP5Q12344 894 aa7.54□□□□□ -1.2
SRD1YCR018C HTA1P04911 132 aaKnown RBP7.52□□□□□ -1.21
SRD1YCR018C HTA2P04912 132 aa7.52□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms