RNA–Protein interactions for RNA: YBR039W

ATP3, Transcript of Gamma subunit of the F1 sector of mitochondrial F1F0 ATP synthase, yeastyeast

Gene ATP3, Length 936 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATP3YBR039W SEC2P17065 759 aa6□□□□□ -1.45
ATP3YBR039W PAT1P25644 796 aaKnown RBP6□□□□□ -1.45
ATP3YBR039W CKB1P43639 278 aa6□□□□□ -1.45
ATP3YBR039W TY1A-JR2P47099 440 aa6□□□□□ -1.45
ATP3YBR039W TY1A-DR1Q03856 440 aa6□□□□□ -1.45
ATP3YBR039W TY1A-ML1Q04706 440 aaKnown RBP6□□□□□ -1.45
ATP3YBR039W TY1A-BRQ12217 440 aa6□□□□□ -1.45
ATP3YBR039W TY1A-NL2Q12470 440 aa6□□□□□ -1.45
ATP3YBR039W TY1A-GR2Q12485 440 aa6□□□□□ -1.45
ATP3YBR039W CST6P40535 587 aa5.99□□□□□ -1.45
ATP3YBR039W RRN7P40992 514 aa5.99□□□□□ -1.45
ATP3YBR039W FRK1Q03002 865 aaPredicted RBP5.99□□□□□ -1.45
ATP3YBR039W KEX2P13134 814 aa5.96□□□□□ -1.46
ATP3YBR039W AIR1P40507 360 aaKnown RBP5.96□□□□□ -1.46
ATP3YBR039W CLA4P48562 842 aa5.96□□□□□ -1.46
ATP3YBR039W LAM6Q08001 693 aa5.94□□□□□ -1.46
ATP3YBR039W RGA1P39083 1007 aa5.93□□□□□ -1.46
ATP3YBR039W BDP1P46678 594 aa5.93□□□□□ -1.46
ATP3YBR039W GCR2Q01722 534 aa5.93□□□□□ -1.46
ATP3YBR039W ERF2Q06551 359 aa5.93□□□□□ -1.46
ATP3YBR039W MAM3Q12296 706 aa5.93□□□□□ -1.46
ATP3YBR039W PSE1P32337 1089 aaKnown RBP5.92□□□□□ -1.46
ATP3YBR039W DMA1P38823 416 aa5.91□□□□□ -1.46
ATP3YBR039W BRE2P43132 505 aa5.91□□□□□ -1.46
ATP3YBR039W GBP2P25555 427 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
ATP3YBR039W GAR1P28007 205 aaKnown RBP5.88□□□□□ -1.47
ATP3YBR039W CLB5P30283 435 aa5.88□□□□□ -1.47
ATP3YBR039W CDC4P07834 779 aa5.87□□□□□ -1.47
ATP3YBR039W SPB4P25808 606 aaPredicted RBP5.87□□□□□ -1.47
ATP3YBR039W IES2P40154 320 aa5.87□□□□□ -1.47
ATP3YBR039W PAC1P39946 494 aaKnown RBP5.86□□□□□ -1.47
ATP3YBR039W HED1Q03937 162 aa5.85□□□□□ -1.47
ATP3YBR039W DSF2P38213 736 aa5.84□□□□□ -1.47
ATP3YBR039W TEA1P47988 759 aa5.84□□□□□ -1.47
ATP3YBR039W TUB4P53378 473 aa5.84□□□□□ -1.47
ATP3YBR039W RGA2Q06407 1009 aa5.84□□□□□ -1.47
ATP3YBR039W YNL115CP53925 644 aa5.83□□□□□ -1.48
ATP3YBR039W PUS5Q06244 254 aa5.82□□□□□ -1.48
ATP3YBR039W SAS10Q12136 610 aaPredicted RBP5.82□□□□□ -1.48
ATP3YBR039W RTF1P53064 558 aa5.81□□□□□ -1.48
ATP3YBR039W NUP42P49686 430 aaKnown RBP5.8□□□□□ -1.48
ATP3YBR039W AGE1Q04412 482 aa5.8□□□□□ -1.48
ATP3YBR039W MOD5P07884 428 aa5.79□□□□□ -1.48
ATP3YBR039W ASH1P34233 588 aa5.79□□□□□ -1.48
ATP3YBR039W YPL062WQ02781 134 aa5.79□□□□□ -1.48
ATP3YBR039W DIT2P21595 489 aa5.78□□□□□ -1.48
ATP3YBR039W HST3P53687 447 aa5.78□□□□□ -1.48
ATP3YBR039W NIS1P53939 407 aa5.78□□□□□ -1.48
ATP3YBR039W KXD1P53158 218 aa5.77□□□□□ -1.49
ATP3YBR039W SIT4P20604 311 aa5.76□□□□□ -1.49
ATP3YBR039W SLY41P22215 453 aa5.76□□□□□ -1.49
ATP3YBR039W MET22P32179 357 aa5.76□□□□□ -1.49
ATP3YBR039W YMR196WQ04336 1088 aa5.76□□□□□ -1.49
ATP3YBR039W MET32Q12041 191 aa5.76□□□□□ -1.49
ATP3YBR039W AFT1P22149 690 aa5.73□□□□□ -1.49
ATP3YBR039W HXT10P43581 546 aa5.72□□□□□ -1.49
ATP3YBR039W FPK1P53739 893 aa5.72□□□□□ -1.49
ATP3YBR039W YDR444WQ04093 687 aa5.72□□□□□ -1.49
ATP3YBR039W ENV9Q08651 330 aa5.72□□□□□ -1.49
ATP3YBR039W TBF1Q02457 562 aa5.7□□□□□ -1.5
ATP3YBR039W SYH1Q02875 849 aaKnown RBP5.7□□□□□ -1.5
ATP3YBR039W PDC1P06169 563 aaKnown RBP5.69□□□□□ -1.5
ATP3YBR039W SCJ1P25303 377 aa5.69□□□□□ -1.5
ATP3YBR039W KIP2P28743 706 aa5.68□□□□□ -1.5
ATP3YBR039W RRD1P40454 393 aaKnown RBP5.68□□□□□ -1.5
ATP3YBR039W YJR115WP47152 169 aa5.68□□□□□ -1.5
ATP3YBR039W PUS6P53294 404 aa5.68□□□□□ -1.5
ATP3YBR039W ATF2P53296 535 aa5.68□□□□□ -1.5
ATP3YBR039W TPD3P31383 635 aa5.67□□□□□ -1.5
ATP3YBR039W ALR1Q08269 859 aa5.67□□□□□ -1.5
ATP3YBR039W LCB5Q06147 687 aaKnown RBP5.66□□□□□ -1.5
ATP3YBR039W YDL206WQ12424 762 aa5.66□□□□□ -1.5
ATP3YBR039W UGA3P26370 528 aa5.65□□□□□ -1.5
ATP3YBR039W RPA14P50106 137 aa5.65□□□□□ -1.5
ATP3YBR039W MMP1Q12372 583 aa5.65□□□□□ -1.5
ATP3YBR039W TRM1P15565 570 aaKnown RBP5.64□□□□□ -1.51
ATP3YBR039W IXR1P33417 597 aa5.64□□□□□ -1.51
ATP3YBR039W HST2P53686 357 aa5.63□□□□□ -1.51
ATP3YBR039W SRF1Q12516 437 aa5.63□□□□□ -1.51
ATP3YBR039W GLN1P32288 370 aaKnown RBP5.62□□□□□ -1.51
ATP3YBR039W MSB3P48566 633 aaPredicted RBP5.62□□□□□ -1.51
ATP3YBR039W YPR097WQ06839 1073 aa5.61□□□□□ -1.51
ATP3YBR039W ESS1P22696 170 aa5.6□□□□□ -1.51
ATP3YBR039W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
ATP3YBR039W GLC3P32775 704 aa5.59□□□□□ -1.51
ATP3YBR039W PTK2P47116 818 aaKnown RBP5.58□□□□□ -1.52
ATP3YBR039W TYW1Q08960 810 aaKnown RBP5.58□□□□□ -1.52
ATP3YBR039W YNR021WP53723 404 aaKnown RBP5.57□□□□□ -1.52
ATP3YBR039W YLR346CQ06139 101 aa5.57□□□□□ -1.52
ATP3YBR039W YDL176WQ12027 708 aa5.57□□□□□ -1.52
ATP3YBR039W YJU3P28321 313 aa5.56□□□□□ -1.52
ATP3YBR039W CAF120P53836 1060 aa5.55□□□□□ -1.52
ATP3YBR039W OPT2Q06593 877 aa5.55□□□□□ -1.52
ATP3YBR039W MRT4P33201 236 aaKnown RBP5.54□□□□□ -1.52
ATP3YBR039W PKH3Q03306 898 aaPredicted RBP5.53□□□□□ -1.52
ATP3YBR039W ARG8P18544 423 aa5.51□□□□□ -1.53
ATP3YBR039W VAC17P25591 423 aa5.51□□□□□ -1.53
ATP3YBR039W NUP85P46673 744 aa5.51□□□□□ -1.53
ATP3YBR039W RTT106P40161 455 aa5.5□□□□□ -1.53
ATP3YBR039W APP1P53933 587 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms