RNA–Protein interactions for RNA: YBR061C

TRM7, Transcript of 2'-O-ribose methyltransferase, yeast

Gene TRM7, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM7	YBR061C	MET22	P32179	357 aa		4.76	□□□□□ -1.65
TRM7	YBR061C	ERG12	P07277	443 aa		4.75	□□□□□ -1.65
TRM7	YBR061C	NUD1	P32336	851 aa		4.75	□□□□□ -1.65
TRM7	YBR061C	CKB1	P43639	278 aa		4.75	□□□□□ -1.65
TRM7	YBR061C	GCR2	Q01722	534 aa		4.74	□□□□□ -1.65
TRM7	YBR061C	CDC4	P07834	779 aa		4.73	□□□□□ -1.65
TRM7	YBR061C	SPB4	P25808	606 aa	Predicted RBP	4.73	□□□□□ -1.65
TRM7	YBR061C	RPP1B	P10622	106 aa	Known RBP	4.72	□□□□□ -1.65
TRM7	YBR061C	CSC1	Q06538	782 aa		4.72	□□□□□ -1.65
TRM7	YBR061C	TFB4	Q12004	338 aa		4.72	□□□□□ -1.65
TRM7	YBR061C	ENV9	Q08651	330 aa		4.71	□□□□□ -1.66
TRM7	YBR061C	TUM1	Q08686	304 aa	Known RBP	4.71	□□□□□ -1.66
TRM7	YBR061C	YDL176W	Q12027	708 aa		4.71	□□□□□ -1.66
TRM7	YBR061C	REF2	P42073	533 aa	Predicted RBP	4.7	□□□□□ -1.66
TRM7	YBR061C	PBS2	P08018	668 aa		4.69	□□□□□ -1.66
TRM7	YBR061C	ORC6	P38826	435 aa		4.69	□□□□□ -1.66
TRM7	YBR061C	BDP1	P46678	594 aa		4.69	□□□□□ -1.66
TRM7	YBR061C	PEX21	P50091	288 aa		4.68	□□□□□ -1.66
TRM7	YBR061C	FRK1	Q03002	865 aa	Predicted RBP	4.68	□□□□□ -1.66
TRM7	YBR061C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
TRM7	YBR061C	GCD11	P32481	527 aa	Known RBP	4.67	□□□□□ -1.66
TRM7	YBR061C	LEO1	P38439	464 aa		4.67	□□□□□ -1.66
TRM7	YBR061C	TAF7	Q05021	590 aa		4.67	□□□□□ -1.66
TRM7	YBR061C	LEU3	P08638	886 aa		4.66	□□□□□ -1.66
TRM7	YBR061C	HED1	Q03937	162 aa		4.66	□□□□□ -1.66
TRM7	YBR061C	SPT16	P32558	1035 aa	Known RBP	4.65	□□□□□ -1.67
TRM7	YBR061C	DSF2	P38213	736 aa		4.64	□□□□□ -1.67
TRM7	YBR061C	YDR444W	Q04093	687 aa		4.64	□□□□□ -1.67
TRM7	YBR061C	KIC1	P38692	1080 aa		4.63	□□□□□ -1.67
TRM7	YBR061C	MVP1	P40959	511 aa	Known RBP	4.63	□□□□□ -1.67
TRM7	YBR061C	RRN7	P40992	514 aa		4.63	□□□□□ -1.67
TRM7	YBR061C	LCB5	Q06147	687 aa	Known RBP	4.63	□□□□□ -1.67
TRM7	YBR061C	ERF2	Q06551	359 aa		4.63	□□□□□ -1.67
TRM7	YBR061C	MET32	Q12041	191 aa		4.63	□□□□□ -1.67
TRM7	YBR061C	MAK21	Q12176	1025 aa	Known RBP	4.63	□□□□□ -1.67
TRM7	YBR061C	MAM3	Q12296	706 aa		4.63	□□□□□ -1.67
TRM7	YBR061C	COX6	P00427	148 aa		4.62	□□□□□ -1.67
TRM7	YBR061C	MOD5	P07884	428 aa		4.62	□□□□□ -1.67
TRM7	YBR061C	NPL4	P33755	580 aa		4.62	□□□□□ -1.67
TRM7	YBR061C	IES2	P40154	320 aa		4.61	□□□□□ -1.67
TRM7	YBR061C	ASH1	P34233	588 aa		4.6	□□□□□ -1.67
TRM7	YBR061C	RGR1	P19263	1082 aa		4.59	□□□□□ -1.67
TRM7	YBR061C	AFT1	P22149	690 aa		4.58	□□□□□ -1.68
TRM7	YBR061C	YPR109W	Q06104	294 aa		4.58	□□□□□ -1.68
TRM7	YBR061C	RRD1	P40454	393 aa	Known RBP	4.57	□□□□□ -1.68
TRM7	YBR061C	KEX2	P13134	814 aa		4.56	□□□□□ -1.68
TRM7	YBR061C	DIT2	P21595	489 aa		4.56	□□□□□ -1.68
TRM7	YBR061C	PAC1	P39946	494 aa	Known RBP	4.56	□□□□□ -1.68
TRM7	YBR061C	AGE1	Q04412	482 aa		4.56	□□□□□ -1.68
TRM7	YBR061C	RPN1	P38764	993 aa	Known RBP	4.55	□□□□□ -1.68
TRM7	YBR061C	NUP42	P49686	430 aa	Known RBP	4.55	□□□□□ -1.68
TRM7	YBR061C	GLC3	P32775	704 aa		4.53	□□□□□ -1.68
TRM7	YBR061C	YJR115W	P47152	169 aa		4.53	□□□□□ -1.68
TRM7	YBR061C	YNR021W	P53723	404 aa	Known RBP	4.53	□□□□□ -1.68
TRM7	YBR061C	PUS5	Q06244	254 aa		4.53	□□□□□ -1.68
TRM7	YBR061C	PAT1	P25644	796 aa	Known RBP	4.52	□□□□□ -1.69
TRM7	YBR061C	ACO2	P39533	789 aa		4.51	□□□□□ -1.69
TRM7	YBR061C	ATF2	P53296	535 aa		4.5	□□□□□ -1.69
TRM7	YBR061C	TUB4	P53378	473 aa		4.5	□□□□□ -1.69
TRM7	YBR061C	PSE1	P32337	1089 aa	Known RBP	4.49	□□□□□ -1.69
TRM7	YBR061C	HST3	P53687	447 aa		4.49	□□□□□ -1.69
TRM7	YBR061C	MTC5	Q03897	1148 aa		4.49	□□□□□ -1.69
TRM7	YBR061C	KIN1	P13185	1064 aa		4.47	□□□□□ -1.69
TRM7	YBR061C	AIM7	Q12156	149 aa		4.47	□□□□□ -1.69
TRM7	YBR061C	CAF120	P53836	1060 aa		4.46	□□□□□ -1.7
TRM7	YBR061C	TPD3	P31383	635 aa		4.44	□□□□□ -1.7
TRM7	YBR061C	TEA1	P47988	759 aa		4.44	□□□□□ -1.7
TRM7	YBR061C	MSB3	P48566	633 aa	Predicted RBP	4.43	□□□□□ -1.7
TRM7	YBR061C	OPT2	Q06593	877 aa		4.43	□□□□□ -1.7
TRM7	YBR061C	TRK2	P28584	889 aa		4.42	□□□□□ -1.7
TRM7	YBR061C	CLB5	P30283	435 aa		4.42	□□□□□ -1.7
TRM7	YBR061C	RTF1	P53064	558 aa		4.41	□□□□□ -1.7
TRM7	YBR061C	SIT4	P20604	311 aa		4.4	□□□□□ -1.71
TRM7	YBR061C	PTK2	P47116	818 aa	Known RBP	4.39	□□□□□ -1.71
TRM7	YBR061C	YNL115C	P53925	644 aa		4.39	□□□□□ -1.71
TRM7	YBR061C	YMR196W	Q04336	1088 aa		4.39	□□□□□ -1.71
TRM7	YBR061C	YIR007W	P40566	764 aa		4.38	□□□□□ -1.71
TRM7	YBR061C	HXT10	P43581	546 aa		4.38	□□□□□ -1.71
TRM7	YBR061C	NIS1	P53939	407 aa		4.38	□□□□□ -1.71
TRM7	YBR061C	HPF1	Q05164	967 aa		4.38	□□□□□ -1.71
TRM7	YBR061C	PDC1	P06169	563 aa	Known RBP	4.37	□□□□□ -1.71
TRM7	YBR061C	GLY1	P37303	387 aa	Known RBP	4.37	□□□□□ -1.71
TRM7	YBR061C	GUA1	P38625	525 aa	Known RBP	4.37	□□□□□ -1.71
TRM7	YBR061C	FPK1	P53739	893 aa		4.37	□□□□□ -1.71
TRM7	YBR061C	CSN12	P47130	423 aa		4.36	□□□□□ -1.71
TRM7	YBR061C	YGR035C	P53222	116 aa		4.36	□□□□□ -1.71
TRM7	YBR061C	DMA2	P53924	522 aa		4.36	□□□□□ -1.71
TRM7	YBR061C	TY1A-BL	Q12266	440 aa		4.36	□□□□□ -1.71
TRM7	YBR061C	MRT4	P33201	236 aa	Known RBP	4.35	□□□□□ -1.71
TRM7	YBR061C	SYH1	Q02875	849 aa	Known RBP	4.35	□□□□□ -1.71
TRM7	YBR061C	TYW1	Q08960	810 aa	Known RBP	4.35	□□□□□ -1.71
TRM7	YBR061C	SCJ1	P25303	377 aa		4.34	□□□□□ -1.71
TRM7	YBR061C	NUP85	P46673	744 aa		4.34	□□□□□ -1.71
TRM7	YBR061C	KXD1	P53158	218 aa		4.34	□□□□□ -1.71
TRM7	YBR061C	SSA2	P10592	639 aa	Known RBP	4.33	□□□□□ -1.72
TRM7	YBR061C	KTR1	P27810	393 aa	Known RBP	4.33	□□□□□ -1.72
TRM7	YBR061C	GLN1	P32288	370 aa	Known RBP	4.33	□□□□□ -1.72
TRM7	YBR061C	HST2	P53686	357 aa		4.33	□□□□□ -1.72
TRM7	YBR061C	MMP1	Q12372	583 aa		4.33	□□□□□ -1.72
TRM7	YBR061C	ESS1	P22696	170 aa		4.32	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms