RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 DISP1Q96F81 1524 aa15.21■□□□□ 0.03
CLNS1A-204ENST00000525428 MRS2Q9HD23 443 aa15.21■□□□□ 0.03
CLNS1A-204ENST00000525428 FMN1Q68DA7 1419 aa15.2■□□□□ 0.02
CLNS1A-204ENST00000525428 EFCAB5A4FU69 1503 aa15.2■□□□□ 0.02
CLNS1A-204ENST00000525428 PRG4Q92954 1404 aaPredicted RBP15.19■□□□□ 0.02
CLNS1A-204ENST00000525428 TONSLQ96HA7 1378 aa15.19■□□□□ 0.02
CLNS1A-204ENST00000525428 CHD1O14646 1710 aa15.18■□□□□ 0.02
CLNS1A-204ENST00000525428 SAMD9Q5K651 1589 aa15.18■□□□□ 0.02
CLNS1A-204ENST00000525428 C11orf95C9JLR9 678 aaPredicted RBP15.18■□□□□ 0.02
CLNS1A-204ENST00000525428 AKNAQ7Z591 1439 aa15.17■□□□□ 0.02
CLNS1A-204ENST00000525428 CASKIN1Q8WXD9 1431 aa15.17■□□□□ 0.02
CLNS1A-204ENST00000525428 WASHC2CQ9Y4E1 1318 aa15.17■□□□□ 0.02
CLNS1A-204ENST00000525428 UGGT2Q9NYU1 1516 aa15.16■□□□□ 0.02
CLNS1A-204ENST00000525428 PLB1Q6P1J6 1458 aa15.16■□□□□ 0.02
CLNS1A-204ENST00000525428 USP35Q9P2H5 1018 aa15.15■□□□□ 0.02
CLNS1A-204ENST00000525428 GSE1Q14687 1217 aa15.15■□□□□ 0.02
CLNS1A-204ENST00000525428 MTUS2Q5JR59 1369 aa15.14■□□□□ 0.01
CLNS1A-204ENST00000525428 ZBED9Q6R2W3 1325 aa15.13■□□□□ 0.01
CLNS1A-204ENST00000525428 ERCC6L2Q5T890 1561 aa15.13■□□□□ 0.01
CLNS1A-204ENST00000525428 CDK13Q14004 1512 aaKnown RBP15.12■□□□□ 0.01
CLNS1A-204ENST00000525428 CARMIL2Q6F5E8 1435 aa15.12■□□□□ 0.01
CLNS1A-204ENST00000525428 PHLDB1Q86UU1 1377 aa15.12■□□□□ 0.01
CLNS1A-204ENST00000525428 KIAA0556O60303 1618 aa15.12■□□□□ 0.01
CLNS1A-204ENST00000525428 LRRC9Q6ZRR7 1453 aa15.11■□□□□ 0.01
CLNS1A-204ENST00000525428 TIAM1Q13009 1591 aa15.11■□□□□ 0.01
CLNS1A-204ENST00000525428 FYCO1Q9BQS8 1478 aa15.11■□□□□ 0.01
CLNS1A-204ENST00000525428 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
CLNS1A-204ENST00000525428 FRAT1Q92837 279 aaPredicted RBP15.11■□□□□ 0.01
CLNS1A-204ENST00000525428 PPM1GO15355 546 aaPredicted RBP15.1■□□□□ 0.01
CLNS1A-204ENST00000525428 SLC4A3P48751 1232 aa15.09■□□□□ 0.01
CLNS1A-204ENST00000525428 PTPRGP23470 1445 aa15.09■□□□□ 0.01
CLNS1A-204ENST00000525428 HSPA5P11021 654 aaKnown RBP15.09■□□□□ 0.01
CLNS1A-204ENST00000525428 PRKRIP1Q9H875 184 aaPredicted RBP15.07■□□□□ 0
CLNS1A-204ENST00000525428 PDE4AP27815 886 aa15.07■□□□□ 0
CLNS1A-204ENST00000525428 VSIG10Q8N0Z9 540 aa15.06■□□□□ 0
CLNS1A-204ENST00000525428 RSPH6AQ9H0K4 717 aa15.06■□□□□ 0
CLNS1A-204ENST00000525428 EPRSP07814 1512 aaKnown RBP15.05■□□□□ -0
CLNS1A-204ENST00000525428 NFKBIBQ15653 356 aa15.05■□□□□ -0
CLNS1A-204ENST00000525428 NUP153P49790 1475 aaKnown RBP15.04■□□□□ -0
CLNS1A-204ENST00000525428 MAGI3Q5TCQ9 1506 aa15.04■□□□□ -0
CLNS1A-204ENST00000525428 LRRIQ1Q96JM4 1722 aa15.04■□□□□ -0
CLNS1A-204ENST00000525428 SKAP1Q86WV1 359 aa15.02■□□□□ -0
CLNS1A-204ENST00000525428 ZMYND15Q9H091 742 aa15.01□□□□□ -0.01
CLNS1A-204ENST00000525428 NUDCQ9Y266 331 aa15.01□□□□□ -0.01
CLNS1A-204ENST00000525428 ZNF777Q9ULD5 760 aaPredicted RBP14.99□□□□□ -0.01
CLNS1A-204ENST00000525428 DCAF11Q8TEB1 546 aa14.99□□□□□ -0.01
CLNS1A-204ENST00000525428 ZNF644Q9H582 1327 aaPredicted RBP14.99□□□□□ -0.01
CLNS1A-204ENST00000525428 EIF4G2P78344 907 aaKnown RBP eCLIP14.98□□□□□ -0.01
CLNS1A-204ENST00000525428 BACH2Q9BYV9 841 aa14.98□□□□□ -0.01
CLNS1A-204ENST00000525428 DAXXQ9UER7 740 aaPredicted RBP14.98□□□□□ -0.01
CLNS1A-204ENST00000525428 GLIPR1L2Q4G1C9 344 aa14.98□□□□□ -0.01
CLNS1A-204ENST00000525428 EXOC6Q8TAG9 804 aa14.98□□□□□ -0.01
CLNS1A-204ENST00000525428 CHIC2Q9UKJ5 165 aa14.98□□□□□ -0.01
CLNS1A-204ENST00000525428 PLEKHD1A6NEE1 506 aa14.97□□□□□ -0.01
CLNS1A-204ENST00000525428 POLR3GLQ9BT43 218 aa14.97□□□□□ -0.01
CLNS1A-204ENST00000525428 MAP3K1Q13233 1512 aa14.97□□□□□ -0.01
CLNS1A-204ENST00000525428 NCOA2Q15596 1464 aa14.97□□□□□ -0.01
CLNS1A-204ENST00000525428 TCERG1O14776 1098 aaKnown RBP14.97□□□□□ -0.01
CLNS1A-204ENST00000525428 RAPGEF6Q8TEU7 1601 aa14.96□□□□□ -0.01
CLNS1A-204ENST00000525428 HECW1Q76N89 1606 aa14.96□□□□□ -0.02
CLNS1A-204ENST00000525428 CLASP1Q7Z460 1538 aa14.95□□□□□ -0.02
CLNS1A-204ENST00000525428 ATP10BO94823 1461 aa14.95□□□□□ -0.02
CLNS1A-204ENST00000525428 CFAP43Q8NDM7 1665 aa14.95□□□□□ -0.02
CLNS1A-204ENST00000525428 FAM43AQ8N2R8 423 aa14.94□□□□□ -0.02
CLNS1A-204ENST00000525428 SMG6Q86US8 1419 aaKnown RBP14.94□□□□□ -0.02
CLNS1A-204ENST00000525428 CNTLNQ9NXG0 1405 aa14.94□□□□□ -0.02
CLNS1A-204ENST00000525428 PLEKHG5O94827 1062 aa14.94□□□□□ -0.02
CLNS1A-204ENST00000525428 FRAT2O75474 233 aaPredicted RBP14.93□□□□□ -0.02
CLNS1A-204ENST00000525428 UACAQ9BZF9 1416 aa14.93□□□□□ -0.02
CLNS1A-204ENST00000525428 ARXQ96QS3 562 aa14.93□□□□□ -0.02
CLNS1A-204ENST00000525428 CYB5RLQ6IPT4 315 aa14.92□□□□□ -0.02
CLNS1A-204ENST00000525428 CCDC18Q5T9S5 1454 aa14.92□□□□□ -0.02
CLNS1A-204ENST00000525428 RNF123Q5XPI4 1314 aa14.9□□□□□ -0.02
CLNS1A-204ENST00000525428 FGD6Q6ZV73 1430 aa14.9□□□□□ -0.02
CLNS1A-204ENST00000525428 DDRGK1Q96HY6 314 aa14.9□□□□□ -0.02
CLNS1A-204ENST00000525428 SHROOM2Q13796 1616 aa14.89□□□□□ -0.03
CLNS1A-204ENST00000525428 ABCA8O94911 1581 aa14.89□□□□□ -0.03
CLNS1A-204ENST00000525428 RRP7BPQ9NSQ0 103 aa14.89□□□□□ -0.03
CLNS1A-204ENST00000525428 CFDP1Q9UEE9 299 aaPredicted RBP14.88□□□□□ -0.03
CLNS1A-204ENST00000525428 MYOM3Q5VTT5 1437 aa14.87□□□□□ -0.03
CLNS1A-204ENST00000525428 NAP1L5Q96NT1 182 aaPredicted RBP14.87□□□□□ -0.03
CLNS1A-204ENST00000525428 RRAGDQ9NQL2 400 aaPredicted RBP14.87□□□□□ -0.03
CLNS1A-204ENST00000525428 EHBP1L1Q8N3D4 1523 aa14.86□□□□□ -0.03
CLNS1A-204ENST00000525428 CCDC7Q96M83 1385 aa14.86□□□□□ -0.03
CLNS1A-204ENST00000525428 TROQ12816 1431 aaPredicted RBP14.86□□□□□ -0.03
CLNS1A-204ENST00000525428 PODXL2Q9NZ53 605 aa14.86□□□□□ -0.03
CLNS1A-204ENST00000525428 PTPRKQ15262 1439 aa14.86□□□□□ -0.03
CLNS1A-204ENST00000525428 RRP1P56182 461 aaKnown RBP14.85□□□□□ -0.03
CLNS1A-204ENST00000525428 HSP90AA2PQ14568 343 aaPredicted RBP14.83□□□□□ -0.03
CLNS1A-204ENST00000525428 KIF14Q15058 1648 aa14.83□□□□□ -0.04
CLNS1A-204ENST00000525428 MS4A1P11836 297 aa14.83□□□□□ -0.04
CLNS1A-204ENST00000525428 SUPT6HQ7KZ85 1726 aaKnown RBP14.82□□□□□ -0.04
CLNS1A-204ENST00000525428 PLIN1O60240 522 aa14.82□□□□□ -0.04
CLNS1A-204ENST00000525428 ARHGEF11O15085 1522 aa14.82□□□□□ -0.04
CLNS1A-204ENST00000525428 FOXD1Q16676 465 aa14.81□□□□□ -0.04
CLNS1A-204ENST00000525428 KIF7Q2M1P5 1343 aa14.81□□□□□ -0.04
CLNS1A-204ENST00000525428 ARID4BQ4LE39 1312 aaPredicted RBP14.81□□□□□ -0.04
CLNS1A-204ENST00000525428 HNRNPMP52272 730 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLNS1A-204ENST00000525428 TMC1Q8TDI8 760 aa14.81□□□□□ -0.04
CLNS1A-204ENST00000525428 L3MBTL2Q969R5 705 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms