RNA–Protein interactions for RNA: YBR061C

TRM7, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM7, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM7YBR061C MTC1P47018 478 aaKnown RBP9.61□□□□□ -0.87
TRM7YBR061C FAP1P53971 965 aa9.33□□□□□ -0.92
TRM7YBR061C PRY3P47033 881 aa8.84□□□□□ -0.99
TRM7YBR061C YCK3P39962 524 aa8.57□□□□□ -1.04
TRM7YBR061C PRI1P10363 409 aa8.53□□□□□ -1.04
TRM7YBR061C AAD16Q02895 342 aa8.53□□□□□ -1.04
TRM7YBR061C HAA1Q12753 694 aaKnown RBP8.27□□□□□ -1.09
TRM7YBR061C DRS1P32892 752 aaKnown RBP8.21□□□□□ -1.1
TRM7YBR061C RPG1P38249 964 aaKnown RBP8.04□□□□□ -1.12
TRM7YBR061C ISW2Q08773 1120 aa8.04□□□□□ -1.12
TRM7YBR061C TSR3Q12094 313 aaKnown RBP8□□□□□ -1.13
TRM7YBR061C MRPL32P25348 183 aa7.62□□□□□ -1.19
TRM7YBR061C YGL015CP33199 130 aa7.53□□□□□ -1.2
TRM7YBR061C DIP2Q12220 943 aaPredicted RBP7.48□□□□□ -1.21
TRM7YBR061C RSE1Q04693 1361 aaKnown RBP7.41□□□□□ -1.22
TRM7YBR061C BUD31P25337 157 aaPredicted RBP7.26□□□□□ -1.25
TRM7YBR061C CDC27P38042 758 aa7.24□□□□□ -1.25
TRM7YBR061C RPL17AP05740 184 aaKnown RBP7.23□□□□□ -1.25
TRM7YBR061C RPL17BP46990 184 aaKnown RBP7.23□□□□□ -1.25
TRM7YBR061C REB1P21538 810 aa7.19□□□□□ -1.26
TRM7YBR061C AVT3P36062 692 aa7.09□□□□□ -1.27
TRM7YBR061C YKR023WP36119 530 aaKnown RBP7.06□□□□□ -1.28
TRM7YBR061C MAP2P38174 421 aaKnown RBP7.05□□□□□ -1.28
TRM7YBR061C UBP10P53874 792 aaPredicted RBP7.05□□□□□ -1.28
TRM7YBR061C SPT21P35209 758 aa6.97□□□□□ -1.29
TRM7YBR061C TFC8Q12308 588 aa6.88□□□□□ -1.31
TRM7YBR061C DCD1P06773 312 aa6.85□□□□□ -1.31
TRM7YBR061C HOP09932 586 aa6.85□□□□□ -1.31
TRM7YBR061C SIS1P25294 352 aaKnown RBP6.76□□□□□ -1.33
TRM7YBR061C TGL3P40308 642 aa6.76□□□□□ -1.33
TRM7YBR061C SCY1P53009 804 aa6.75□□□□□ -1.33
TRM7YBR061C BFR2Q06631 534 aaKnown RBP6.74□□□□□ -1.33
TRM7YBR061C TIF4632P39936 914 aaKnown RBP6.68□□□□□ -1.34
TRM7YBR061C SLX5P32828 619 aaKnown RBP6.67□□□□□ -1.34
TRM7YBR061C UBP9P39967 754 aa6.67□□□□□ -1.34
TRM7YBR061C BCH2P36122 765 aa6.63□□□□□ -1.35
TRM7YBR061C RIM101P33400 625 aa6.55□□□□□ -1.36
TRM7YBR061C MST1P07236 462 aa6.46□□□□□ -1.38
TRM7YBR061C BDF1P35817 686 aa6.39□□□□□ -1.39
TRM7YBR061C YBL029C-AQ3E756 94 aa6.39□□□□□ -1.39
TRM7YBR061C EPS1P40557 701 aa6.38□□□□□ -1.39
TRM7YBR061C OXP1P28273 1286 aa6.35□□□□□ -1.39
TRM7YBR061C VNX1P42839 908 aa6.32□□□□□ -1.4
TRM7YBR061C YOR238WQ08634 303 aa6.3□□□□□ -1.4
TRM7YBR061C NSR1P27476 414 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
TRM7YBR061C TFA1P36100 482 aa6.25□□□□□ -1.41
TRM7YBR061C AIR2Q12476 344 aaKnown RBP6.23□□□□□ -1.41
TRM7YBR061C SPP1Q03012 353 aa6.19□□□□□ -1.42
TRM7YBR061C FKH1P40466 484 aa6.17□□□□□ -1.42
TRM7YBR061C YAP5P40574 245 aa6.15□□□□□ -1.42
TRM7YBR061C WSC3Q12215 556 aa6.15□□□□□ -1.42
TRM7YBR061C TIF11P38912 153 aaKnown RBP6.12□□□□□ -1.43
TRM7YBR061C PTP3P40048 928 aa6.1□□□□□ -1.43
TRM7YBR061C AI2P03876 854 aa6.08□□□□□ -1.44
TRM7YBR061C YIL055CP40523 627 aaKnown RBP6.08□□□□□ -1.44
TRM7YBR061C RSM7P47150 247 aa6.08□□□□□ -1.44
TRM7YBR061C IOC2Q12072 812 aa6.06□□□□□ -1.44
TRM7YBR061C YJL171CP46992 396 aa6.05□□□□□ -1.44
TRM7YBR061C BBC1P47068 1157 aa6.05□□□□□ -1.44
TRM7YBR061C LDB19Q12502 818 aa6.02□□□□□ -1.45
TRM7YBR061C ULI1P43604 169 aa5.99□□□□□ -1.45
TRM7YBR061C BMT6Q12291 365 aa5.97□□□□□ -1.45
TRM7YBR061C GTT3P39996 337 aa5.96□□□□□ -1.46
TRM7YBR061C PIB1Q06651 286 aa5.94□□□□□ -1.46
TRM7YBR061C YAH1Q12184 172 aaKnown RBP5.92□□□□□ -1.46
TRM7YBR061C PSD2P53037 1138 aaKnown RBP5.9□□□□□ -1.46
TRM7YBR061C YLR271WQ06152 274 aa5.9□□□□□ -1.46
TRM7YBR061C MSB4Q12317 492 aa5.87□□□□□ -1.47
TRM7YBR061C RTG1P32607 177 aa5.85□□□□□ -1.47
TRM7YBR061C TRP5P00931 707 aaKnown RBP5.84□□□□□ -1.47
TRM7YBR061C YOL036WQ08206 761 aa5.84□□□□□ -1.47
TRM7YBR061C EAP1P36041 632 aaKnown RBP5.82□□□□□ -1.48
TRM7YBR061C NCR1Q12200 1170 aa5.82□□□□□ -1.48
TRM7YBR061C MRM1P25270 412 aa5.81□□□□□ -1.48
TRM7YBR061C SET4P42948 560 aa5.81□□□□□ -1.48
TRM7YBR061C SEC61P32915 480 aa5.78□□□□□ -1.48
TRM7YBR061C VPS29P38759 282 aa5.78□□□□□ -1.48
TRM7YBR061C YNL035CP53962 389 aaKnown RBP5.78□□□□□ -1.48
TRM7YBR061C SAM3Q08986 587 aa5.75□□□□□ -1.49
TRM7YBR061C DAN4P47179 1161 aa5.74□□□□□ -1.49
TRM7YBR061C VMA1P17255 1071 aaKnown RBP5.73□□□□□ -1.49
TRM7YBR061C DBP1P24784 617 aaKnown RBP5.73□□□□□ -1.49
TRM7YBR061C STS1P38637 319 aa5.73□□□□□ -1.49
TRM7YBR061C YMR1P47147 688 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
TRM7YBR061C YFR006WP43590 535 aa5.7□□□□□ -1.5
TRM7YBR061C BCK2P33306 851 aa5.67□□□□□ -1.5
TRM7YBR061C SAP30P38429 201 aa5.67□□□□□ -1.5
TRM7YBR061C CST9Q06032 482 aa5.65□□□□□ -1.5
TRM7YBR061C CHL1P22516 861 aaPredicted RBP5.64□□□□□ -1.51
TRM7YBR061C JIP4Q03361 876 aa5.63□□□□□ -1.51
TRM7YBR061C RTG3P38165 486 aa5.62□□□□□ -1.51
TRM7YBR061C PRE3P38624 215 aa5.62□□□□□ -1.51
TRM7YBR061C YDL129WQ07555 291 aa5.62□□□□□ -1.51
TRM7YBR061C RCR1P38212 213 aa5.61□□□□□ -1.51
TRM7YBR061C YDR344CQ05510 147 aa5.61□□□□□ -1.51
TRM7YBR061C TFG1P41895 735 aaPredicted RBP5.59□□□□□ -1.51
TRM7YBR061C SSP1P38871 571 aa5.57□□□□□ -1.52
TRM7YBR061C PTC4P38089 393 aa5.56□□□□□ -1.52
TRM7YBR061C GYP5Q12344 894 aa5.56□□□□□ -1.52
TRM7YBR061C ABP1P15891 592 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms